RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 PPP1R13LQ8WUF5 828 aa8.29□□□□□ -1.08
PCM1-212ENST00000519253 ASZ1Q8WWH4 475 aa8.29□□□□□ -1.08
PCM1-212ENST00000519253 FRG2BQ96QU4 278 aa8.29□□□□□ -1.08
PCM1-212ENST00000519253 CD244Q9BZW8 370 aa8.29□□□□□ -1.08
PCM1-212ENST00000519253 KLHL1Q9NR64 748 aa8.29□□□□□ -1.08
PCM1-212ENST00000519253 FBXO8Q9NRD0 319 aa8.29□□□□□ -1.08
PCM1-212ENST00000519253 RAD18Q9NS91 495 aa8.29□□□□□ -1.08
PCM1-212ENST00000519253 CLCA2Q9UQC9 943 aa8.29□□□□□ -1.08
PCM1-212ENST00000519253 NHSQ6T4R5 1651 aa8.29□□□□□ -1.08
PCM1-212ENST00000519253 ANKDD1BA6NHY2 528 aa8.29□□□□□ -1.08
PCM1-212ENST00000519253 SLC16A6O15403 523 aa8.29□□□□□ -1.08
PCM1-212ENST00000519253 UGT2B17O75795 530 aa8.29□□□□□ -1.08
PCM1-212ENST00000519253 AKR1A1P14550 325 aa8.29□□□□□ -1.08
PCM1-212ENST00000519253 TNNI3P19429 210 aa8.29□□□□□ -1.08
PCM1-212ENST00000519253 GRK4P32298 578 aa8.29□□□□□ -1.08
PCM1-212ENST00000519253 NSG1P42857 185 aa8.29□□□□□ -1.08
PCM1-212ENST00000519253 PTPN5P54829 565 aa8.29□□□□□ -1.08
PCM1-212ENST00000519253 RPS3AP61247 264 aaKnown RBP8.29□□□□□ -1.08
PCM1-212ENST00000519253 BEX3Q00994 111 aa8.29□□□□□ -1.08
PCM1-212ENST00000519253 PTPRCAPQ14761 206 aa8.29□□□□□ -1.08
PCM1-212ENST00000519253 HKDC1Q2TB90 917 aa8.29□□□□□ -1.08
PCM1-212ENST00000519253 SYT6Q5T7P8 510 aaPredicted RBP8.29□□□□□ -1.08
PCM1-212ENST00000519253 DEF8Q6ZN54 512 aa8.29□□□□□ -1.08
PCM1-212ENST00000519253 GDPGP1Q6ZNW5 385 aa8.29□□□□□ -1.08
PCM1-212ENST00000519253 GPRIN1Q7Z2K8 1008 aa8.29□□□□□ -1.08
PCM1-212ENST00000519253 C14orf80Q86SX3 495 aa8.29□□□□□ -1.08
PCM1-212ENST00000519253 DENND6BQ8NEG7 585 aa8.29□□□□□ -1.08
PCM1-212ENST00000519253 TRPM4Q8TD43 1214 aa8.29□□□□□ -1.08
PCM1-212ENST00000519253 SGK2Q9HBY8 427 aa8.29□□□□□ -1.08
PCM1-212ENST00000519253 CMAHPQ9Y471 501 aa8.29□□□□□ -1.08
PCM1-212ENST00000519253 ADAM23O75077 832 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 SRPRAP08240 638 aaKnown RBP8.28□□□□□ -1.08
PCM1-212ENST00000519253 ADRA1AP35348 466 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 CLDN8P56748 225 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 SOX4Q06945 474 aaPredicted RBP8.28□□□□□ -1.08
PCM1-212ENST00000519253 SELPLGQ14242 412 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 GNA13Q14344 377 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 EIF4HQ15056 248 aaKnown RBP8.28□□□□□ -1.08
PCM1-212ENST00000519253 TBCEQ15813 527 aaPredicted RBP8.28□□□□□ -1.08
PCM1-212ENST00000519253 CIR1Q86X95 450 aaPredicted RBP8.28□□□□□ -1.08
PCM1-212ENST00000519253 HS3ST5Q8IZT8 346 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 SLC22A17Q8WUG5 538 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 ZCCHC2Q9C0B9 1178 aaKnown RBP8.28□□□□□ -1.08
PCM1-212ENST00000519253 PDGFDQ9GZP0 370 aaPredicted RBP8.28□□□□□ -1.08
PCM1-212ENST00000519253 SLC25A13Q9UJS0 675 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 POU2F3Q9UKI9 436 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 TLR4O00206 839 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 HOXA2O43364 376 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 OR4Q2P0C623 313 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 CCNYL3P0C7X3 344 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 CYP2A6P11509 494 aaPredicted RBP8.28□□□□□ -1.08
PCM1-212ENST00000519253 HOXA11P31270 313 aaPredicted RBP8.28□□□□□ -1.08
PCM1-212ENST00000519253 MAPK9P45984 424 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 ERVPABLB-1P60509 514 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 PTSQ03393 145 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 SEMA3BQ13214 749 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 ABRAXAS2Q15018 415 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 PCBP2Q15366 365 aaKnown RBP eCLIP8.28□□□□□ -1.083e-7■■□□□ 14.5
PCM1-212ENST00000519253 SNAPC1Q16533 368 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 MS4A13Q5J8X5 152 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 ARHGAP12Q8IWW6 846 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 UFD1Q92890 307 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 TRIB3Q96RU7 358 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 PSD2Q9BQI7 771 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 SPATA9Q9BWV2 254 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 EBPLQ9BY08 206 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 POLR2J3Q9H1A7 115 aaKnown RBP8.28□□□□□ -1.08
PCM1-212ENST00000519253 BRD9Q9H8M2 597 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 NPAP1Q9NZP6 1156 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 VPS29Q9UBQ0 182 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 HSPB11Q9Y547 144 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 ANKRD66B4E2M5 251 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 SBK3P0C264 359 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 HNMTP50135 292 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 HTR6P50406 440 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 SNRPD1P62314 119 aaKnown RBP8.28□□□□□ -1.08
PCM1-212ENST00000519253 ZBTB6Q15916 424 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 TRIM48Q8IWZ4 208 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 GFM1Q96RP9 751 aaKnown RBP8.28□□□□□ -1.08
PCM1-212ENST00000519253 TIGARQ9NQ88 270 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 CORINQ9Y5Q5 1042 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 ARHGEF15O94989 841 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 ACVRL1P37023 503 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 E2F2Q14209 437 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 GPR142Q7Z601 462 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 GPR149Q86SP6 731 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 PGRMC2O15173 223 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 SLC6A4P31645 630 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 CASP3P42574 277 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 RUNDC3AQ59EK9 446 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 ZNF767PQ75MW2 155 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 CXXC5Q7LFL8 322 aaKnown RBP8.28□□□□□ -1.08
PCM1-212ENST00000519253 CDK20Q8IZL9 346 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 KRT78Q8N1N4 520 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 UBE2J2Q8N2K1 259 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 OXR1Q8N573 874 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 ATAD1Q8NBU5 361 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 MRPS31Q92665 395 aaKnown RBP8.28□□□□□ -1.08
PCM1-212ENST00000519253 TTYH2Q9BSA4 534 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 ZNF224Q9NZL3 707 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms