RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 MSS51Q4VC12 460 aa9.98□□□□□ -0.81
HMGXB3-205ENST00000514469 SPANXN3Q5MJ09 141 aa9.98□□□□□ -0.81
HMGXB3-205ENST00000514469 LRRC8EQ6NSJ5 796 aa9.98□□□□□ -0.81
HMGXB3-205ENST00000514469 FBXO42Q6P3S6 717 aa9.98□□□□□ -0.81
HMGXB3-205ENST00000514469 UBE2R2Q712K3 238 aaPredicted RBP9.98□□□□□ -0.81
HMGXB3-205ENST00000514469 PIWIL4Q7Z3Z4 852 aaKnown RBP9.98□□□□□ -0.81
HMGXB3-205ENST00000514469 PCGF5Q86SE9 256 aa9.98□□□□□ -0.81
HMGXB3-205ENST00000514469 GALNT7Q86SF2 657 aa9.98□□□□□ -0.81
HMGXB3-205ENST00000514469 ARHGEF39Q8N4T4 335 aa9.98□□□□□ -0.81
HMGXB3-205ENST00000514469 PNPLA2Q96AD5 504 aa9.98□□□□□ -0.81
HMGXB3-205ENST00000514469 NAT9Q9BTE0 207 aa9.98□□□□□ -0.81
HMGXB3-205ENST00000514469 SOX17Q9H6I2 414 aaPredicted RBP9.98□□□□□ -0.81
HMGXB3-205ENST00000514469 ZNF552Q9H707 407 aaPredicted RBP9.98□□□□□ -0.81
HMGXB3-205ENST00000514469 PLAC1Q9HBJ0 212 aa9.98□□□□□ -0.81
HMGXB3-205ENST00000514469 ZC3H7BQ9UGR2 993 aaKnown RBP9.98□□□□□ -0.81
HMGXB3-205ENST00000514469 TRMT6Q9UJA5 497 aaKnown RBP9.98□□□□□ -0.81
HMGXB3-205ENST00000514469 CDC23Q9UJX2 597 aa9.98□□□□□ -0.81
HMGXB3-205ENST00000514469 FBXL4Q9UKA2 621 aa9.98□□□□□ -0.81
HMGXB3-205ENST00000514469 MAP4K5Q9Y4K4 846 aa9.98□□□□□ -0.81
HMGXB3-205ENST00000514469 HS3ST3B1Q9Y662 390 aa9.98□□□□□ -0.81
HMGXB3-205ENST00000514469 MAU2Q9Y6X3 613 aa9.98□□□□□ -0.81
HMGXB3-205ENST00000514469 PCM1Q15154 2024 aa9.98□□□□□ -0.81
HMGXB3-205ENST00000514469 IGLV3-12A0A075B6K2 115 aa9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 H0YGG7 62 aa9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 ZBTB14O43829 449 aa9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 KLHL41O60662 606 aa9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 IPO13O94829 963 aaKnown RBP9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 SYF2O95926 243 aaKnown RBP9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 ALPPP05187 535 aa9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 EIF2S1P05198 315 aaKnown RBP9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 GABRB3P28472 473 aa9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 UQCRFS1P47985 274 aa9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 ARF3P61204 181 aaPredicted RBP9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 TBPL1P62380 186 aa9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 ABATP80404 500 aa9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 RELAQ04206 551 aa9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 SRSF1Q07955 248 aaKnown RBP eCLIP9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 AIMP2Q13155 320 aaKnown RBP9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 SP140Q13342 867 aa9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 TSTA3Q13630 321 aaPredicted RBP9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 UBAP2LQ14157 1087 aaKnown RBP9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 MUM1Q2TAK8 710 aa9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 PRR30Q53SZ7 412 aaPredicted RBP9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 RBM20Q5T481 1227 aaKnown RBP9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 KIRREL2Q6UWL6 708 aa9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 IGFL3Q6UXB1 125 aa9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 SHISA6Q6ZSJ9 500 aa9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 KIAA0408Q6ZU52 694 aa9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 SYDE1Q6ZW31 735 aaPredicted RBP9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 CREG2Q8IUH2 290 aa9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 IGDCC3Q8IVU1 814 aa9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 CSNK1A1LQ8N752 337 aa9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 EFCAB3Q8N7B9 438 aa9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 GALNT11Q8NCW6 608 aa9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 GABPB2Q8TAK5 448 aaPredicted RBP9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 MVB12AQ96EY5 273 aa9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 CERS2Q96G23 380 aa9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 PDLIM2Q96JY6 352 aa9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 CABS1Q96KC9 395 aa9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 RUNDC3BQ96NL0 473 aa9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 OR2A5Q96R48 311 aa9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 NDNQ99608 321 aa9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 WDR83Q9BRX9 315 aaKnown RBP9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 MFRPQ9BY79 579 aa9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 ZNF304Q9HCX3 659 aa9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 ATP13A2Q9NQ11 1180 aa9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 SEMA3GQ9NS98 782 aa9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 CUEDC1Q9NWM3 386 aaPredicted RBP9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 UTP6Q9NYH9 597 aaKnown RBP9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 STOX2Q9P2F5 926 aaPredicted RBP9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 ADAMTS6Q9UKP5 1117 aa9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 RUVBL1Q9Y265 456 aaKnown RBP9.97□□□□□ -0.81
HMGXB3-205ENST00000514469 HAT1O14929 419 aa9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 P2RX6O15547 441 aa9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 ALOX12BO75342 701 aa9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 VPS4BO75351 444 aa9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 AHSGP02765 367 aa9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 C8GP07360 202 aa9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 ZGLP1P0C6A0 271 aa9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 FBLP22087 321 aaKnown RBP9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 CARSP49589 748 aaKnown RBP9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 CDKN2DP55273 166 aa9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 DR1Q01658 176 aa9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 KLC1Q07866 573 aa9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 DSG2Q14126 1118 aa9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 MORF4L2Q15014 288 aa9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 INPP5JQ15735 1006 aaPredicted RBP9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 RBBP7Q16576 425 aa9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 HKDC1Q2TB90 917 aa9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 BBS9Q3SYG4 887 aa9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 TUBB8Q3ZCM7 444 aa9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 GARNL3Q5VVW2 1013 aa9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 PRAMEF13Q5VWM6 474 aa9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 STEAP4Q687X5 459 aa9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 UGT3A1Q6NUS8 523 aa9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 FAM26EQ8N5C1 309 aa9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 OR11G2Q8NGC1 345 aa9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 STT3BQ8TCJ2 826 aa9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 EEF1AKMT1Q8WVE0 214 aa9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 COL26A1Q96A83 441 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms