RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 TFPIP10646 304 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 AKR1A1P14550 325 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 HRH2P25021 359 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 HTR2AP28223 471 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 PRDX2P32119 198 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 USP8P40818 1118 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 ALDH7A1P49419 539 aaKnown RBP3.84□□□□□ -1.8
SKP1-209ENST00000522552 SSTP61278 116 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 RPL23AP62750 156 aaKnown RBP3.84□□□□□ -1.8
SKP1-209ENST00000522552 CBX1P83916 185 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 UBE2V1Q13404 147 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 CUL3Q13618 768 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 GRM7Q14831 915 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 KRT31Q15323 416 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 ZRSR1Q15695 479 aaKnown RBP3.84□□□□□ -1.8
SKP1-209ENST00000522552 FSCBQ5H9T9 825 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 C10orf120Q5SQS8 335 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 LYSMD4Q5XG99 296 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 TTC19Q6DKK2 380 aaPredicted RBP3.84□□□□□ -1.8
SKP1-209ENST00000522552 ANKRD54Q6NXT1 300 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 CTR9Q6PD62 1173 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 FAM159AQ6UWV7 190 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 CCDC25Q86WR0 208 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 CDR2LQ86X02 465 aaPredicted RBP3.84□□□□□ -1.8
SKP1-209ENST00000522552 UBQLNLQ8IYU4 475 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 GCNT2Q8N0V5 402 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 ARFGAP2Q8N6H7 521 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 LINC01356Q8N9X3 169 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 TXNDC5Q8NBS9 432 aaKnown RBP3.84□□□□□ -1.8
SKP1-209ENST00000522552 PAPD5Q8NDF8 572 aaKnown RBP3.84□□□□□ -1.8
SKP1-209ENST00000522552 ADAMTS17Q8TE56 1095 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 FAM168AQ92567 244 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 NCLNQ969V3 563 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 BOD1Q96IK1 185 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 PGBD1Q96JS3 809 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 ZNF570Q96NI8 536 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 ANKRD27Q96NW4 1050 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 MMS19Q96T76 1030 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 ALOXE3Q9BYJ1 711 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 TRPV6Q9H1D0 765 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 MVB12BQ9H7P6 319 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 SYNDIG1Q9H7V2 258 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 ACTR5Q9H9F9 607 aaPredicted RBP3.84□□□□□ -1.8
SKP1-209ENST00000522552 GPR173Q9NS66 373 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 FAM120CQ9NX05 1096 aaKnown RBP3.84□□□□□ -1.8
SKP1-209ENST00000522552 DLL3Q9NYJ7 618 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 CISD1Q9NZ45 108 aaKnown RBP3.84□□□□□ -1.8
SKP1-209ENST00000522552 COPS7AQ9UBW8 275 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 PLEKHB1Q9UF11 243 aaPredicted RBP3.84□□□□□ -1.8
SKP1-209ENST00000522552 NFE2L3Q9Y4A8 694 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 GMEB1Q9Y692 573 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.84□□□□□ -1.8
SKP1-209ENST00000522552 STON1Q9Y6Q2 735 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 AKNAQ7Z591 1439 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 BRD4O60885 1362 aaPredicted RBP3.83□□□□□ -1.8
SKP1-209ENST00000522552 EMSYQ7Z589 1322 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 MAGEB16A2A368 324 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 MBLAC1A4D2B0 266 aaPredicted RBP3.83□□□□□ -1.8
SKP1-209ENST00000522552 OR6C74A6NCV1 312 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 NEMP2A6NFY4 417 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 ANKRD66B4E2M5 251 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 DIRC3C9JPN6 131 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 PRSS46E5RG02 174 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 RNMTO43148 476 aaKnown RBP3.83□□□□□ -1.8
SKP1-209ENST00000522552 PAX4O43316 350 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 RANBP6O60518 1105 aaKnown RBP3.83□□□□□ -1.8
SKP1-209ENST00000522552 RGS11O94810 467 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 TMCC1O94876 653 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 STBD1O95210 358 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 MBD3O95983 291 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 GAS8O95995 478 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 MOCS2O96007 188 aaPredicted RBP3.83□□□□□ -1.8
SKP1-209ENST00000522552 CSTAP01040 98 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 MT-ND1P03886 318 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 CA3P07451 260 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 CHRNGP07510 517 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 CCDC172P0C7W6 258 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 ERVK-10P10266 1014 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 CYP2D6P10635 497 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 ODC1P11926 461 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 NEFHP12036 1026 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 EPCAMP16422 314 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 ENGP17813 658 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 FBLP22087 321 aaKnown RBP3.83□□□□□ -1.8
SKP1-209ENST00000522552 DDX6P26196 483 aaKnown RBP eCLIP3.83□□□□□ -1.8
SKP1-209ENST00000522552 PCSK6P29122 969 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 CHI3L1P36222 383 aaPredicted RBP3.83□□□□□ -1.8
SKP1-209ENST00000522552 SYKP43405 635 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 RAP1GAPP47736 663 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 GPR12P47775 334 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 FNTAP49354 379 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 NXPH1P58417 271 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 CCZ1BP86790 482 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 CCZ1P86791 482 aaPredicted RBP3.83□□□□□ -1.8
SKP1-209ENST00000522552 DLX2Q07687 328 aaPredicted RBP3.83□□□□□ -1.8
SKP1-209ENST00000522552 BST1Q10588 318 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 CUL1Q13616 776 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 PKP1Q13835 747 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 IL18Q14116 193 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 KPNB1Q14974 876 aaKnown RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms