RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 ZNF358Q9NW07 568 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 LNPEPQ9UIQ6 1025 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 TRMT6Q9UJA5 497 aaKnown RBP8.04□□□□□ -1.12
CCL28-204ENST00000514421 ICKQ9UPZ9 632 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.04□□□□□ -1.12
CCL28-204ENST00000514421 PCDHGA3Q9Y5H0 932 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 CACNA1BQ00975 2339 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 SEC16AO15027 2179 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 ANKRD11Q6UB99 2663 aaPredicted RBP8.03□□□□□ -1.12
CCL28-204ENST00000514421 IGHV5-51A0A0C4DH38 117 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 PIPSLA2A3N6 862 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 GSAPA4D1B5 854 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 TLCD2A6NGC4 264 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 SLC9B1P1A6NJY1 282 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 ISM1B1AKI9 464 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 ANKRD65E5RJM6 399 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 GFYI3L273 518 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 POLR1CO15160 346 aaPredicted RBP8.03□□□□□ -1.12
CCL28-204ENST00000514421 RRP8O43159 456 aaKnown RBP8.03□□□□□ -1.12
CCL28-204ENST00000514421 MAP3K7O43318 606 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 TLX3O43711 291 aaPredicted RBP8.03□□□□□ -1.12
CCL28-204ENST00000514421 ITM2AO43736 263 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 PSIP1O75475 530 aaKnown RBP8.03□□□□□ -1.12
CCL28-204ENST00000514421 ZBTB11O95625 1053 aaPredicted RBP8.03□□□□□ -1.12
CCL28-204ENST00000514421 CATP04040 527 aaKnown RBP8.03□□□□□ -1.12
CCL28-204ENST00000514421 CHRM5P08912 532 aaPredicted RBP8.03□□□□□ -1.12
CCL28-204ENST00000514421 MYL2P10916 166 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 NEFHP12036 1026 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 CDH3P22223 829 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 MAP4P27816 1152 aaKnown RBP8.03□□□□□ -1.12
CCL28-204ENST00000514421 HSD17B2P37059 387 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 ABCG1P45844 678 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 ARFIP2P53365 341 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 CDKN2DP55273 166 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 RAB15P59190 212 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 PPP1CAP62136 330 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 HSD11B2P80365 405 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 NFKB2Q00653 900 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 GALNT1Q10472 559 aaPredicted RBP8.03□□□□□ -1.12
CCL28-204ENST00000514421 ASPHQ12797 758 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 PDAP1Q13442 181 aaKnown RBP8.03□□□□□ -1.12
CCL28-204ENST00000514421 TUBB3Q13509 450 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 KIR2DS3Q14952 304 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 ACAP2Q15057 778 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 FAM83EQ2M2I3 478 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 TECRLQ5HYJ1 363 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 RBM20Q5T481 1227 aaKnown RBP8.03□□□□□ -1.12
CCL28-204ENST00000514421 TMTC4Q5T4D3 741 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 DCAF12Q5T6F0 453 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 PAQR3Q6TCH7 311 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 CEACAM20Q6UY09 585 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 FAM129CQ86XR2 697 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 D2HGDHQ8N465 521 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 BMPERQ8N8U9 685 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 FBXO15Q8NCQ5 510 aaPredicted RBP8.03□□□□□ -1.12
CCL28-204ENST00000514421 ZNF248Q8NDW4 579 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 OR9A1PQ8NGU1 263 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 OR2L8Q8NGY9 312 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 GIMAP7Q8NHV1 300 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 CD200R1Q8TD46 325 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 EEF1AKMT1Q8WVE0 214 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 KCTD4Q8WVF5 259 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 SREK1Q8WXA9 508 aaKnown RBP8.03□□□□□ -1.12
CCL28-204ENST00000514421 ASB11Q8WXH4 323 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 CCDC126Q96EE4 140 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 PDLIM5Q96HC4 596 aaKnown RBP8.03□□□□□ -1.12
CCL28-204ENST00000514421 ELMO2Q96JJ3 720 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 SLC41A2Q96JW4 573 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 TEFMQ96QE5 360 aaKnown RBP8.03□□□□□ -1.12
CCL28-204ENST00000514421 OR2A14Q96R47 310 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 NRTNQ99748 197 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 OLFM1Q99784 485 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 DDA1Q9BW61 102 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 RAB11FIP5Q9BXF6 653 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 TMEM120AQ9BXJ8 343 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 TWSG1Q9GZX9 223 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 DRC3Q9H069 523 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 LRMDAQ9H2I8 198 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 MRPL46Q9H2W6 279 aaKnown RBP8.03□□□□□ -1.12
CCL28-204ENST00000514421 SYTL2Q9HCH5 934 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 TXLNGQ9NUQ3 528 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 ACTR10Q9NZ32 417 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 POMT2Q9UKY4 750 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 ZMIZ1Q9ULJ6 1067 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 PLAGL1Q9UM63 463 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 RAXQ9Y2V3 346 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 PCDHB11Q9Y5F2 797 aa8.03□□□□□ -1.12
CCL28-204ENST00000514421 CAPN14A8MX76 684 aa8.02□□□□□ -1.13
CCL28-204ENST00000514421 C9orf172C9J069 976 aa8.02□□□□□ -1.13
CCL28-204ENST00000514421 SLC16A5O15375 505 aa8.02□□□□□ -1.13
CCL28-204ENST00000514421 PHGDHO43175 533 aaKnown RBP8.02□□□□□ -1.13
CCL28-204ENST00000514421 DLX3O60479 287 aa8.02□□□□□ -1.13
CCL28-204ENST00000514421 NPHS1O60500 1241 aa8.02□□□□□ -1.13
CCL28-204ENST00000514421 FKBP9O95302 570 aa8.02□□□□□ -1.13
CCL28-204ENST00000514421 RBP1P09455 135 aa8.02□□□□□ -1.13
CCL28-204ENST00000514421 LTA4HP09960 611 aaKnown RBP8.02□□□□□ -1.13
CCL28-204ENST00000514421 SAT1P21673 171 aa8.02□□□□□ -1.13
CCL28-204ENST00000514421 ATP5F1P24539 256 aaPredicted RBP8.02□□□□□ -1.13
CCL28-204ENST00000514421 CD82P27701 267 aa8.02□□□□□ -1.13
CCL28-204ENST00000514421 PKLRP30613 574 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms