RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 SLX1AQ9BQ83 275 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 FSD1Q9BTV5 496 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 FAM129AQ9BZQ8 928 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 ABCG4Q9H172 646 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 KCNK15Q9H427 330 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 THAP9Q9H5L6 903 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 ZNF696Q9H7X3 374 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 NOL11Q9H8H0 719 aaKnown RBP2.99□□□□□ -1.93
HERC4-215ENST00000515753 ZBTB20Q9HC78 741 aaPredicted RBP2.99□□□□□ -1.93
HERC4-215ENST00000515753 PAG1Q9NWQ8 432 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 ARMCX3Q9UH62 379 aaPredicted RBP2.99□□□□□ -1.93
HERC4-215ENST00000515753 DBNLQ9UJU6 430 aaKnown RBP2.99□□□□□ -1.93
HERC4-215ENST00000515753 R3HDM2Q9Y2K5 976 aaKnown RBP2.99□□□□□ -1.93
HERC4-215ENST00000515753 YIPF1Q9Y548 306 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 ZFYVE9O95405 1425 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 PTCH1Q13635 1447 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 TET3O43151 1660 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 ZNF541Q9H0D2 1346 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 ADGRL2O95490 1459 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 ALKQ9UM73 1620 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 PMS2P5A8MQ11 134 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 BLOC1S5-TXNDC5H3BN57 136 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 SLC33A1O00400 549 aaPredicted RBP2.98□□□□□ -1.93
HERC4-215ENST00000515753 SPRY1O43609 319 aaPredicted RBP2.98□□□□□ -1.93
HERC4-215ENST00000515753 PCDH7O60245 1069 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 KCNK5O95279 499 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 CELF2O95319 508 aaKnown RBP2.98□□□□□ -1.93
HERC4-215ENST00000515753 BCL10O95999 233 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 GH2P01242 217 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 AMBPP02760 352 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 EEF2P13639 858 aaKnown RBP2.98□□□□□ -1.93
HERC4-215ENST00000515753 PFKFB1P16118 471 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 PDGFRAP16234 1089 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 GAP43P17677 238 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 EEF1B2P24534 225 aaKnown RBP2.98□□□□□ -1.93
HERC4-215ENST00000515753 HPDP32754 393 aaPredicted RBP2.98□□□□□ -1.93
HERC4-215ENST00000515753 NT5C2P49902 561 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 MMP15P51511 669 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 NR0B1P51843 470 aaKnown RBP2.98□□□□□ -1.93
HERC4-215ENST00000515753 LIMK1P53667 647 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 LINC01547P58512 204 aaPredicted RBP2.98□□□□□ -1.93
HERC4-215ENST00000515753 STARD6P59095 220 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 ERVK11-1P61568 191 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 C17orf67Q0P5P2 114 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 TAF7Q15545 349 aaPredicted RBP2.98□□□□□ -1.93
HERC4-215ENST00000515753 TMEM30BQ3MIR4 351 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 TECRLQ5HYJ1 363 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 WDR38Q5JTN6 314 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 ZDHHC20Q5W0Z9 365 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 C11orf57Q6ZUT1 292 aaPredicted RBP2.98□□□□□ -1.93
HERC4-215ENST00000515753 BTN2A1Q7KYR7 527 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 LDB1Q86U70 411 aaPredicted RBP2.98□□□□□ -1.93
HERC4-215ENST00000515753 ADIPOR2Q86V24 386 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 LCA5Q86VQ0 697 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 UNC5CLQ8IV45 518 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 APLFQ8IW19 511 aaPredicted RBP2.98□□□□□ -1.93
HERC4-215ENST00000515753 TRIM58Q8NG06 486 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 OR10V1Q8NGI7 309 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 C9orf43Q8TAL5 461 aaPredicted RBP2.98□□□□□ -1.93
HERC4-215ENST00000515753 LGALS12Q96DT0 336 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 SPACA9Q96E40 222 aaPredicted RBP2.98□□□□□ -1.93
HERC4-215ENST00000515753 C1orf21Q9H246 121 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 TSPY26PQ9H489 355 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 INTS10Q9NVR2 710 aaKnown RBP2.98□□□□□ -1.93
HERC4-215ENST00000515753 ERAP1Q9NZ08 941 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.98□□□□□ -1.93
HERC4-215ENST00000515753 HACL1Q9UJ83 578 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 HOOK1Q9UJC3 728 aaKnown RBP2.98□□□□□ -1.93
HERC4-215ENST00000515753 FAF1Q9UNN5 650 aaPredicted RBP2.98□□□□□ -1.93
HERC4-215ENST00000515753 ATP6V0A2Q9Y487 856 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 ADAMTS13Q76LX8 1427 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 PNPLA6Q8IY17 1366 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 ADGRB3O60242 1522 aa2.98□□□□□ -1.93
HERC4-215ENST00000515753 MROH1Q8NDA8 1641 aa2.97□□□□□ -1.93
HERC4-215ENST00000515753 DIP2AQ14689 1571 aa2.97□□□□□ -1.93
HERC4-215ENST00000515753 HFM1A2PYH4 1435 aa2.97□□□□□ -1.93
HERC4-215ENST00000515753 A0A1W2PRV1 198 aa2.97□□□□□ -1.93
HERC4-215ENST00000515753 NDC80O14777 642 aa2.97□□□□□ -1.93
HERC4-215ENST00000515753 CLIC2O15247 247 aa2.97□□□□□ -1.93
HERC4-215ENST00000515753 PLPP2O43688 288 aa2.97□□□□□ -1.93
HERC4-215ENST00000515753 PRPSAP2O60256 369 aa2.97□□□□□ -1.93
HERC4-215ENST00000515753 PRAMEF11O60813 436 aa2.97□□□□□ -1.93
HERC4-215ENST00000515753 RSL1D1O76021 490 aaKnown RBP2.97□□□□□ -1.93
HERC4-215ENST00000515753 GCNT3O95395 438 aa2.97□□□□□ -1.93
HERC4-215ENST00000515753 GBAP04062 536 aa2.97□□□□□ -1.93
HERC4-215ENST00000515753 TFAP2AP05549 437 aa2.97□□□□□ -1.93
HERC4-215ENST00000515753 IGHV4-38-2P0DP08 117 aa2.97□□□□□ -1.93
HERC4-215ENST00000515753 ADRA2CP18825 462 aa2.97□□□□□ -1.93
HERC4-215ENST00000515753 CDC25CP30307 473 aa2.97□□□□□ -1.93
HERC4-215ENST00000515753 SOAT1P35610 550 aa2.97□□□□□ -1.93
HERC4-215ENST00000515753 PRKCIP41743 596 aa2.97□□□□□ -1.93
HERC4-215ENST00000515753 KHKP50053 298 aa2.97□□□□□ -1.93
HERC4-215ENST00000515753 SNU13P55769 128 aaKnown RBP2.97□□□□□ -1.93
HERC4-215ENST00000515753 RBPJQ06330 500 aa2.97□□□□□ -1.93
HERC4-215ENST00000515753 MFAP5Q13361 173 aa2.97□□□□□ -1.93
HERC4-215ENST00000515753 KRT33BQ14525 404 aa2.97□□□□□ -1.93
HERC4-215ENST00000515753 RRS1Q15050 365 aaKnown RBP2.97□□□□□ -1.93
HERC4-215ENST00000515753 PTPN14Q15678 1187 aa2.97□□□□□ -1.93
HERC4-215ENST00000515753 DLG2Q15700 870 aa2.97□□□□□ -1.93
HERC4-215ENST00000515753 DUOXA1Q1HG43 343 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms