RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 KCNJ9Q92806 393 aa12.16□□□□□ -0.46
COL11A1-210ENST00000512756 BORCS6Q96GS4 357 aa12.16□□□□□ -0.46
COL11A1-210ENST00000512756 MND1Q9BWT6 205 aa12.16□□□□□ -0.46
COL11A1-210ENST00000512756 WDR26Q9H7D7 661 aa12.16□□□□□ -0.46
COL11A1-210ENST00000512756 SIX4Q9UIU6 781 aa12.16□□□□□ -0.46
COL11A1-210ENST00000512756 BAIAP2Q9UQB8 552 aa12.16□□□□□ -0.46
COL11A1-210ENST00000512756 FKBP7Q9Y680 259 aa12.16□□□□□ -0.46
COL11A1-210ENST00000512756 RHPN2P1A8MT19 583 aa12.16□□□□□ -0.46
COL11A1-210ENST00000512756 MID1O15344 667 aa12.16□□□□□ -0.46
COL11A1-210ENST00000512756 SLC31A1O15431 190 aa12.16□□□□□ -0.46
COL11A1-210ENST00000512756 TSPAN5P62079 268 aa12.16□□□□□ -0.46
COL11A1-210ENST00000512756 ZNF678Q5SXM1 525 aa12.16□□□□□ -0.46
COL11A1-210ENST00000512756 LINGO2Q7L985 606 aa12.16□□□□□ -0.46
COL11A1-210ENST00000512756 OSTM1Q86WC4 334 aa12.16□□□□□ -0.46
COL11A1-210ENST00000512756 MCEMP1Q8IX19 187 aa12.16□□□□□ -0.46
COL11A1-210ENST00000512756 NCSTNQ92542 709 aa12.16□□□□□ -0.46
COL11A1-210ENST00000512756 TSGA13Q96PP4 275 aa12.16□□□□□ -0.46
COL11A1-210ENST00000512756 GAL3ST4Q96RP7 486 aa12.16□□□□□ -0.46
COL11A1-210ENST00000512756 SMOQ99835 787 aa12.16□□□□□ -0.46
COL11A1-210ENST00000512756 UCK2Q9BZX2 261 aa12.16□□□□□ -0.46
COL11A1-210ENST00000512756 VRTNQ9H8Y1 702 aa12.16□□□□□ -0.46
COL11A1-210ENST00000512756 TM9SF3Q9HD45 589 aa12.16□□□□□ -0.46
COL11A1-210ENST00000512756 IFT46Q9NQC8 304 aa12.16□□□□□ -0.46
COL11A1-210ENST00000512756 SAP18O00422 153 aaKnown RBP12.15□□□□□ -0.46
COL11A1-210ENST00000512756 G6PDP11413 515 aa12.15□□□□□ -0.46
COL11A1-210ENST00000512756 CD72P21854 359 aa12.15□□□□□ -0.46
COL11A1-210ENST00000512756 CDH15P55291 814 aa12.15□□□□□ -0.46
COL11A1-210ENST00000512756 BNIP3Q12983 259 aa12.15□□□□□ -0.46
COL11A1-210ENST00000512756 MOGQ16653 247 aa12.15□□□□□ -0.46
COL11A1-210ENST00000512756 XKR4Q5GH76 650 aa12.15□□□□□ -0.46
COL11A1-210ENST00000512756 NXPE1Q8N323 547 aa12.15□□□□□ -0.46
COL11A1-210ENST00000512756 PEX13Q92968 403 aa12.15□□□□□ -0.46
COL11A1-210ENST00000512756 PSKH2Q96QS6 385 aa12.15□□□□□ -0.46
COL11A1-210ENST00000512756 RPF2Q9H7B2 306 aaKnown RBP12.15□□□□□ -0.46
COL11A1-210ENST00000512756 MKS1Q9NXB0 559 aa12.15□□□□□ -0.46
COL11A1-210ENST00000512756 ZNF224Q9NZL3 707 aa12.15□□□□□ -0.46
COL11A1-210ENST00000512756 MARK1Q9P0L2 795 aa12.15□□□□□ -0.46
COL11A1-210ENST00000512756 UNCXA6NJT0 531 aa12.15□□□□□ -0.46
COL11A1-210ENST00000512756 PRAMEF11O60813 436 aa12.15□□□□□ -0.46
COL11A1-210ENST00000512756 RFPL1O75677 317 aa12.15□□□□□ -0.46
COL11A1-210ENST00000512756 RCBTB2O95199 551 aa12.15□□□□□ -0.46
COL11A1-210ENST00000512756 SLC2A2P11168 524 aaPredicted RBP12.15□□□□□ -0.46
COL11A1-210ENST00000512756 FGF3P11487 239 aaPredicted RBP12.15□□□□□ -0.46
COL11A1-210ENST00000512756 DCDC1P59894 354 aa12.15□□□□□ -0.46
COL11A1-210ENST00000512756 ZNF773Q6PK81 442 aa12.15□□□□□ -0.46
COL11A1-210ENST00000512756 LMO3Q8TAP4 145 aa12.15□□□□□ -0.46
COL11A1-210ENST00000512756 PEBP4Q96S96 227 aa12.15□□□□□ -0.46
COL11A1-210ENST00000512756 CACNG4Q9UBN1 327 aa12.15□□□□□ -0.46
COL11A1-210ENST00000512756 PRSS51A0A1B0GVH4 220 aa12.15□□□□□ -0.46
COL11A1-210ENST00000512756 PSKH1P11801 424 aa12.15□□□□□ -0.46
COL11A1-210ENST00000512756 ZNF3P17036 446 aa12.15□□□□□ -0.46
COL11A1-210ENST00000512756 MYLK3Q32MK0 819 aa12.15□□□□□ -0.46
COL11A1-210ENST00000512756 ARSIQ5FYB1 569 aa12.15□□□□□ -0.46
COL11A1-210ENST00000512756 TPRG1LQ5T0D9 272 aa12.15□□□□□ -0.46
COL11A1-210ENST00000512756 PRR23CQ6ZRP0 262 aa12.15□□□□□ -0.46
COL11A1-210ENST00000512756 ABHD13Q7L211 337 aa12.15□□□□□ -0.46
COL11A1-210ENST00000512756 HDDC3Q8N4P3 179 aa12.15□□□□□ -0.46
COL11A1-210ENST00000512756 B3GALT6Q96L58 329 aa12.15□□□□□ -0.46
COL11A1-210ENST00000512756 SLC38A3Q99624 504 aa12.15□□□□□ -0.46
COL11A1-210ENST00000512756 TPT1P8Q9HAU6 139 aa12.15□□□□□ -0.46
COL11A1-210ENST00000512756 NLE1Q9NVX2 485 aaPredicted RBP12.15□□□□□ -0.46
COL11A1-210ENST00000512756 E7ESA3 106 aa12.15□□□□□ -0.47
COL11A1-210ENST00000512756 ABCB7O75027 752 aa12.15□□□□□ -0.47
COL11A1-210ENST00000512756 ENTPD6O75354 484 aa12.15□□□□□ -0.47
COL11A1-210ENST00000512756 INMTO95050 263 aa12.15□□□□□ -0.47
COL11A1-210ENST00000512756 CHRM5P08912 532 aaPredicted RBP12.15□□□□□ -0.47
COL11A1-210ENST00000512756 LINGO3P0C6S8 592 aa12.15□□□□□ -0.47
COL11A1-210ENST00000512756 MAGEA11P43364 429 aa12.15□□□□□ -0.47
COL11A1-210ENST00000512756 MADCAM1Q13477 382 aa12.15□□□□□ -0.47
COL11A1-210ENST00000512756 KCNC3Q14003 757 aa12.15□□□□□ -0.47
COL11A1-210ENST00000512756 MS4A13Q5J8X5 152 aa12.15□□□□□ -0.47
COL11A1-210ENST00000512756 LRRTM4Q86VH4 590 aa12.15□□□□□ -0.47
COL11A1-210ENST00000512756 OR9I1Q8NGQ6 314 aa12.15□□□□□ -0.47
COL11A1-210ENST00000512756 ZNF420Q8TAQ5 688 aaPredicted RBP12.15□□□□□ -0.47
COL11A1-210ENST00000512756 TNFRSF10DQ9UBN6 386 aa12.15□□□□□ -0.47
COL11A1-210ENST00000512756 MKLN1Q9UL63 735 aa12.15□□□□□ -0.47
COL11A1-210ENST00000512756 PHF24Q9UPV7 400 aa12.15□□□□□ -0.47
COL11A1-210ENST00000512756 PIK3C2AO00443 1686 aa12.15□□□□□ -0.47
COL11A1-210ENST00000512756 VIRMAQ69YN4 1812 aaKnown RBP12.14□□□□□ -0.47
COL11A1-210ENST00000512756 TMEM150CB9EJG8 249 aa12.14□□□□□ -0.47
COL11A1-210ENST00000512756 M0QX08 132 aa12.14□□□□□ -0.47
COL11A1-210ENST00000512756 OAS1P00973 400 aaKnown RBP12.14□□□□□ -0.47
COL11A1-210ENST00000512756 ACADVLP49748 655 aa12.14□□□□□ -0.47
COL11A1-210ENST00000512756 EIF5AP63241 154 aaKnown RBP12.14□□□□□ -0.47
COL11A1-210ENST00000512756 KIAA1161Q6NSJ0 714 aa12.14□□□□□ -0.47
COL11A1-210ENST00000512756 DNAJA4Q8WW22 397 aaPredicted RBP12.14□□□□□ -0.47
COL11A1-210ENST00000512756 IL4I1Q96RQ9 567 aa12.14□□□□□ -0.47
COL11A1-210ENST00000512756 CTPS2Q9NRF8 586 aa12.14□□□□□ -0.47
COL11A1-210ENST00000512756 MED11Q9P086 117 aa12.14□□□□□ -0.47
COL11A1-210ENST00000512756 ELOA3DA6NLF2 546 aaPredicted RBP12.14□□□□□ -0.47
COL11A1-210ENST00000512756 CA12O43570 354 aa12.14□□□□□ -0.47
COL11A1-210ENST00000512756 HLA-DPB1P04440 258 aa12.14□□□□□ -0.47
COL11A1-210ENST00000512756 TXNL4AP83876 142 aaKnown RBP12.14□□□□□ -0.47
COL11A1-210ENST00000512756 GPR17Q13304 367 aa12.14□□□□□ -0.47
COL11A1-210ENST00000512756 TLR1Q15399 786 aa12.14□□□□□ -0.47
COL11A1-210ENST00000512756 ELOA3BQ3SY89 546 aa12.14□□□□□ -0.47
COL11A1-210ENST00000512756 LRRC73Q5JTD7 316 aa12.14□□□□□ -0.47
COL11A1-210ENST00000512756 C10orf62Q5T681 223 aaPredicted RBP12.14□□□□□ -0.47
COL11A1-210ENST00000512756 PRPF38BQ5VTL8 546 aaKnown RBP12.14□□□□□ -0.47
COL11A1-210ENST00000512756 SLC8B1Q6J4K2 584 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms