RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 SEPHS2Q99611 448 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 VN1R1Q9GZP7 353 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 CLSTN2Q9H4D0 955 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 BICC1Q9H694 974 aaKnown RBP3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 OPA3Q9H6K4 179 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 ANKZF1Q9H8Y5 726 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 TXLNGQ9NUQ3 528 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 HYPKQ9NX55 129 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 HAO2Q9NYQ3 351 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 CLIC5Q9NZA1 410 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 PTTG2Q9NZH5 202 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 OSGIN1Q9UJX0 560 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 TRPV2Q9Y5S1 764 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 ITSN1Q15811 1721 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 MED1Q15648 1581 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 TSPOAP1O95153 1857 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 DDX60Q8IY21 1712 aaKnown RBP3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 XRN1Q8IZH2 1706 aaKnown RBP3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 A0A0G2JLW4 131 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 TRBC2A0A5B9 178 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 HYKKA2RU49 373 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 CCDC69A6NI79 296 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 OR6C76A6NM76 312 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 SMIM1B2RUZ4 78 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 BLOC1S5-TXNDC5H3BN57 136 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 POLR3GO15318 223 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 STX6O43752 255 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 OR10H2O60403 315 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 SMC2O95347 1197 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 TRUB2O95900 331 aaKnown RBP3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 TPM1P09493 284 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 ACP2P11117 423 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 PSMA5P28066 241 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 EPHA2P29317 976 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 MTHFRP42898 656 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 CX3CL1P78423 397 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 PDIA5Q14554 519 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 IL11RAQ14626 422 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 CCDC6Q16204 474 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 ZC2HC1CQ53FD0 456 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 ERMARDQ5T6L9 678 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 SLC30A6Q6NXT4 461 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 CWC27Q6UX04 472 aaKnown RBP3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 TMPRSS11FQ6ZWK6 438 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 RUFY3Q7L099 469 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 DGLUCYQ7Z3D6 616 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 CAMKMTQ7Z624 323 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 TRPT1Q86TN4 253 aaKnown RBP3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 MAML2Q8IZL2 1156 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 OR8H2Q8N162 312 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 PI4KAP1Q8N8J0 262 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 GPATCH11Q8N954 259 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 TC2NQ8N9U0 490 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 OR10V1Q8NGI7 309 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 CCDC107Q8WV48 283 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 DUX3Q96PT4 197 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 OLFM1Q99784 485 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 RTP3Q9BQQ7 232 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 RHNO1Q9BSD3 238 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 PARD6BQ9BYG5 372 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 TXLNGYQ9BZA5 131 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 GPR88Q9GZN0 384 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 HSD3B7Q9H2F3 369 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 ARRDC1-AS1Q9H2J1 176 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 NOL11Q9H8H0 719 aaKnown RBP3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 OLAHQ9NV23 265 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 ADPRHL2Q9NX46 363 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 ZNF624Q9P2J8 865 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 LRRC37A3O60309 1634 aa3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 CEP170BQ9Y4F5 1589 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P41-201ENST00000520234 LAMA4Q16363 1823 aa3.03□□□□□ -1.93
HMGB1P41-201ENST00000520234 JCADQ9P266 1359 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 NOTCH3Q9UM47 2321 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 GRIN2DO15399 1336 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 PHRF1Q9P1Y6 1649 aaKnown RBP3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 EDDM13A0A1B0GTR0 161 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 A0A1W2PN81 502 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 TMEM221A6NGB7 291 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 DUXAA6NLW8 204 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 PMS2P5A8MQ11 134 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 TMCO5BA8MYB1 307 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 E9PI62 339 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 GAPDHSO14556 408 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 CLIC2O15247 247 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 LINC01565O15544 149 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 N4BP1O75113 896 aaKnown RBP3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 PRKRAO75569 313 aaKnown RBP3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 TOMM70O94826 608 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 PIGNO95427 931 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 TSHBP01222 138 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 NEFHP12036 1026 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 GCFC2P16383 781 aaKnown RBP3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 PAX7P23759 505 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 DNASE1P24855 282 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 EEF1DP29692 281 aaKnown RBP3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 KRT20P35900 424 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 CHRNA7P36544 502 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 CCNHP51946 323 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 PDX1P52945 283 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 TPD52P55327 224 aaPredicted RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms