RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 GPX2P18283 190 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 WEE1P30291 646 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 RAD23AP54725 363 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 PPP2R2BQ00005 443 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 C11orf91Q3C1V1 193 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 BCL7AQ4VC05 210 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 SPIN4Q56A73 249 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 ANXA8L1Q5VT79 327 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 OR4F3Q6IEY1 312 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 DOK6Q6PKX4 331 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 NLRP8Q86W28 1048 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 PHACTR4Q8IZ21 702 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 CELF5Q8N6W0 485 aaKnown RBP14.39□□□□□ -0.11
NUP54-217ENST00000514987 NAT16Q8N8M0 369 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 NETO1Q8TDF5 533 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 POF1BQ8WVV4 589 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 NRBF2Q96F24 287 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 MUS81Q96NY9 551 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 PANX1Q96RD7 426 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 SLC6A13Q9NSD5 602 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 FAM118AQ9NWS6 357 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 TMEM9Q9P0T7 183 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 BLOC1S6Q9UL45 172 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 GMEB1Q9Y692 573 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 E2F6O75461 281 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 CLIC3O95833 236 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 ADH5P11766 374 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 COX7A2P14406 83 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 HPCAL1P37235 193 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 MAGEA2P43356 314 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 ARHGDIAP52565 204 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 VAC14Q08AM6 782 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 ELP6Q0PNE2 266 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 NAE1Q13564 534 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 E2F2Q14209 437 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 DHCR24Q15392 516 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 NKG7Q16617 165 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.39□□□□□ -0.11
NUP54-217ENST00000514987 BROXQ5VW32 411 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 CPZQ66K79 652 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 CAMKMTQ7Z624 323 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 ANKRD46Q86W74 232 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 CLVS1Q8IUQ0 354 aaPredicted RBP14.39□□□□□ -0.11
NUP54-217ENST00000514987 SPPL3Q8TCT6 385 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 CXorf40BQ96DE9 158 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 DTD2Q96FN9 168 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 MAGED4Q96JG8 741 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 COQ10AQ96MF6 247 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 TOR3AQ9H497 397 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 CXorf21Q9HAI6 301 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 SGK2Q9HBY8 427 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 AASDHPPTQ9NRN7 309 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 BTNL2Q9UIR0 455 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 KCNE2Q9Y6J6 123 aa14.39□□□□□ -0.11
NUP54-217ENST00000514987 CROCCQ5TZA2 2017 aa14.38□□□□□ -0.11
NUP54-217ENST00000514987 MAGEB17A8MXT2 336 aa14.38□□□□□ -0.11
NUP54-217ENST00000514987 E7EQ34 232 aa14.38□□□□□ -0.11
NUP54-217ENST00000514987 H3BM21 787 aa14.38□□□□□ -0.11
NUP54-217ENST00000514987 CLIC1O00299 241 aa14.38□□□□□ -0.11
NUP54-217ENST00000514987 LRATO95237 230 aa14.38□□□□□ -0.11
NUP54-217ENST00000514987 GSNP06396 782 aa14.38□□□□□ -0.11
NUP54-217ENST00000514987 DCTP40126 519 aa14.38□□□□□ -0.11
NUP54-217ENST00000514987 TPD52P55327 224 aaPredicted RBP14.38□□□□□ -0.11
NUP54-217ENST00000514987 GABARAPL2P60520 117 aa14.38□□□□□ -0.11
NUP54-217ENST00000514987 TUBA3CQ13748 450 aa14.38□□□□□ -0.11
NUP54-217ENST00000514987 UGT8Q16880 541 aa14.38□□□□□ -0.11
NUP54-217ENST00000514987 VMACQ2NL98 169 aa14.38□□□□□ -0.11
NUP54-217ENST00000514987 ZIK1Q3SY52 487 aaPredicted RBP14.38□□□□□ -0.11
NUP54-217ENST00000514987 TMEM220Q6QAJ8 160 aa14.38□□□□□ -0.11
NUP54-217ENST00000514987 KCTD8Q6ZWB6 473 aa14.38□□□□□ -0.11
NUP54-217ENST00000514987 CPA6Q8N4T0 437 aa14.38□□□□□ -0.11
NUP54-217ENST00000514987 TMIEQ8NEW7 156 aa14.38□□□□□ -0.11
NUP54-217ENST00000514987 SORCS1Q8WY21 1168 aa14.38□□□□□ -0.11
NUP54-217ENST00000514987 ISOC1Q96CN7 298 aa14.38□□□□□ -0.11
NUP54-217ENST00000514987 C11orf24Q96F05 449 aaPredicted RBP14.38□□□□□ -0.11
NUP54-217ENST00000514987 MED8Q96G25 268 aa14.38□□□□□ -0.11
NUP54-217ENST00000514987 ZNF514Q96K75 400 aaPredicted RBP14.38□□□□□ -0.11
NUP54-217ENST00000514987 PHF12Q96QT6 1004 aa14.38□□□□□ -0.11
NUP54-217ENST00000514987 PKP4Q99569 1192 aa14.38□□□□□ -0.11
NUP54-217ENST00000514987 REXO4Q9GZR2 422 aaKnown RBP14.38□□□□□ -0.11
NUP54-217ENST00000514987 POLR1BQ9H9Y6 1135 aa14.38□□□□□ -0.11
NUP54-217ENST00000514987 SIRT5Q9NXA8 310 aa14.38□□□□□ -0.11
NUP54-217ENST00000514987 NOL3O60936 208 aaKnown RBP14.37□□□□□ -0.11
NUP54-217ENST00000514987 CPNE6O95741 557 aa14.37□□□□□ -0.11
NUP54-217ENST00000514987 MYCLP1P12525 358 aaPredicted RBP14.37□□□□□ -0.11
NUP54-217ENST00000514987 ENGP17813 658 aa14.37□□□□□ -0.11
NUP54-217ENST00000514987 CD22P20273 847 aa14.37□□□□□ -0.11
NUP54-217ENST00000514987 DCKP27707 260 aa14.37□□□□□ -0.11
NUP54-217ENST00000514987 CDKN2CP42773 168 aa14.37□□□□□ -0.11
NUP54-217ENST00000514987 CTSCP53634 463 aa14.37□□□□□ -0.11
NUP54-217ENST00000514987 VEZF1Q14119 521 aa14.37□□□□□ -0.11
NUP54-217ENST00000514987 PLCL1Q15111 1095 aa14.37□□□□□ -0.11
NUP54-217ENST00000514987 SKIV2LQ15477 1246 aaKnown RBP14.37□□□□□ -0.11
NUP54-217ENST00000514987 PAGE2BQ5JRK9 111 aa14.37□□□□□ -0.11
NUP54-217ENST00000514987 CAPN13Q6MZZ7 669 aaPredicted RBP14.37□□□□□ -0.11
NUP54-217ENST00000514987 CES5AQ6NT32 575 aa14.37□□□□□ -0.11
NUP54-217ENST00000514987 MED27Q6P2C8 311 aa14.37□□□□□ -0.11
NUP54-217ENST00000514987 SHQ1Q6PI26 577 aaKnown RBP14.37□□□□□ -0.11
NUP54-217ENST00000514987 DHRS4L2Q6PKH6 230 aa14.37□□□□□ -0.11
NUP54-217ENST00000514987 SPESP1Q6UW49 350 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms