RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 PHC1P78364 1004 aa17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 ACSM2AQ08AH3 577 aa17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 CCDC85BQ15834 202 aaPredicted RBP17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 PAGE2BQ5JRK9 111 aa17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 ACSM2BQ68CK6 577 aa17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 ADNP2Q6IQ32 1131 aa17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 PROSER1Q86XN7 944 aa17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 TICAM1Q8IUC6 712 aa17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 SYT12Q8IV01 421 aa17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 OR5K2Q8NHB8 316 aa17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 SETD7Q8WTS6 366 aaKnown RBP17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 SLC5A11Q8WWX8 675 aa17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 IL17FQ96PD4 163 aa17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 C1QTNF7Q9BXJ2 289 aa17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 RMND5AQ9H871 391 aa17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 CD207Q9UJ71 328 aa17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 SCML1Q9UN30 329 aa17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 TDRKHQ9Y2W6 561 aaKnown RBP17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 PCDHB3Q9Y5E6 796 aa17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 PRMT3O60678 531 aa17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 MYO1DO94832 1006 aa17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 LRATO95237 230 aa17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 ETHE1O95571 254 aa17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 NCK1P16333 377 aa17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 POU3F3P20264 500 aaPredicted RBP17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 PRPS1L1P21108 318 aa17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 DRD1P21728 446 aa17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 PSMA4P25789 261 aaKnown RBP17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 OR4D2P58180 307 aa17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 KLC1Q07866 573 aa17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 GRSF1Q12849 480 aaKnown RBP eCLIP17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 SLBPQ14493 270 aaKnown RBP eCLIP17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 C10orf62Q5T681 223 aaPredicted RBP17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 THEMIS2Q5TEJ8 643 aa17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 HORMAD1Q86X24 394 aa17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 C11orf24Q96F05 449 aaPredicted RBP17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 HHIPQ96QV1 700 aa17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 KCNH6Q9H252 994 aa17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 PIF1Q9H611 641 aa17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 PREBQ9HCU5 417 aa17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 PRM3Q9NNZ6 103 aa17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 GEMIN8Q9NWZ8 242 aaKnown RBP17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 PLAGL1Q9UM63 463 aa17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 USP22Q9UPT9 525 aa17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 MAN2B2Q9Y2E5 1009 aa17.84■□□□□ 0.45
TRAPPC9-210ENST00000521667 TBC1D3DA0A087WVF3 549 aa17.83■□□□□ 0.45
TRAPPC9-210ENST00000521667 TBC1D3IA0A087WXS9 549 aa17.83■□□□□ 0.45
TRAPPC9-210ENST00000521667 TBC1D3EA0A087X179 549 aa17.83■□□□□ 0.45
TRAPPC9-210ENST00000521667 TBC1D3KA0A087X1G2 549 aa17.83■□□□□ 0.45
TRAPPC9-210ENST00000521667 TBC1D3FA6NER0 549 aaPredicted RBP17.83■□□□□ 0.45
TRAPPC9-210ENST00000521667 VGLL3A8MV65 326 aa17.83■□□□□ 0.45
TRAPPC9-210ENST00000521667 TBC1D3LB9A6J9 549 aa17.83■□□□□ 0.45
TRAPPC9-210ENST00000521667 ERN1O75460 977 aaKnown RBP17.83■□□□□ 0.45
TRAPPC9-210ENST00000521667 SLC35G4P0C7Q5 338 aa17.83■□□□□ 0.45
TRAPPC9-210ENST00000521667 TBC1D3HP0C7X1 549 aa17.83■□□□□ 0.45
TRAPPC9-210ENST00000521667 DMPKQ09013 629 aa17.83■□□□□ 0.45
TRAPPC9-210ENST00000521667 HIST2H2ACQ16777 129 aaPredicted RBP17.83■□□□□ 0.45
TRAPPC9-210ENST00000521667 PGS1Q32NB8 556 aa17.83■□□□□ 0.45
TRAPPC9-210ENST00000521667 PRAMEF14Q5SWL7 426 aa17.83■□□□□ 0.45
TRAPPC9-210ENST00000521667 PRAMEF13Q5VWM6 474 aa17.83■□□□□ 0.45
TRAPPC9-210ENST00000521667 TBC1D3GQ6DHY5 549 aa17.83■□□□□ 0.45
TRAPPC9-210ENST00000521667 HIST2H2AA3Q6FI13 130 aa17.83■□□□□ 0.45
TRAPPC9-210ENST00000521667 TBC1D3CQ6IPX1 549 aa17.83■□□□□ 0.45
TRAPPC9-210ENST00000521667 NXPE4Q6UWF7 544 aa17.83■□□□□ 0.45
TRAPPC9-210ENST00000521667 DNAJC14Q6Y2X3 702 aaPredicted RBP17.83■□□□□ 0.45
TRAPPC9-210ENST00000521667 CHST15Q7LFX5 561 aaPredicted RBP17.83■□□□□ 0.45
TRAPPC9-210ENST00000521667 MSRB3Q8IXL7 192 aa17.83■□□□□ 0.45
TRAPPC9-210ENST00000521667 LAS2Q8IYD9 372 aa17.83■□□□□ 0.45
TRAPPC9-210ENST00000521667 TBC1D3Q8IZP1 549 aaPredicted RBP17.83■□□□□ 0.45
TRAPPC9-210ENST00000521667 ITCHQ96J02 903 aa17.83■□□□□ 0.45
TRAPPC9-210ENST00000521667 BTBD9Q96Q07 612 aa17.83■□□□□ 0.45
TRAPPC9-210ENST00000521667 SH3GL1Q99961 368 aa17.83■□□□□ 0.45
TRAPPC9-210ENST00000521667 C8orf33Q9H7E9 229 aaPredicted RBP17.83■□□□□ 0.45
TRAPPC9-210ENST00000521667 SLC25A37Q9NYZ2 338 aa17.83■□□□□ 0.45
TRAPPC9-210ENST00000521667 MAGEL2Q9UJ55 1249 aa17.83■□□□□ 0.45
TRAPPC9-210ENST00000521667 ACSL5Q9ULC5 683 aa17.83■□□□□ 0.45
TRAPPC9-210ENST00000521667 AURKCQ9UQB9 309 aa17.83■□□□□ 0.45
TRAPPC9-210ENST00000521667 TRBV5-3A0A0A0MS03 114 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 GPIP06744 558 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 ERGP11308 486 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 UQCRBP14927 111 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 IL10P22301 178 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 SOX11P35716 441 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 IGFALSP35858 605 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 CYP4F3Q08477 520 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 LAPTM5Q13571 262 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 ARHGAP19Q14CB8 494 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 DPY19L1Q2PZI1 675 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 RUNDC3AQ59EK9 446 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 TBCELQ5QJ74 424 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 LRIF1Q5T3J3 769 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 LCTLQ6UWM7 567 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 MSANTD1Q6ZTZ1 278 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 GPR180Q86V85 440 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 ADGRG5Q8IZF4 528 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 GFM2Q969S9 779 aaKnown RBP17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 SIPA1Q96FS4 1042 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 PAIP1Q9H074 479 aaKnown RBP17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 SEMA6AQ9H2E6 1030 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms