RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 GLRBP48167 497 aa11.86□□□□□ -0.51
CSMD1-205ENST00000519623 EMP3P54852 163 aa11.86□□□□□ -0.51
CSMD1-205ENST00000519623 PRDX1Q06830 199 aaKnown RBP11.86□□□□□ -0.51
CSMD1-205ENST00000519623 KLC1Q07866 573 aa11.86□□□□□ -0.51
CSMD1-205ENST00000519623 DHX34Q14147 1143 aaKnown RBP11.86□□□□□ -0.51
CSMD1-205ENST00000519623 RBBP7Q16576 425 aa11.86□□□□□ -0.51
CSMD1-205ENST00000519623 MUM1Q2TAK8 710 aa11.86□□□□□ -0.51
CSMD1-205ENST00000519623 TUBB8Q3ZCM7 444 aa11.86□□□□□ -0.51
CSMD1-205ENST00000519623 AGAP7PQ5VUJ5 663 aa11.86□□□□□ -0.51
CSMD1-205ENST00000519623 ZNF425Q6IV72 752 aa11.86□□□□□ -0.51
CSMD1-205ENST00000519623 CASC4Q6P4E1 433 aa11.86□□□□□ -0.51
CSMD1-205ENST00000519623 CYHR1Q6ZMK1 362 aa11.86□□□□□ -0.51
CSMD1-205ENST00000519623 NEK10Q6ZWH5 1172 aa11.86□□□□□ -0.51
CSMD1-205ENST00000519623 DENND6AQ8IWF6 608 aa11.86□□□□□ -0.51
CSMD1-205ENST00000519623 REXO1L1PQ8IX06 675 aa11.86□□□□□ -0.51
CSMD1-205ENST00000519623 AGGF1Q8N302 714 aaeCLIP11.86□□□□□ -0.512e-8■■■■■ 30.6
CSMD1-205ENST00000519623 RASGEF1CQ8N431 466 aa11.86□□□□□ -0.51
CSMD1-205ENST00000519623 ARHGEF39Q8N4T4 335 aa11.86□□□□□ -0.51
CSMD1-205ENST00000519623 FBXO15Q8NCQ5 510 aaPredicted RBP11.86□□□□□ -0.51
CSMD1-205ENST00000519623 GIMAP7Q8NHV1 300 aa11.86□□□□□ -0.51
CSMD1-205ENST00000519623 ASB11Q8WXH4 323 aa11.86□□□□□ -0.51
CSMD1-205ENST00000519623 MAGOHBQ96A72 148 aaKnown RBP11.86□□□□□ -0.51
CSMD1-205ENST00000519623 MS4A14Q96JA4 679 aa11.86□□□□□ -0.51
CSMD1-205ENST00000519623 AGAP4Q96P64 663 aa11.86□□□□□ -0.51
CSMD1-205ENST00000519623 OR2A5Q96R48 311 aa11.86□□□□□ -0.51
CSMD1-205ENST00000519623 LHPPQ9H008 270 aa11.86□□□□□ -0.51
CSMD1-205ENST00000519623 ILKAPQ9H0C8 392 aaPredicted RBP11.86□□□□□ -0.51
CSMD1-205ENST00000519623 MRPS30Q9NP92 439 aaKnown RBP11.86□□□□□ -0.51
CSMD1-205ENST00000519623 KLHL42Q9P2K6 505 aa11.86□□□□□ -0.51
CSMD1-205ENST00000519623 ZNF282Q9UDV7 671 aaPredicted RBP11.86□□□□□ -0.51
CSMD1-205ENST00000519623 VPS9D1Q9Y2B5 631 aa11.86□□□□□ -0.51
CSMD1-205ENST00000519623 PPP2R2CQ9Y2T4 447 aa11.86□□□□□ -0.51
CSMD1-205ENST00000519623 SVILO95425 2214 aa11.85□□□□□ -0.51
CSMD1-205ENST00000519623 E5RI56 91 aa11.85□□□□□ -0.51
CSMD1-205ENST00000519623 E7ENX8 843 aa11.85□□□□□ -0.51
CSMD1-205ENST00000519623 GFYI3L273 518 aa11.85□□□□□ -0.51
CSMD1-205ENST00000519623 USP1O94782 785 aa11.85□□□□□ -0.51
CSMD1-205ENST00000519623 KLHL18O94889 574 aa11.85□□□□□ -0.51
CSMD1-205ENST00000519623 DDAH2O95865 285 aa11.85□□□□□ -0.51
CSMD1-205ENST00000519623 SLC16A8O95907 504 aa11.85□□□□□ -0.51
CSMD1-205ENST00000519623 RPA3P35244 121 aaPredicted RBP11.85□□□□□ -0.51
CSMD1-205ENST00000519623 HSD17B2P37059 387 aa11.85□□□□□ -0.51
CSMD1-205ENST00000519623 COILP38432 576 aaPredicted RBP11.85□□□□□ -0.51
CSMD1-205ENST00000519623 MAGEA3P43357 314 aa11.85□□□□□ -0.51
CSMD1-205ENST00000519623 CARSP49589 748 aaKnown RBP11.85□□□□□ -0.51
CSMD1-205ENST00000519623 PNLIPRP1P54315 467 aa11.85□□□□□ -0.51
CSMD1-205ENST00000519623 TAP2Q03519 686 aa11.85□□□□□ -0.51
CSMD1-205ENST00000519623 RELAQ04206 551 aa11.85□□□□□ -0.51
CSMD1-205ENST00000519623 OCA2Q04671 838 aa11.85□□□□□ -0.51
CSMD1-205ENST00000519623 CTBP1Q13363 440 aa11.85□□□□□ -0.51
CSMD1-205ENST00000519623 NAA25Q14CX7 972 aa11.85□□□□□ -0.51
CSMD1-205ENST00000519623 VWA2Q5GFL6 755 aa11.85□□□□□ -0.51
CSMD1-205ENST00000519623 ICE2Q659A1 982 aa11.85□□□□□ -0.51
CSMD1-205ENST00000519623 ZNF470Q6ECI4 717 aa11.85□□□□□ -0.51
CSMD1-205ENST00000519623 LRRC56Q8IYG6 542 aaPredicted RBP11.85□□□□□ -0.51
CSMD1-205ENST00000519623 PRSS58Q8IYP2 241 aa11.85□□□□□ -0.51
CSMD1-205ENST00000519623 DNAJB14Q8TBM8 379 aa11.85□□□□□ -0.51
CSMD1-205ENST00000519623 PPP4R1Q8TF05 950 aa11.85□□□□□ -0.51
CSMD1-205ENST00000519623 ZNF480Q8WV37 535 aa11.85□□□□□ -0.51
CSMD1-205ENST00000519623 MIEF2Q96C03 454 aa11.85□□□□□ -0.51
CSMD1-205ENST00000519623 THOC3Q96J01 351 aaKnown RBP11.85□□□□□ -0.51
CSMD1-205ENST00000519623 SIGLEC10Q96LC7 697 aa11.85□□□□□ -0.51
CSMD1-205ENST00000519623 SERPINB12Q96P63 405 aa11.85□□□□□ -0.51
CSMD1-205ENST00000519623 WDR77Q9BQA1 342 aaPredicted RBP11.85□□□□□ -0.51
CSMD1-205ENST00000519623 CRB3Q9BUF7 120 aa11.85□□□□□ -0.51
CSMD1-205ENST00000519623 FAM114A2Q9NRY5 505 aa11.85□□□□□ -0.51
CSMD1-205ENST00000519623 SAMD15Q9P1V8 674 aa11.85□□□□□ -0.51
CSMD1-205ENST00000519623 ERRFI1Q9UJM3 462 aaPredicted RBP11.85□□□□□ -0.51
CSMD1-205ENST00000519623 C3orf18Q9UK00 162 aa11.85□□□□□ -0.51
CSMD1-205ENST00000519623 RUVBL1Q9Y265 456 aaKnown RBP11.85□□□□□ -0.51
CSMD1-205ENST00000519623 DHRS7Q9Y394 339 aa11.85□□□□□ -0.51
CSMD1-205ENST00000519623 ZGRF1Q86YA3 2104 aa11.84□□□□□ -0.51
CSMD1-205ENST00000519623 ITPR2Q14571 2701 aa11.84□□□□□ -0.51
CSMD1-205ENST00000519623 CACNA1DQ01668 2161 aa11.84□□□□□ -0.51
CSMD1-205ENST00000519623 CTAGE9A4FU28 777 aa11.84□□□□□ -0.51
CSMD1-205ENST00000519623 ANKUB1A6NFN9 424 aa11.84□□□□□ -0.51
CSMD1-205ENST00000519623 GOLGA8MH3BSY2 632 aa11.84□□□□□ -0.51
CSMD1-205ENST00000519623 PHF2O75151 1096 aa11.84□□□□□ -0.51
CSMD1-205ENST00000519623 HPP00738 406 aa11.84□□□□□ -0.51
CSMD1-205ENST00000519623 CATP04040 527 aaKnown RBP11.84□□□□□ -0.51
CSMD1-205ENST00000519623 SLC26A3P40879 764 aa11.84□□□□□ -0.51
CSMD1-205ENST00000519623 CUL1Q13616 776 aa11.84□□□□□ -0.51
CSMD1-205ENST00000519623 THOC5Q13769 683 aaKnown RBP11.84□□□□□ -0.51
CSMD1-205ENST00000519623 CYP1B1Q16678 543 aa11.84□□□□□ -0.51
CSMD1-205ENST00000519623 HKDC1Q2TB90 917 aa11.84□□□□□ -0.51
CSMD1-205ENST00000519623 KCNMB4Q86W47 210 aa11.84□□□□□ -0.51
CSMD1-205ENST00000519623 AMER3Q8N944 861 aa11.84□□□□□ -0.51
CSMD1-205ENST00000519623 PPFIBP2Q8ND30 876 aa11.84□□□□□ -0.51
CSMD1-205ENST00000519623 KCNJ9Q92806 393 aa11.84□□□□□ -0.51
CSMD1-205ENST00000519623 ZNF669Q96BR6 464 aaPredicted RBP11.84□□□□□ -0.51
CSMD1-205ENST00000519623 C8orf44Q96CB5 159 aa11.84□□□□□ -0.51
CSMD1-205ENST00000519623 VPS50Q96JG6 964 aa11.84□□□□□ -0.51
CSMD1-205ENST00000519623 PBKQ96KB5 322 aa11.84□□□□□ -0.51
CSMD1-205ENST00000519623 CABS1Q96KC9 395 aa11.84□□□□□ -0.51
CSMD1-205ENST00000519623 LMF1Q96S06 567 aa11.84□□□□□ -0.51
CSMD1-205ENST00000519623 XAB2Q9HCS7 855 aaKnown RBP11.84□□□□□ -0.51
CSMD1-205ENST00000519623 FBXO6Q9NRD1 293 aaPredicted RBP11.84□□□□□ -0.51
CSMD1-205ENST00000519623 TAC3Q9UHF0 121 aa11.84□□□□□ -0.51
CSMD1-205ENST00000519623 CDC14AQ9UNH5 594 aa11.84□□□□□ -0.51
CSMD1-205ENST00000519623 NOVA2Q9UNW9 492 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms