RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 SUZ12Q15022 739 aaKnown RBP7.21□□□□□ -1.26
CLIP1-205ENST00000514271 SIGIRRQ6IA17 410 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 PNCKQ6P2M8 343 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 THAP5Q7Z6K1 395 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 GALNT5Q7Z7M9 940 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 LURAP1LQ8IV03 231 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 OFCC1Q8IZS5 231 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 SVOPLQ8N434 492 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 SFRP1Q8N474 314 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 ABTB1Q969K4 478 aaPredicted RBP7.21□□□□□ -1.26
CLIP1-205ENST00000514271 MED30Q96HR3 178 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 DCUN1D5Q9BTE7 237 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 IKZF5Q9H5V7 419 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 WDCPQ9H6R7 721 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 GKN1Q9NS71 199 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 GID8Q9NWU2 228 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 DDIT4Q9NX09 232 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 NEMP2A6NFY4 417 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 A8MVJ9 347 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 M0QYT0 321 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 M0R296 226 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 TXNDC9O14530 226 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 GREM1O60565 184 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 KATNA1O75449 491 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 PRKD3O94806 890 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 PRAMEF12O95522 483 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 PGRP06401 933 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 SRPRAP08240 638 aaKnown RBP7.2□□□□□ -1.26
CLIP1-205ENST00000514271 M6PRP20645 277 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 YAP1P46937 504 aaKnown RBP7.2□□□□□ -1.26
CLIP1-205ENST00000514271 IFRD2Q12894 506 aaPredicted RBP7.2□□□□□ -1.26
CLIP1-205ENST00000514271 SEMA3AQ14563 771 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 CDK10Q15131 360 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 DHCR24Q15392 516 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 ZNF528Q3MIS6 628 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 GLYR1Q49A26 553 aaPredicted RBP7.2□□□□□ -1.26
CLIP1-205ENST00000514271 ANKRD39Q53RE8 183 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 MS4A13Q5J8X5 152 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 PITRM1Q5JRX3 1037 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 SYPL2Q5VXT5 272 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 TMEM214Q6NUQ4 689 aaKnown RBP7.2□□□□□ -1.26
CLIP1-205ENST00000514271 SPATA19Q7Z5L4 167 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 CYP4Z1Q86W10 505 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 TAB3Q8N5C8 712 aaPredicted RBP7.2□□□□□ -1.26
CLIP1-205ENST00000514271 FGF14Q92915 247 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 NUSAP1Q9BXS6 441 aaKnown RBP7.2□□□□□ -1.26
CLIP1-205ENST00000514271 MFSD1Q9H3U5 465 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 IL1RAPQ9NPH3 570 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 PRDM6Q9NQX0 595 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 BTRCQ9Y297 605 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 DSPPQ9NZW4 1301 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 FAM95CA0A1B0GW59 222 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 E2F3O00716 465 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 KCNH1O95259 989 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 ALPPP05187 535 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 RAP2AP10114 183 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 RHOQP17081 205 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 S100A5P33763 92 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 ADRA1BP35368 520 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 YBEYP58557 167 aaPredicted RBP7.2□□□□□ -1.26
CLIP1-205ENST00000514271 RIN1Q13671 783 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 TMEM196Q5HYL7 178 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 LCE2DQ5TA82 110 aaPredicted RBP7.2□□□□□ -1.26
CLIP1-205ENST00000514271 LAMTOR1Q6IAA8 161 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 SHQ1Q6PI26 577 aaKnown RBP7.2□□□□□ -1.26
CLIP1-205ENST00000514271 ARMC8Q8IUR7 673 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 DHRSXQ8N5I4 330 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 ZSWIM3Q96MP5 696 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 KXD1Q9BQD3 176 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 TRIM8Q9BZR9 551 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 OR2B2Q9GZK3 357 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 RNF38Q9H0F5 515 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 C20orf96Q9NUD7 363 aaPredicted RBP7.2□□□□□ -1.26
CLIP1-205ENST00000514271 DCAF13Q9NV06 445 aaKnown RBP7.2□□□□□ -1.26
CLIP1-205ENST00000514271 FBXO4Q9UKT5 387 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 RUVBL2Q9Y230 463 aaKnown RBP7.2□□□□□ -1.26
CLIP1-205ENST00000514271 MAU2Q9Y6X3 613 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 KMT2EQ8IZD2 1858 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 FAM149AA5PLN7 773 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 STX16O14662 325 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 HAT1O14929 419 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 SRP72O76094 671 aaKnown RBP7.2□□□□□ -1.26
CLIP1-205ENST00000514271 FKBP9O95302 570 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 MAP3K6O95382 1288 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 CYP17A1P05093 508 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 HNRNPLP14866 589 aaKnown RBP eCLIP7.2□□□□□ -1.26
CLIP1-205ENST00000514271 TACR2P21452 398 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 HLA-FP30511 346 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 EFNB1P98172 346 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 CDH17Q12864 832 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 EOGTQ5NDL2 527 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 LETMD1Q6P1Q0 360 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 RPS27LQ71UM5 84 aaKnown RBP7.2□□□□□ -1.26
CLIP1-205ENST00000514271 SNX29P2Q8IUI4 249 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 SLC22A9Q8IVM8 553 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 OR4M2Q8NGB6 313 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 FIBINQ8TAL6 211 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 GPR152Q8TDT2 470 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 TMBIM1Q969X1 311 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 IMP4Q96G21 291 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms