RNA–Protein interactions for RNA: ENST00000522115.6

PTPN12-215, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 5

Gene PTPN12, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-215	ENST00000522115	KRTAP5-1	Q6L8H4	278 aa		3.56	□□□□□ -1.84
PTPN12-215	ENST00000522115	ZNF519	Q8TB69	540 aa		3.56	□□□□□ -1.84
PTPN12-215	ENST00000522115	FAM222B	Q8WU58	562 aa		3.56	□□□□□ -1.84
PTPN12-215	ENST00000522115	ROBO4	Q8WZ75	1007 aa		3.56	□□□□□ -1.84
PTPN12-215	ENST00000522115	HDAC11	Q96DB2	347 aa		3.56	□□□□□ -1.84
PTPN12-215	ENST00000522115	SPAG5	Q96R06	1193 aa		3.56	□□□□□ -1.84
PTPN12-215	ENST00000522115	SLF1	Q9BQI6	1058 aa		3.56	□□□□□ -1.84
PTPN12-215	ENST00000522115	PIGQ	Q9BRB3	760 aa		3.56	□□□□□ -1.84
PTPN12-215	ENST00000522115	UPF3A	Q9H1J1	476 aa	Known RBP	3.56	□□□□□ -1.84
PTPN12-215	ENST00000522115	RNF150	Q9ULK6	438 aa		3.56	□□□□□ -1.84
PTPN12-215	ENST00000522115	MAGEC1	O60732	1142 aa		3.55	□□□□□ -1.84
PTPN12-215	ENST00000522115	ATP6AP2	O75787	350 aa		3.55	□□□□□ -1.84
PTPN12-215	ENST00000522115	CELF2	O95319	508 aa	Known RBP	3.55	□□□□□ -1.84
PTPN12-215	ENST00000522115	FYN	P06241	537 aa		3.55	□□□□□ -1.84
PTPN12-215	ENST00000522115	CYP11B2	P19099	503 aa		3.55	□□□□□ -1.84
PTPN12-215	ENST00000522115	RAD52	P43351	418 aa		3.55	□□□□□ -1.84
PTPN12-215	ENST00000522115	TSFM	P43897	325 aa	Known RBP	3.55	□□□□□ -1.84
PTPN12-215	ENST00000522115	RAB28	P51157	221 aa		3.55	□□□□□ -1.84
PTPN12-215	ENST00000522115	TMEM50B	P56557	158 aa		3.55	□□□□□ -1.84
PTPN12-215	ENST00000522115	MYL7	Q01449	175 aa		3.55	□□□□□ -1.84
PTPN12-215	ENST00000522115	TRAP1	Q12931	704 aa	Known RBP	3.55	□□□□□ -1.84
PTPN12-215	ENST00000522115	SRSF9	Q13242	221 aa	Known RBP eCLIP	3.55	□□□□□ -1.84
PTPN12-215	ENST00000522115	LY6D	Q14210	128 aa		3.55	□□□□□ -1.84
PTPN12-215	ENST00000522115	TAB1	Q15750	504 aa		3.55	□□□□□ -1.84
PTPN12-215	ENST00000522115	EXT1	Q16394	746 aa		3.55	□□□□□ -1.84
PTPN12-215	ENST00000522115	GPR33	Q49SQ1	333 aa		3.55	□□□□□ -1.84
PTPN12-215	ENST00000522115	TAF1B	Q53T94	588 aa	Predicted RBP	3.55	□□□□□ -1.84
PTPN12-215	ENST00000522115	C16orf54	Q6UWD8	224 aa		3.55	□□□□□ -1.84
PTPN12-215	ENST00000522115	FRRS1	Q6ZNA5	592 aa		3.55	□□□□□ -1.84
PTPN12-215	ENST00000522115	CATSPERD	Q86XM0	798 aa		3.55	□□□□□ -1.84
PTPN12-215	ENST00000522115	RYBP	Q8N488	228 aa	Predicted RBP	3.55	□□□□□ -1.84
PTPN12-215	ENST00000522115	FAM89B	Q8N5H3	189 aa		3.55	□□□□□ -1.84
PTPN12-215	ENST00000522115	NOA1	Q8NC60	698 aa	Known RBP	3.55	□□□□□ -1.84
PTPN12-215	ENST00000522115	SLC37A3	Q8NCC5	494 aa		3.55	□□□□□ -1.84
PTPN12-215	ENST00000522115	PGAP3	Q96FM1	320 aa	Predicted RBP	3.55	□□□□□ -1.84
PTPN12-215	ENST00000522115	NECTIN4	Q96NY8	510 aa		3.55	□□□□□ -1.84
PTPN12-215	ENST00000522115	DGCR6L	Q9BY27	220 aa		3.55	□□□□□ -1.84
PTPN12-215	ENST00000522115	GSN-AS1	Q9NRJ2	163 aa		3.55	□□□□□ -1.84
PTPN12-215	ENST00000522115	CHKB	Q9Y259	395 aa		3.55	□□□□□ -1.84
PTPN12-215	ENST00000522115	BICRA	Q9NZM4	1560 aa		3.55	□□□□□ -1.84
PTPN12-215	ENST00000522115	IGHV3OR16-10	A0A075B7F0	116 aa		3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115		A0A087WUV0	522 aa	Predicted RBP	3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115	UBE2C	O00762	179 aa		3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115	MYBL1	P10243	752 aa		3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115	GATA1	P15976	413 aa	Predicted RBP	3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115	RPL35A	P18077	110 aa	Known RBP	3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115	PRKACG	P22612	351 aa		3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115	LHCGR	P22888	699 aa		3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115	TLX1	P31314	330 aa	Predicted RBP	3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115	MC5R	P33032	325 aa		3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115	RBPJ	Q06330	500 aa		3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115	AIMP1	Q12904	312 aa	Known RBP	3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115	CALCOCO2	Q13137	446 aa		3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115	E2F5	Q15329	346 aa		3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115	KYNU	Q16719	465 aa		3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115	MTHFSD	Q2M296	383 aa	Known RBP	3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115	KRT71	Q3SY84	523 aa		3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115	MOGAT2	Q3SYC2	334 aa		3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115	LCE3C	Q5T5A8	94 aa		3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115	CST9LP1	Q5W188	147 aa		3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115	KIF6	Q6ZMV9	814 aa		3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115	ZBTB49	Q6ZSB9	765 aa		3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115	NUP37	Q8NFH4	326 aa		3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115	OR7A2P	Q8NGA2	310 aa		3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115	OR5T2	Q8NGG2	359 aa		3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115	ZNF486	Q96H40	463 aa	Predicted RBP	3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115	OVOL2	Q9BRP0	275 aa		3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115	LRRC61	Q9BV99	259 aa		3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115	TDRD1	Q9BXT4	1180 aa	Known RBP	3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115	PRRG4	Q9BZD6	226 aa		3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115	HOXD1	Q9GZZ0	328 aa		3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115	DNAJC4	Q9NNZ3	241 aa		3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115	ANKEF1	Q9NU02	776 aa		3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115	PANK4	Q9NVE7	773 aa		3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115	NDE1	Q9NXR1	346 aa		3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115	TXNDC16	Q9P2K2	825 aa		3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115	TTLL3	Q9Y4R7	772 aa		3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115	SMAD5-AS1	Q9Y6J3	95 aa		3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115	CSNK1G3	Q9Y6M4	447 aa		3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115		R4GN57	208 aa		3.54	□□□□□ -1.84
PTPN12-215	ENST00000522115	LOC105371242	A0A075B767	164 aa		3.53	□□□□□ -1.84
PTPN12-215	ENST00000522115		A0A1W2PPR1	153 aa		3.53	□□□□□ -1.84
PTPN12-215	ENST00000522115	PI15	O43692	258 aa		3.53	□□□□□ -1.84
PTPN12-215	ENST00000522115	SNX3	O60493	162 aa		3.53	□□□□□ -1.84
PTPN12-215	ENST00000522115	TADA2A	O75478	443 aa		3.53	□□□□□ -1.84
PTPN12-215	ENST00000522115	IGHE	P01854	428 aa		3.53	□□□□□ -1.84
PTPN12-215	ENST00000522115	ACHE	P22303	614 aa		3.53	□□□□□ -1.84
PTPN12-215	ENST00000522115	CD27	P26842	260 aa		3.53	□□□□□ -1.84
PTPN12-215	ENST00000522115	DNA2	P51530	1060 aa		3.53	□□□□□ -1.84
PTPN12-215	ENST00000522115	SLC8A3	P57103	927 aa		3.53	□□□□□ -1.84
PTPN12-215	ENST00000522115	DSCR10	P59022	87 aa		3.53	□□□□□ -1.84
PTPN12-215	ENST00000522115	DLK1	P80370	383 aa		3.53	□□□□□ -1.84
PTPN12-215	ENST00000522115	ACSM1	Q08AH1	577 aa		3.53	□□□□□ -1.84
PTPN12-215	ENST00000522115	TRIM29	Q14134	588 aa		3.53	□□□□□ -1.84
PTPN12-215	ENST00000522115	TMEM266	Q2M3C6	531 aa		3.53	□□□□□ -1.84
PTPN12-215	ENST00000522115	NOTUM	Q6P988	496 aa		3.53	□□□□□ -1.84
PTPN12-215	ENST00000522115	FCRLA	Q7L513	359 aa		3.53	□□□□□ -1.84
PTPN12-215	ENST00000522115	PI4KAP1	Q8N8J0	262 aa		3.53	□□□□□ -1.84
PTPN12-215	ENST00000522115	PIK3R3	Q92569	461 aa		3.53	□□□□□ -1.84
PTPN12-215	ENST00000522115	SPSB1	Q96BD6	273 aa		3.53	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms