RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 AHSA2Q719I0 299 aa15.78■□□□□ 0.12
USP42-207ENST00000521713 STX12Q86Y82 276 aa15.78■□□□□ 0.12
USP42-207ENST00000521713 DENND1AQ8TEH3 1009 aa15.78■□□□□ 0.12
USP42-207ENST00000521713 MTERF1Q99551 399 aaKnown RBP15.78■□□□□ 0.12
USP42-207ENST00000521713 C12orf65Q9H3J6 166 aaKnown RBP15.78■□□□□ 0.12
USP42-207ENST00000521713 ACSS2Q9NR19 701 aa15.78■□□□□ 0.12
USP42-207ENST00000521713 PKD1L3Q7Z443 1732 aa15.78■□□□□ 0.12
USP42-207ENST00000521713 MAGEB17A8MXT2 336 aa15.78■□□□□ 0.12
USP42-207ENST00000521713 SRPRAP08240 638 aaKnown RBP15.78■□□□□ 0.12
USP42-207ENST00000521713 WDR4P57081 412 aaKnown RBP15.78■□□□□ 0.12
USP42-207ENST00000521713 RPS21P63220 83 aaKnown RBP15.78■□□□□ 0.12
USP42-207ENST00000521713 CLDN10P78369 228 aa15.78■□□□□ 0.12
USP42-207ENST00000521713 SMCO1Q147U7 214 aa15.78■□□□□ 0.12
USP42-207ENST00000521713 ANKRA2Q9H9E1 313 aa15.78■□□□□ 0.12
USP42-207ENST00000521713 ZNF282Q9UDV7 671 aaPredicted RBP15.78■□□□□ 0.12
USP42-207ENST00000521713 OAS1P00973 400 aaKnown RBP15.78■□□□□ 0.12
USP42-207ENST00000521713 NRLP54845 237 aa15.78■□□□□ 0.12
USP42-207ENST00000521713 FBXO42Q6P3S6 717 aa15.78■□□□□ 0.12
USP42-207ENST00000521713 KBTBD7Q8WVZ9 684 aa15.78■□□□□ 0.12
USP42-207ENST00000521713 RGMAQ96B86 450 aa15.78■□□□□ 0.12
USP42-207ENST00000521713 GAL3ST4Q96RP7 486 aa15.78■□□□□ 0.12
USP42-207ENST00000521713 STRA6Q9BX79 667 aa15.78■□□□□ 0.12
USP42-207ENST00000521713 EBPLQ9BY08 206 aa15.78■□□□□ 0.12
USP42-207ENST00000521713 MLXQ9UH92 298 aa15.78■□□□□ 0.12
USP42-207ENST00000521713 CCDC88AQ3V6T2 1871 aa15.78■□□□□ 0.12
USP42-207ENST00000521713 EFCAB9A8MZ26 197 aa15.77■□□□□ 0.12
USP42-207ENST00000521713 TBX1O43435 398 aa15.77■□□□□ 0.12
USP42-207ENST00000521713 PCDH7O60245 1069 aa15.77■□□□□ 0.12
USP42-207ENST00000521713 ECI2O75521 394 aa15.77■□□□□ 0.12
USP42-207ENST00000521713 LEFTY1O75610 366 aa15.77■□□□□ 0.12
USP42-207ENST00000521713 ZNF8P17098 575 aaPredicted RBP15.77■□□□□ 0.12
USP42-207ENST00000521713 RPP38P78345 283 aaKnown RBP15.77■□□□□ 0.12
USP42-207ENST00000521713 HSPB3Q12988 150 aa15.77■□□□□ 0.12
USP42-207ENST00000521713 SP140Q13342 867 aa15.77■□□□□ 0.12
USP42-207ENST00000521713 RUNX3Q13761 415 aa15.77■□□□□ 0.12
USP42-207ENST00000521713 DHCR24Q15392 516 aa15.77■□□□□ 0.12
USP42-207ENST00000521713 DCUN1D3Q8IWE4 304 aa15.77■□□□□ 0.12
USP42-207ENST00000521713 NXPE1Q8N323 547 aa15.77■□□□□ 0.12
USP42-207ENST00000521713 NLE1Q9NVX2 485 aaPredicted RBP15.77■□□□□ 0.12
USP42-207ENST00000521713 FKBP14Q9NWM8 211 aa15.77■□□□□ 0.12
USP42-207ENST00000521713 VPS29Q9UBQ0 182 aa15.77■□□□□ 0.12
USP42-207ENST00000521713 PCDHGA3Q9Y5H0 932 aa15.77■□□□□ 0.12
USP42-207ENST00000521713 TMEM189-UBE2V1I3L0A0 370 aa15.77■□□□□ 0.12
USP42-207ENST00000521713 MPIP34949 423 aa15.77■□□□□ 0.12
USP42-207ENST00000521713 CLLU1OSQ5K130 101 aa15.77■□□□□ 0.12
USP42-207ENST00000521713 C1orf220Q5T0J3 134 aa15.77■□□□□ 0.12
USP42-207ENST00000521713 Q6ZVL8 140 aa15.77■□□□□ 0.12
USP42-207ENST00000521713 TMEM145Q8NBT3 493 aa15.77■□□□□ 0.12
USP42-207ENST00000521713 OR5K1Q8NHB7 308 aa15.77■□□□□ 0.12
USP42-207ENST00000521713 CMTM7Q96FZ5 175 aa15.77■□□□□ 0.12
USP42-207ENST00000521713 GPR22Q99680 433 aa15.77■□□□□ 0.12
USP42-207ENST00000521713 SLC29A3Q9BZD2 475 aa15.77■□□□□ 0.12
USP42-207ENST00000521713 KCNN2Q9H2S1 579 aa15.77■□□□□ 0.12
USP42-207ENST00000521713 ACSL5Q9ULC5 683 aa15.77■□□□□ 0.12
USP42-207ENST00000521713 MLLT3P42568 568 aaPredicted RBP15.77■□□□□ 0.11
USP42-207ENST00000521713 ERVK-8P63133 956 aa15.77■□□□□ 0.11
USP42-207ENST00000521713 NFKB2Q00653 900 aa15.77■□□□□ 0.11
USP42-207ENST00000521713 ZNF730Q6ZMV8 503 aa15.77■□□□□ 0.11
USP42-207ENST00000521713 PARP8Q8N3A8 854 aa15.77■□□□□ 0.11
USP42-207ENST00000521713 OR10H5Q8NGA6 315 aa15.77■□□□□ 0.11
USP42-207ENST00000521713 SLC38A4Q969I6 547 aa15.77■□□□□ 0.11
USP42-207ENST00000521713 ITPKCQ96DU7 683 aa15.77■□□□□ 0.11
USP42-207ENST00000521713 NKX1-2Q9UD57 310 aaPredicted RBP15.77■□□□□ 0.11
USP42-207ENST00000521713 SUSD2Q9UGT4 822 aa15.77■□□□□ 0.11
USP42-207ENST00000521713 DUXAA6NLW8 204 aa15.77■□□□□ 0.11
USP42-207ENST00000521713 FADS2P1A8MWK0 482 aa15.77■□□□□ 0.11
USP42-207ENST00000521713 RFPL2O75678 378 aa15.77■□□□□ 0.11
USP42-207ENST00000521713 AHSGP02765 367 aa15.77■□□□□ 0.11
USP42-207ENST00000521713 PEPDP12955 493 aa15.77■□□□□ 0.11
USP42-207ENST00000521713 PRPS1L1P21108 318 aa15.77■□□□□ 0.11
USP42-207ENST00000521713 SEMA3AQ14563 771 aa15.77■□□□□ 0.11
USP42-207ENST00000521713 PTGES3Q15185 160 aaKnown RBP15.77■□□□□ 0.11
USP42-207ENST00000521713 UTS2BQ765I0 119 aa15.77■□□□□ 0.11
USP42-207ENST00000521713 LAPTM4BQ86VI4 370 aa15.77■□□□□ 0.11
USP42-207ENST00000521713 PRSS58Q8IYP2 241 aa15.77■□□□□ 0.11
USP42-207ENST00000521713 SLC39A11Q8N1S5 342 aa15.77■□□□□ 0.11
USP42-207ENST00000521713 VANGL1Q8TAA9 524 aaPredicted RBP15.77■□□□□ 0.11
USP42-207ENST00000521713 SLC13A3Q8WWT9 602 aa15.77■□□□□ 0.11
USP42-207ENST00000521713 DUSP26Q9BV47 211 aa15.77■□□□□ 0.11
USP42-207ENST00000521713 RASSF1Q9NS23 344 aa15.77■□□□□ 0.11
USP42-207ENST00000521713 OXSMQ9NWU1 459 aa15.77■□□□□ 0.11
USP42-207ENST00000521713 TEX264Q9Y6I9 313 aa15.77■□□□□ 0.11
USP42-207ENST00000521713 LCHNA4D1U4 455 aa15.76■□□□□ 0.11
USP42-207ENST00000521713 C2orf78A6NCI8 922 aa15.76■□□□□ 0.11
USP42-207ENST00000521713 MEIS3P2A8K0S8 358 aa15.76■□□□□ 0.11
USP42-207ENST00000521713 STX16-NPEPL1H3BU86 382 aa15.76■□□□□ 0.11
USP42-207ENST00000521713 STX16O14662 325 aa15.76■□□□□ 0.11
USP42-207ENST00000521713 CSNK2A2P19784 350 aaPredicted RBP15.76■□□□□ 0.11
USP42-207ENST00000521713 AOC1P19801 751 aa15.76■□□□□ 0.11
USP42-207ENST00000521713 KCNJ9Q92806 393 aa15.76■□□□□ 0.11
USP42-207ENST00000521713 PYCR2Q96C36 320 aa15.76■□□□□ 0.11
USP42-207ENST00000521713 SLC35G5Q96KT7 338 aa15.76■□□□□ 0.11
USP42-207ENST00000521713 AASSQ9UDR5 926 aa15.76■□□□□ 0.11
USP42-207ENST00000521713 RGS17Q9UGC6 210 aaPredicted RBP15.76■□□□□ 0.11
USP42-207ENST00000521713 CNOT6Q9ULM6 557 aaKnown RBP15.76■□□□□ 0.11
USP42-207ENST00000521713 TRIM64CA6NLI5 447 aa15.76■□□□□ 0.11
USP42-207ENST00000521713 IL12BP29460 328 aa15.76■□□□□ 0.11
USP42-207ENST00000521713 CTSOP43234 321 aaPredicted RBP15.76■□□□□ 0.11
USP42-207ENST00000521713 SWI5Q1ZZU3 235 aa15.76■□□□□ 0.11
USP42-207ENST00000521713 SPATS1Q496A3 300 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms