RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 IL19Q9UHD0 177 aa4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 STUB1Q9UNE7 303 aa4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 KLK4Q9Y5K2 254 aa4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 IL16Q14005 1332 aa4.89□□□□□ -1.63
HMGB1P46-201ENST00000520062 LACTBL1A8MY62 500 aa4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 C2CD4DB7Z1M9 353 aa4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 NPIPA3F8WFD2 350 aa4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 SMAD6O43541 496 aaKnown RBP4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 PRKNO60260 465 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 ATP9AO75110 1047 aa4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 NME6O75414 186 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 DDHD2O94830 711 aa4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 APOHP02749 345 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 SERPING1P05155 500 aa4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 ALPLP05186 524 aa4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 HMOX1P09601 288 aa4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 CYP2A7P20853 494 aa4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 CDH3P22223 829 aa4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 CA6P23280 308 aa4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 EPHA2P29317 976 aa4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 FMO5P49326 533 aa4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 CLK1P49759 484 aaKnown RBP4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 ZNF132P52740 706 aa4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 STARD6P59095 220 aa4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 KEAP1Q14145 624 aa4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 SMC1AQ14683 1233 aaKnown RBP4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 UGP2Q16851 508 aa4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 HFEQ30201 348 aa4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 PDLIM3Q53GG5 364 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 SLC35D3Q5M8T2 416 aa4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 NADSYN1Q6IA69 706 aa4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 RABEPKQ7Z6M1 372 aa4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 AQP12AQ8IXF9 295 aa4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 CDK20Q8IZL9 346 aa4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 MAPKAPK5-AS1Q8N8E1 139 aa4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 TSACCQ96A04 125 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 CDKN2AIPNLQ96HQ2 116 aa4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 LYZL4Q96KX0 146 aa4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 C17orf62Q9BQA9 187 aa4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 SPXQ9BT56 116 aa4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 C6orf106Q9H6K1 298 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 PRMT8Q9NR22 394 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 PTTG2Q9NZH5 202 aa4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 HMG20BQ9P0W2 317 aa4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 MAD2L2Q9UI95 211 aa4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 ODF2LQ9ULJ1 636 aa4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 RUVBL2Q9Y230 463 aaKnown RBP4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 HBS1LQ9Y450 684 aaKnown RBP4.88□□□□□ -1.63
HMGB1P46-201ENST00000520062 EVPLQ92817 2033 aa4.87□□□□□ -1.63
HMGB1P46-201ENST00000520062 C17orf105B2RV13 164 aa4.87□□□□□ -1.63
HMGB1P46-201ENST00000520062 PRSS46E5RG02 174 aa4.87□□□□□ -1.63
HMGB1P46-201ENST00000520062 CACNB4O00305 520 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P46-201ENST00000520062 IGHV4-31P0DP07 118 aa4.87□□□□□ -1.63
HMGB1P46-201ENST00000520062 KRT3P12035 628 aa4.87□□□□□ -1.63
HMGB1P46-201ENST00000520062 TYMPP19971 482 aa4.87□□□□□ -1.63
HMGB1P46-201ENST00000520062 CSTF2P33240 577 aaKnown RBP eCLIP4.87□□□□□ -1.63
HMGB1P46-201ENST00000520062 SERPINB6P35237 376 aa4.87□□□□□ -1.63
HMGB1P46-201ENST00000520062 OR3A1P47881 315 aa4.87□□□□□ -1.63
HMGB1P46-201ENST00000520062 SERPINH1P50454 418 aaKnown RBP4.87□□□□□ -1.63
HMGB1P46-201ENST00000520062 BPIFB3P59826 476 aa4.87□□□□□ -1.63
HMGB1P46-201ENST00000520062 AKAP17AQ02040 695 aaKnown RBP4.87□□□□□ -1.63
HMGB1P46-201ENST00000520062 STXBP2Q15833 593 aa4.87□□□□□ -1.63
HMGB1P46-201ENST00000520062 ETFRF1Q6IPR1 90 aa4.87□□□□□ -1.63
HMGB1P46-201ENST00000520062 FUT10Q6P4F1 479 aa4.87□□□□□ -1.63
HMGB1P46-201ENST00000520062 GET4Q7L5D6 327 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P46-201ENST00000520062 PRSS42Q7Z5A4 293 aa4.87□□□□□ -1.63
HMGB1P46-201ENST00000520062 RBM23Q86U06 439 aaKnown RBP4.87□□□□□ -1.63
HMGB1P46-201ENST00000520062 SLC9B2Q86UD5 537 aa4.87□□□□□ -1.63
HMGB1P46-201ENST00000520062 NFE4Q86UQ8 179 aa4.87□□□□□ -1.63
HMGB1P46-201ENST00000520062 SFRP1Q8N474 314 aa4.87□□□□□ -1.63
HMGB1P46-201ENST00000520062 CCDC63Q8NA47 563 aa4.87□□□□□ -1.63
HMGB1P46-201ENST00000520062 VOPP1Q96AW1 172 aa4.87□□□□□ -1.63
HMGB1P46-201ENST00000520062 AP2M1Q96CW1 435 aa4.87□□□□□ -1.63
HMGB1P46-201ENST00000520062 NSL1Q96IY1 281 aa4.87□□□□□ -1.63
HMGB1P46-201ENST00000520062 TSSK2Q96PF2 358 aa4.87□□□□□ -1.63
HMGB1P46-201ENST00000520062 RASL10BQ96S79 203 aa4.87□□□□□ -1.63
HMGB1P46-201ENST00000520062 MEIS3Q99687 375 aa4.87□□□□□ -1.63
HMGB1P46-201ENST00000520062 ZPBPQ9BS86 351 aa4.87□□□□□ -1.63
HMGB1P46-201ENST00000520062 C1QTNF4Q9BXJ3 329 aa4.87□□□□□ -1.63
HMGB1P46-201ENST00000520062 TRIM7Q9C029 511 aa4.87□□□□□ -1.63
HMGB1P46-201ENST00000520062 TNMDQ9H2S6 317 aa4.87□□□□□ -1.63
HMGB1P46-201ENST00000520062 FAM207AQ9NSI2 230 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P46-201ENST00000520062 PDRG1Q9NUG6 133 aa4.87□□□□□ -1.63
HMGB1P46-201ENST00000520062 DNAJC11Q9NVH1 559 aa4.87□□□□□ -1.63
HMGB1P46-201ENST00000520062 NOCTQ9UK39 431 aaKnown RBP4.87□□□□□ -1.63
HMGB1P46-201ENST00000520062 A0A0A6YYC8 382 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P46-201ENST00000520062 PLSCR5A0PG75 271 aa4.86□□□□□ -1.63
HMGB1P46-201ENST00000520062 PRAC2D3DTV9 90 aa4.86□□□□□ -1.63
HMGB1P46-201ENST00000520062 I3L1I5 382 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P46-201ENST00000520062 INO80B-WBP1J3KQ70 363 aa4.86□□□□□ -1.63
HMGB1P46-201ENST00000520062 CAPN9O14815 690 aa4.86□□□□□ -1.63
HMGB1P46-201ENST00000520062 VEGFDO43915 354 aa4.86□□□□□ -1.63
HMGB1P46-201ENST00000520062 SEC22BO75396 215 aa4.86□□□□□ -1.63
HMGB1P46-201ENST00000520062 IL10P22301 178 aa4.86□□□□□ -1.63
HMGB1P46-201ENST00000520062 DGKAP23743 735 aa4.86□□□□□ -1.63
HMGB1P46-201ENST00000520062 NKX2-1P43699 371 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P46-201ENST00000520062 DVL1P1P54792 670 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P46-201ENST00000520062 CDH11P55287 796 aa4.86□□□□□ -1.63
HMGB1P46-201ENST00000520062 YBEYP58557 167 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P46-201ENST00000520062 HERV-K104P61576 105 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms