RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 HAT1O14929 419 aa10.99□□□□□ -0.65
VCAN-212ENST00000515397 GUCA1CO95843 209 aa10.99□□□□□ -0.65
VCAN-212ENST00000515397 GMPRP36959 345 aa10.99□□□□□ -0.65
VCAN-212ENST00000515397 SKIV2L2P42285 1042 aaKnown RBP10.99□□□□□ -0.65
VCAN-212ENST00000515397 GCGRP47871 477 aa10.99□□□□□ -0.65
VCAN-212ENST00000515397 RGS4P49798 205 aa10.99□□□□□ -0.65
VCAN-212ENST00000515397 TAS2R39P59534 338 aa10.99□□□□□ -0.65
VCAN-212ENST00000515397 IL2P60568 153 aa10.99□□□□□ -0.65
VCAN-212ENST00000515397 PRDX1Q06830 199 aaKnown RBP10.99□□□□□ -0.65
VCAN-212ENST00000515397 CALCOCO2Q13137 446 aa10.99□□□□□ -0.65
VCAN-212ENST00000515397 ARHGAP19Q14CB8 494 aa10.99□□□□□ -0.65
VCAN-212ENST00000515397 ZXDCQ2QGD7 858 aaPredicted RBP10.99□□□□□ -0.65
VCAN-212ENST00000515397 HKDC1Q2TB90 917 aa10.99□□□□□ -0.65
VCAN-212ENST00000515397 CRTC2Q53ET0 693 aaPredicted RBP10.99□□□□□ -0.65
VCAN-212ENST00000515397 KIAA0408Q6ZU52 694 aa10.99□□□□□ -0.65
VCAN-212ENST00000515397 ZC3HC1Q86WB0 502 aaKnown RBP10.99□□□□□ -0.65
VCAN-212ENST00000515397 PAQR7Q86WK9 346 aa10.99□□□□□ -0.65
VCAN-212ENST00000515397 PALM2Q8IXS6 379 aa10.99□□□□□ -0.65
VCAN-212ENST00000515397 SHISA5Q8N114 240 aa10.99□□□□□ -0.65
VCAN-212ENST00000515397 MYO1HQ8N1T3 1032 aa10.99□□□□□ -0.65
VCAN-212ENST00000515397 GABPB2Q8TAK5 448 aaPredicted RBP10.99□□□□□ -0.65
VCAN-212ENST00000515397 MCOLN3Q8TDD5 553 aa10.99□□□□□ -0.65
VCAN-212ENST00000515397 ADAMTS17Q8TE56 1095 aa10.99□□□□□ -0.65
VCAN-212ENST00000515397 PYCR2Q96C36 320 aa10.99□□□□□ -0.65
VCAN-212ENST00000515397 MESP1Q9BRJ9 268 aa10.99□□□□□ -0.65
VCAN-212ENST00000515397 LRRC1Q9BTT6 524 aa10.99□□□□□ -0.65
VCAN-212ENST00000515397 ING2Q9H160 280 aa10.99□□□□□ -0.65
VCAN-212ENST00000515397 ADNPQ9H2P0 1102 aa10.99□□□□□ -0.65
VCAN-212ENST00000515397 PARVBQ9HBI1 364 aa10.99□□□□□ -0.65
VCAN-212ENST00000515397 UTP6Q9NYH9 597 aaKnown RBP10.99□□□□□ -0.65
VCAN-212ENST00000515397 MOCS1Q9NZB8 636 aa10.99□□□□□ -0.65
VCAN-212ENST00000515397 WHRNQ9P202 907 aa10.99□□□□□ -0.65
VCAN-212ENST00000515397 MTO1Q9Y2Z2 717 aaKnown RBP10.99□□□□□ -0.65
VCAN-212ENST00000515397 PCM1Q15154 2024 aa10.99□□□□□ -0.65
VCAN-212ENST00000515397 FAM95CA0A1B0GW59 222 aa10.98□□□□□ -0.65
VCAN-212ENST00000515397 A0A1B0GX78 115 aa10.98□□□□□ -0.65
VCAN-212ENST00000515397 FEZF1A0PJY2 475 aa10.98□□□□□ -0.65
VCAN-212ENST00000515397 HYKKA2RU49 373 aa10.98□□□□□ -0.65
VCAN-212ENST00000515397 CDC7O00311 574 aa10.98□□□□□ -0.65
VCAN-212ENST00000515397 DSCR3O14972 297 aa10.98□□□□□ -0.65
VCAN-212ENST00000515397 ALOX12BO75342 701 aa10.98□□□□□ -0.65
VCAN-212ENST00000515397 RFPL1O75677 317 aa10.98□□□□□ -0.65
VCAN-212ENST00000515397 FAM155BO75949 473 aa10.98□□□□□ -0.65
VCAN-212ENST00000515397 UMODP07911 640 aa10.98□□□□□ -0.65
VCAN-212ENST00000515397 SFTPCP11686 197 aa10.98□□□□□ -0.65
VCAN-212ENST00000515397 FDXRP22570 491 aa10.98□□□□□ -0.65
VCAN-212ENST00000515397 PMS2P54278 862 aa10.98□□□□□ -0.65
VCAN-212ENST00000515397 GPX6P59796 221 aa10.98□□□□□ -0.65
VCAN-212ENST00000515397 GRM7Q14831 915 aa10.98□□□□□ -0.65
VCAN-212ENST00000515397 AGTRAPQ6RW13 159 aa10.98□□□□□ -0.65
VCAN-212ENST00000515397 ZDHHC24Q6UX98 284 aa10.98□□□□□ -0.65
VCAN-212ENST00000515397 C3orf62Q6ZUJ4 267 aa10.98□□□□□ -0.65
VCAN-212ENST00000515397 COX15Q7KZN9 410 aa10.98□□□□□ -0.65
VCAN-212ENST00000515397 RNF44Q7L0R7 432 aa10.98□□□□□ -0.65
VCAN-212ENST00000515397 CEP97Q8IW35 865 aa10.98□□□□□ -0.65
VCAN-212ENST00000515397 AMER2Q8N7J2 671 aa10.98□□□□□ -0.65
VCAN-212ENST00000515397 TTC29Q8NA56 475 aaPredicted RBP10.98□□□□□ -0.65
VCAN-212ENST00000515397 FBXO15Q8NCQ5 510 aaPredicted RBP10.98□□□□□ -0.65
VCAN-212ENST00000515397 BBOF1Q8ND07 529 aa10.98□□□□□ -0.65
VCAN-212ENST00000515397 FBXO25Q8TCJ0 367 aa10.98□□□□□ -0.65
VCAN-212ENST00000515397 ANKRD49Q8WVL7 239 aa10.98□□□□□ -0.65
VCAN-212ENST00000515397 COL26A1Q96A83 441 aa10.98□□□□□ -0.65
VCAN-212ENST00000515397 CCDC138Q96M89 665 aa10.98□□□□□ -0.65
VCAN-212ENST00000515397 ZNF285Q96NJ3 590 aa10.98□□□□□ -0.65
VCAN-212ENST00000515397 ZFYVE21Q9BQ24 234 aa10.98□□□□□ -0.65
VCAN-212ENST00000515397 YIPF2Q9BWQ6 316 aa10.98□□□□□ -0.65
VCAN-212ENST00000515397 SOX17Q9H6I2 414 aaPredicted RBP10.98□□□□□ -0.65
VCAN-212ENST00000515397 CAB39LQ9H9S4 337 aa10.98□□□□□ -0.65
VCAN-212ENST00000515397 ACSS2Q9NR19 701 aa10.98□□□□□ -0.65
VCAN-212ENST00000515397 CTSFQ9UBX1 484 aa10.98□□□□□ -0.65
VCAN-212ENST00000515397 SRPK3Q9UPE1 567 aa10.98□□□□□ -0.65
VCAN-212ENST00000515397 UTP11Q9Y3A2 253 aaKnown RBP10.98□□□□□ -0.65
VCAN-212ENST00000515397 PCSK5Q92824 1860 aa10.98□□□□□ -0.65
VCAN-212ENST00000515397 NPEPPSL1A6NEC2 478 aa10.97□□□□□ -0.65
VCAN-212ENST00000515397 ZNF839A8K0R7 811 aa10.97□□□□□ -0.65
VCAN-212ENST00000515397 MKRN2OSH3BPM6 223 aa10.97□□□□□ -0.65
VCAN-212ENST00000515397 P2RX6O15547 441 aa10.97□□□□□ -0.65
VCAN-212ENST00000515397 SUV39H1O43463 412 aa10.97□□□□□ -0.65
VCAN-212ENST00000515397 SRPX2O60687 465 aaPredicted RBP10.97□□□□□ -0.65
VCAN-212ENST00000515397 RECKO95980 971 aa10.97□□□□□ -0.65
VCAN-212ENST00000515397 HSD17B2P37059 387 aa10.97□□□□□ -0.65
VCAN-212ENST00000515397 FOLR3P41439 243 aa10.97□□□□□ -0.65
VCAN-212ENST00000515397 ARSFP54793 590 aa10.97□□□□□ -0.65
VCAN-212ENST00000515397 TBPL1P62380 186 aa10.97□□□□□ -0.65
VCAN-212ENST00000515397 MEF2AQ02078 507 aaPredicted RBP10.97□□□□□ -0.65
VCAN-212ENST00000515397 C18orf21Q32NC0 220 aaPredicted RBP10.97□□□□□ -0.65
VCAN-212ENST00000515397 LACTB2Q53H82 288 aaPredicted RBP10.97□□□□□ -0.65
VCAN-212ENST00000515397 TCTE1Q5JU00 501 aa10.97□□□□□ -0.65
VCAN-212ENST00000515397 UBAP2Q5T6F2 1119 aaKnown RBP10.97□□□□□ -0.65
VCAN-212ENST00000515397 ZNF425Q6IV72 752 aa10.97□□□□□ -0.65
VCAN-212ENST00000515397 FAM45BPQ6NSW5 357 aa10.97□□□□□ -0.65
VCAN-212ENST00000515397 MRPL14Q6P1L8 145 aaKnown RBP10.97□□□□□ -0.65
VCAN-212ENST00000515397 ASB18Q6ZVZ8 466 aa10.97□□□□□ -0.65
VCAN-212ENST00000515397 OVCH1Q7RTY7 1134 aa10.97□□□□□ -0.65
VCAN-212ENST00000515397 GALNT7Q86SF2 657 aa10.97□□□□□ -0.65
VCAN-212ENST00000515397 CSNK1A1LQ8N752 337 aa10.97□□□□□ -0.65
VCAN-212ENST00000515397 FAM45AQ8TCE6 357 aa10.97□□□□□ -0.65
VCAN-212ENST00000515397 PROKR1Q8TCW9 393 aa10.97□□□□□ -0.65
VCAN-212ENST00000515397 THAP4Q8WY91 577 aa10.97□□□□□ -0.65
VCAN-212ENST00000515397 MRRFQ96E11 262 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms