RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 MED26O95402 600 aa13.23□□□□□ -0.29
SPCS3-204ENST00000513139 ITGAMP11215 1152 aa13.23□□□□□ -0.29
SPCS3-204ENST00000513139 CD99P14209 185 aa13.23□□□□□ -0.29
SPCS3-204ENST00000513139 FBLP22087 321 aaKnown RBP13.23□□□□□ -0.29
SPCS3-204ENST00000513139 CTNNA2P26232 953 aa13.23□□□□□ -0.29
SPCS3-204ENST00000513139 ART1P52961 327 aa13.23□□□□□ -0.29
SPCS3-204ENST00000513139 VSX2P58304 361 aaPredicted RBP13.23□□□□□ -0.29
SPCS3-204ENST00000513139 SRSF11Q05519 484 aaKnown RBP13.23□□□□□ -0.29
SPCS3-204ENST00000513139 OLIG2Q13516 323 aa13.23□□□□□ -0.29
SPCS3-204ENST00000513139 PRPSAP1Q14558 356 aa13.23□□□□□ -0.29
SPCS3-204ENST00000513139 MUM1Q2TAK8 710 aa13.23□□□□□ -0.29
SPCS3-204ENST00000513139 SYTL3Q4VX76 610 aa13.23□□□□□ -0.29
SPCS3-204ENST00000513139 ZNF766Q5HY98 468 aa13.23□□□□□ -0.29
SPCS3-204ENST00000513139 KAZNQ674X7 775 aa13.23□□□□□ -0.29
SPCS3-204ENST00000513139 DENND5AQ6IQ26 1287 aa13.23□□□□□ -0.29
SPCS3-204ENST00000513139 AADACL2Q6P093 401 aa13.23□□□□□ -0.29
SPCS3-204ENST00000513139 PRSS58Q8IYP2 241 aa13.23□□□□□ -0.29
SPCS3-204ENST00000513139 KATNAL2Q8IYT4 538 aa13.23□□□□□ -0.29
SPCS3-204ENST00000513139 RCOR2Q8IZ40 523 aa13.23□□□□□ -0.29
SPCS3-204ENST00000513139 DTWD1Q8N5C7 304 aa13.23□□□□□ -0.29
SPCS3-204ENST00000513139 LMNTD1Q8N9Z9 388 aa13.23□□□□□ -0.29
SPCS3-204ENST00000513139 CDKN2AIPNLQ96HQ2 116 aa13.23□□□□□ -0.29
SPCS3-204ENST00000513139 HES6Q96HZ4 224 aa13.23□□□□□ -0.29
SPCS3-204ENST00000513139 PPP1R2P1Q96PQ5 205 aa13.23□□□□□ -0.29
SPCS3-204ENST00000513139 ZNF700Q9H0M5 742 aa13.23□□□□□ -0.29
SPCS3-204ENST00000513139 C14orf105Q9NVL8 296 aa13.23□□□□□ -0.29
SPCS3-204ENST00000513139 STMN3Q9NZ72 180 aa13.23□□□□□ -0.29
SPCS3-204ENST00000513139 CDC14AQ9UNH5 594 aa13.23□□□□□ -0.29
SPCS3-204ENST00000513139 PRSS21Q9Y6M0 314 aa13.23□□□□□ -0.29
SPCS3-204ENST00000513139 FAM169AQ9Y6X4 670 aa13.23□□□□□ -0.29
SPCS3-204ENST00000513139 FLNAP21333 2647 aaKnown RBP13.23□□□□□ -0.29
SPCS3-204ENST00000513139 C3orf80F5H4A9 247 aa13.22□□□□□ -0.29
SPCS3-204ENST00000513139 F8W8V4 182 aa13.22□□□□□ -0.29
SPCS3-204ENST00000513139 PRPF4O43172 522 aaKnown RBP eCLIP13.22□□□□□ -0.29
SPCS3-204ENST00000513139 NADKO95544 446 aaPredicted RBP13.22□□□□□ -0.29
SPCS3-204ENST00000513139 OR56A5P0C7T3 313 aa13.22□□□□□ -0.29
SPCS3-204ENST00000513139 PRSS56P0CW18 603 aa13.22□□□□□ -0.29
SPCS3-204ENST00000513139 PMP22Q01453 160 aa13.22□□□□□ -0.29
SPCS3-204ENST00000513139 EEF1A2Q05639 463 aaKnown RBP13.22□□□□□ -0.29
SPCS3-204ENST00000513139 MEI1Q5TIA1 1274 aa13.22□□□□□ -0.29
SPCS3-204ENST00000513139 DCUN1D3Q8IWE4 304 aa13.22□□□□□ -0.29
SPCS3-204ENST00000513139 SLC22A15Q8IZD6 547 aa13.22□□□□□ -0.29
SPCS3-204ENST00000513139 EID3Q8N140 333 aa13.22□□□□□ -0.29
SPCS3-204ENST00000513139 LRRC45Q96CN5 670 aa13.22□□□□□ -0.29
SPCS3-204ENST00000513139 MVB12AQ96EY5 273 aa13.22□□□□□ -0.29
SPCS3-204ENST00000513139 REPIN1Q9BWE0 567 aaKnown RBP13.22□□□□□ -0.29
SPCS3-204ENST00000513139 HEMGNQ9BXL5 484 aa13.22□□□□□ -0.29
SPCS3-204ENST00000513139 TGIF2Q9GZN2 237 aa13.22□□□□□ -0.29
SPCS3-204ENST00000513139 ZC3H7BQ9UGR2 993 aaKnown RBP13.22□□□□□ -0.29
SPCS3-204ENST00000513139 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.22□□□□□ -0.29
SPCS3-204ENST00000513139 hCG_1818297A0A087WSY0 165 aa13.21□□□□□ -0.29
SPCS3-204ENST00000513139 E9PLN8 166 aa13.21□□□□□ -0.29
SPCS3-204ENST00000513139 TTI1O43156 1089 aa13.21□□□□□ -0.29
SPCS3-204ENST00000513139 CELA2AP08217 269 aa13.21□□□□□ -0.29
SPCS3-204ENST00000513139 PSMA3P25788 255 aa13.21□□□□□ -0.29
SPCS3-204ENST00000513139 PSMB4P28070 264 aa13.21□□□□□ -0.29
SPCS3-204ENST00000513139 RBL1P28749 1068 aa13.21□□□□□ -0.29
SPCS3-204ENST00000513139 RWDD2BP57060 319 aa13.21□□□□□ -0.29
SPCS3-204ENST00000513139 ZNF33BQ06732 778 aa13.21□□□□□ -0.29
SPCS3-204ENST00000513139 GRB7Q14451 532 aa13.21□□□□□ -0.29
SPCS3-204ENST00000513139 PCOLCEQ15113 449 aa13.21□□□□□ -0.29
SPCS3-204ENST00000513139 RPS6KA1Q15418 735 aa13.21□□□□□ -0.29
SPCS3-204ENST00000513139 ANKRD20A2Q5SQ80 823 aa13.21□□□□□ -0.29
SPCS3-204ENST00000513139 ANKRD20A1Q5TYW2 823 aa13.21□□□□□ -0.29
SPCS3-204ENST00000513139 ANKRD20A3Q5VUR7 823 aa13.21□□□□□ -0.29
SPCS3-204ENST00000513139 FRMPD2BQ6IN97 320 aa13.21□□□□□ -0.29
SPCS3-204ENST00000513139 UNC5DQ6UXZ4 953 aa13.21□□□□□ -0.29
SPCS3-204ENST00000513139 ARHGEF18Q6ZSZ5 1173 aa13.21□□□□□ -0.29
SPCS3-204ENST00000513139 CCDC50Q8IVM0 306 aa13.21□□□□□ -0.29
SPCS3-204ENST00000513139 SLC35F6Q8N357 371 aa13.21□□□□□ -0.29
SPCS3-204ENST00000513139 C2orf73Q8N5S3 287 aaPredicted RBP13.21□□□□□ -0.29
SPCS3-204ENST00000513139 UBL4BQ8N7F7 174 aa13.21□□□□□ -0.29
SPCS3-204ENST00000513139 TRIM58Q8NG06 486 aa13.21□□□□□ -0.29
SPCS3-204ENST00000513139 CA5BP1Q8WTZ4 195 aa13.21□□□□□ -0.29
SPCS3-204ENST00000513139 STYXQ8WUJ0 223 aa13.21□□□□□ -0.29
SPCS3-204ENST00000513139 HAUS1Q96CS2 278 aa13.21□□□□□ -0.29
SPCS3-204ENST00000513139 IMMP1LQ96LU5 166 aa13.21□□□□□ -0.29
SPCS3-204ENST00000513139 ALS2CR12Q96Q35 445 aa13.21□□□□□ -0.29
SPCS3-204ENST00000513139 TBL1YQ9BQ87 522 aa13.21□□□□□ -0.29
SPCS3-204ENST00000513139 VKORC1Q9BQB6 163 aa13.21□□□□□ -0.29
SPCS3-204ENST00000513139 TUBB6Q9BUF5 446 aa13.21□□□□□ -0.29
SPCS3-204ENST00000513139 RAB11FIP5Q9BXF6 653 aa13.21□□□□□ -0.29
SPCS3-204ENST00000513139 TRPC4Q9UBN4 977 aa13.21□□□□□ -0.29
SPCS3-204ENST00000513139 TNFRSF10DQ9UBN6 386 aa13.21□□□□□ -0.29
SPCS3-204ENST00000513139 PHF3Q92576 2039 aaKnown RBP13.21□□□□□ -0.29
SPCS3-204ENST00000513139 ASPDHA6ND91 283 aa13.2□□□□□ -0.3
SPCS3-204ENST00000513139 FOXO6A8MYZ6 492 aa13.2□□□□□ -0.3
SPCS3-204ENST00000513139 MIF4GDA9UHW6 222 aaKnown RBP13.2□□□□□ -0.3
SPCS3-204ENST00000513139 H7C0C1 242 aa13.2□□□□□ -0.3
SPCS3-204ENST00000513139 APOC4-APOC2K7ER74 178 aa13.2□□□□□ -0.3
SPCS3-204ENST00000513139 RASGRF2O14827 1237 aa13.2□□□□□ -0.3
SPCS3-204ENST00000513139 KIF5CO60282 957 aa13.2□□□□□ -0.3
SPCS3-204ENST00000513139 APOC2P02655 101 aa13.2□□□□□ -0.3
SPCS3-204ENST00000513139 HEXBP07686 556 aa13.2□□□□□ -0.3
SPCS3-204ENST00000513139 IGFBP2P18065 325 aa13.2□□□□□ -0.3
SPCS3-204ENST00000513139 ATP5OP48047 213 aa13.2□□□□□ -0.3
SPCS3-204ENST00000513139 ALDH6A1Q02252 535 aaKnown RBP13.2□□□□□ -0.3
SPCS3-204ENST00000513139 TMEM205Q6UW68 189 aa13.2□□□□□ -0.3
SPCS3-204ENST00000513139 NAPRTQ6XQN6 538 aa13.2□□□□□ -0.3
SPCS3-204ENST00000513139 NEK10Q6ZWH5 1172 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms