RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 TAF1BQ53T94 588 aaPredicted RBP3.26□□□□□ -1.89
LINC01088-211ENST00000515597 PAQR6Q6TCH4 344 aa3.26□□□□□ -1.89
LINC01088-211ENST00000515597 PTAR1Q7Z6K3 402 aaPredicted RBP3.26□□□□□ -1.89
LINC01088-211ENST00000515597 NUDT13Q86X67 352 aa3.26□□□□□ -1.89
LINC01088-211ENST00000515597 FBXL16Q8N461 479 aa3.26□□□□□ -1.89
LINC01088-211ENST00000515597 CFAP61Q8NHU2 1237 aa3.26□□□□□ -1.89
LINC01088-211ENST00000515597 GTF3AQ92664 365 aaKnown RBP3.26□□□□□ -1.89
LINC01088-211ENST00000515597 DHX58Q96C10 678 aa3.26□□□□□ -1.89
LINC01088-211ENST00000515597 OMA1Q96E52 524 aa3.26□□□□□ -1.89
LINC01088-211ENST00000515597 FOXN4Q96NZ1 517 aa3.26□□□□□ -1.89
LINC01088-211ENST00000515597 RAD9AQ99638 391 aa3.26□□□□□ -1.89
LINC01088-211ENST00000515597 PANK2Q9BZ23 570 aa3.26□□□□□ -1.89
LINC01088-211ENST00000515597 OR2B2Q9GZK3 357 aa3.26□□□□□ -1.89
LINC01088-211ENST00000515597 UPF3AQ9H1J1 476 aaKnown RBP3.26□□□□□ -1.89
LINC01088-211ENST00000515597 PIH1D3Q9NQM4 214 aaKnown RBP3.26□□□□□ -1.89
LINC01088-211ENST00000515597 PRR34Q9NV39 138 aa3.26□□□□□ -1.89
LINC01088-211ENST00000515597 P4HTMQ9NXG6 502 aa3.26□□□□□ -1.89
LINC01088-211ENST00000515597 CRNNQ9UBG3 495 aaPredicted RBP3.26□□□□□ -1.89
LINC01088-211ENST00000515597 SWAP70Q9UH65 585 aa3.26□□□□□ -1.89
LINC01088-211ENST00000515597 PPP1R3CQ9UQK1 317 aa3.26□□□□□ -1.89
LINC01088-211ENST00000515597 TRIM17Q9Y577 477 aa3.26□□□□□ -1.89
LINC01088-211ENST00000515597 ANGPTL3Q9Y5C1 460 aa3.26□□□□□ -1.89
LINC01088-211ENST00000515597 FAM169AQ9Y6X4 670 aa3.26□□□□□ -1.89
LINC01088-211ENST00000515597 MED14O60244 1454 aa3.26□□□□□ -1.89
LINC01088-211ENST00000515597 COL16A1Q07092 1604 aaPredicted RBP3.26□□□□□ -1.89
LINC01088-211ENST00000515597 ABCA6Q8N139 1617 aa3.26□□□□□ -1.89
LINC01088-211ENST00000515597 RAPGEF6Q8TEU7 1601 aa3.26□□□□□ -1.89
LINC01088-211ENST00000515597 RNF17Q9BXT8 1623 aaKnown RBP3.26□□□□□ -1.89
LINC01088-211ENST00000515597 AFF2P51816 1311 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 AGLP35573 1532 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 SOCS3O14543 225 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 ZNF195O14628 629 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 ADAM20O43506 726 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 GLRA3O75311 464 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 TRUB2O95900 331 aaKnown RBP3.25□□□□□ -1.89
LINC01088-211ENST00000515597 VTNP04004 478 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 LDHCP07864 332 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 LINGO3P0C6S8 592 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 MMP12P39900 470 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 OPRL1P41146 370 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 PAX9P55771 341 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 IFI35P80217 286 aaPredicted RBP3.25□□□□□ -1.89
LINC01088-211ENST00000515597 RIGQ13278 110 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 PRPF4BQ13523 1007 aaKnown RBP3.25□□□□□ -1.89
LINC01088-211ENST00000515597 SNTB1Q13884 538 aaKnown RBP3.25□□□□□ -1.89
LINC01088-211ENST00000515597 ODF4Q2M2E3 257 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 XKR3Q5GH77 459 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 SLC25A53Q5H9E4 307 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 C9orf152Q5JTZ5 239 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 RNASEH2BQ5TBB1 312 aaKnown RBP3.25□□□□□ -1.89
LINC01088-211ENST00000515597 NAA16Q6N069 864 aaPredicted RBP3.25□□□□□ -1.89
LINC01088-211ENST00000515597 SLC25A47Q6Q0C1 308 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 RTN4RL2Q86UN3 420 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 CDC20BQ86Y33 519 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 ERC1Q8IUD2 1116 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 CDK20Q8IZL9 346 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 EID3Q8N140 333 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 POGLUT1Q8NBL1 392 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 OR11H4Q8NGC9 324 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 ZNF519Q8TB69 540 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 SMAP2Q8WU79 429 aaPredicted RBP3.25□□□□□ -1.89
LINC01088-211ENST00000515597 SSMEM1Q8WWF3 244 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 ARHGAP45Q92619 1136 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 NXNL1Q96CM4 212 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 SPDL1Q96EA4 605 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 C10orf90Q96M02 699 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 OLFM1Q99784 485 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 LRRC61Q9BV99 259 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 GKN1Q9NS71 199 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 MAN2C1Q9NTJ4 1040 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 OR6C2Q9NZP2 312 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 SLC24A2Q9UI40 661 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 ANAPC2Q9UJX6 822 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 TRPV2Q9Y5S1 764 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 NPHP4O75161 1426 aaPredicted RBP3.25□□□□□ -1.89
LINC01088-211ENST00000515597 JCADQ9P266 1359 aa3.25□□□□□ -1.89
LINC01088-211ENST00000515597 MAP3K1Q13233 1512 aa3.24□□□□□ -1.89
LINC01088-211ENST00000515597 CEP350Q5VT06 3117 aa3.24□□□□□ -1.89
LINC01088-211ENST00000515597 CAMTA1Q9Y6Y1 1673 aa3.24□□□□□ -1.89
LINC01088-211ENST00000515597 A2ML1A8K2U0 1454 aa3.24□□□□□ -1.89
LINC01088-211ENST00000515597 EPM2AB3EWF7 344 aa3.24□□□□□ -1.89
LINC01088-211ENST00000515597 DANCRP0C864 163 aa3.24□□□□□ -1.89
LINC01088-211ENST00000515597 DNAH10OSP0CZ25 163 aa3.24□□□□□ -1.89
LINC01088-211ENST00000515597 MNDAP41218 407 aa3.24□□□□□ -1.89
LINC01088-211ENST00000515597 CAPZA2P47755 286 aa3.24□□□□□ -1.89
LINC01088-211ENST00000515597 ELAVL2Q12926 359 aaKnown RBP3.24□□□□□ -1.89
LINC01088-211ENST00000515597 NFATC2Q13469 925 aa3.24□□□□□ -1.89
LINC01088-211ENST00000515597 SQLEQ14534 574 aa3.24□□□□□ -1.89
LINC01088-211ENST00000515597 TNIP1Q15025 636 aa3.24□□□□□ -1.89
LINC01088-211ENST00000515597 E2F5Q15329 346 aa3.24□□□□□ -1.89
LINC01088-211ENST00000515597 TMEM266Q2M3C6 531 aa3.24□□□□□ -1.89
LINC01088-211ENST00000515597 BTN2A1Q7KYR7 527 aa3.24□□□□□ -1.89
LINC01088-211ENST00000515597 ZNF595Q8IYB9 648 aa3.24□□□□□ -1.89
LINC01088-211ENST00000515597 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.24□□□□□ -1.89
LINC01088-211ENST00000515597 GPATCH1Q9BRR8 931 aaKnown RBP3.24□□□□□ -1.89
LINC01088-211ENST00000515597 URM1Q9BTM9 101 aaKnown RBP3.24□□□□□ -1.89
LINC01088-211ENST00000515597 DGCR6LQ9BY27 220 aa3.24□□□□□ -1.89
LINC01088-211ENST00000515597 SHARPINQ9H0F6 387 aa3.24□□□□□ -1.89
LINC01088-211ENST00000515597 THAP2Q9H0W7 228 aa3.24□□□□□ -1.89
LINC01088-211ENST00000515597 TMX4Q9H1E5 349 aaPredicted RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms