RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 SLMAPQ14BN4 828 aa15.24■□□□□ 0.03
DDX41-214ENST00000512334 TBR1Q16650 682 aa15.24■□□□□ 0.03
DDX41-214ENST00000512334 FRMPD2BQ6IN97 320 aa15.24■□□□□ 0.03
DDX41-214ENST00000512334 ZNF517Q6ZMY9 492 aaPredicted RBP15.24■□□□□ 0.03
DDX41-214ENST00000512334 TTLL10Q6ZVT0 673 aa15.24■□□□□ 0.03
DDX41-214ENST00000512334 FRA10AC1Q70Z53 315 aa15.24■□□□□ 0.03
DDX41-214ENST00000512334 RNF44Q7L0R7 432 aa15.24■□□□□ 0.03
DDX41-214ENST00000512334 LRRC56Q8IYG6 542 aaPredicted RBP15.24■□□□□ 0.03
DDX41-214ENST00000512334 ENDOVQ8N8Q3 282 aaKnown RBP15.24■□□□□ 0.03
DDX41-214ENST00000512334 PROKR1Q8TCW9 393 aa15.24■□□□□ 0.03
DDX41-214ENST00000512334 ANKRD49Q8WVL7 239 aa15.24■□□□□ 0.03
DDX41-214ENST00000512334 SLC39A7Q92504 469 aa15.24■□□□□ 0.03
DDX41-214ENST00000512334 CATSPER2Q96P56 530 aa15.24■□□□□ 0.03
DDX41-214ENST00000512334 GPR22Q99680 433 aa15.24■□□□□ 0.03
DDX41-214ENST00000512334 DPH2Q9BQC3 489 aaPredicted RBP15.24■□□□□ 0.03
DDX41-214ENST00000512334 UNKQ9C0B0 810 aaKnown RBP15.24■□□□□ 0.03
DDX41-214ENST00000512334 PCBD2Q9H0N5 130 aa15.24■□□□□ 0.03
DDX41-214ENST00000512334 TSPYL1Q9H0U9 437 aa15.24■□□□□ 0.03
DDX41-214ENST00000512334 NINJ2Q9NZG7 142 aa15.24■□□□□ 0.03
DDX41-214ENST00000512334 CTNNAL1Q9UBT7 734 aa15.24■□□□□ 0.03
DDX41-214ENST00000512334 SNX7Q9UNH6 387 aa15.24■□□□□ 0.03
DDX41-214ENST00000512334 ZFYVE26Q68DK2 2539 aa15.24■□□□□ 0.03
DDX41-214ENST00000512334 CHD6Q8TD26 2715 aa15.23■□□□□ 0.03
DDX41-214ENST00000512334 LOC105369274A0A096LPK9 316 aa15.23■□□□□ 0.03
DDX41-214ENST00000512334 IGKV1-8A0A0C4DH67 115 aa15.23■□□□□ 0.03
DDX41-214ENST00000512334 LOC102723532A0A0G2JNH3 316 aa15.23■□□□□ 0.03
DDX41-214ENST00000512334 RAB40ALP0C0E4 278 aa15.23■□□□□ 0.03
DDX41-214ENST00000512334 CCND1P24385 295 aa15.23■□□□□ 0.03
DDX41-214ENST00000512334 DCDP81605 110 aaKnown RBP15.23■□□□□ 0.03
DDX41-214ENST00000512334 LY6DQ14210 128 aa15.23■□□□□ 0.03
DDX41-214ENST00000512334 SLC9A5Q14940 896 aa15.23■□□□□ 0.03
DDX41-214ENST00000512334 UAP1Q16222 522 aaPredicted RBP15.23■□□□□ 0.03
DDX41-214ENST00000512334 DEFB109BQ30KR1 87 aa15.23■□□□□ 0.03
DDX41-214ENST00000512334 WASHC2DQ5SRD0 308 aa15.23■□□□□ 0.03
DDX41-214ENST00000512334 MLIPQ5VWP3 458 aa15.23■□□□□ 0.03
DDX41-214ENST00000512334 CAPN13Q6MZZ7 669 aaPredicted RBP15.23■□□□□ 0.03
DDX41-214ENST00000512334 FBXO42Q6P3S6 717 aa15.23■□□□□ 0.03
DDX41-214ENST00000512334 BORAQ6PGQ7 559 aa15.23■□□□□ 0.03
DDX41-214ENST00000512334 PCSK4Q6UW60 755 aa15.23■□□□□ 0.03
DDX41-214ENST00000512334 FAM198BQ6UWH4 519 aa15.23■□□□□ 0.03
DDX41-214ENST00000512334 SBSNQ6UWP8 590 aa15.23■□□□□ 0.03
DDX41-214ENST00000512334 RAPH1Q70E73 1250 aa15.23■□□□□ 0.03
DDX41-214ENST00000512334 PAQR7Q86WK9 346 aa15.23■□□□□ 0.03
DDX41-214ENST00000512334 C17orf64Q86WR6 236 aa15.23■□□□□ 0.03
DDX41-214ENST00000512334 OR4N4Q8N0Y3 316 aa15.23■□□□□ 0.03
DDX41-214ENST00000512334 SPATA6LQ8N4H0 392 aa15.23■□□□□ 0.03
DDX41-214ENST00000512334 ATL1Q8WXF7 558 aa15.23■□□□□ 0.03
DDX41-214ENST00000512334 GBP5Q96PP8 586 aa15.23■□□□□ 0.03
DDX41-214ENST00000512334 EGFL8Q99944 293 aa15.23■□□□□ 0.03
DDX41-214ENST00000512334 NLNQ9BYT8 704 aa15.23■□□□□ 0.03
DDX41-214ENST00000512334 CDC42EP4Q9H3Q1 356 aaKnown RBP15.23■□□□□ 0.03
DDX41-214ENST00000512334 CUTCQ9NTM9 273 aa15.23■□□□□ 0.03
DDX41-214ENST00000512334 CUEDC1Q9NWM3 386 aaPredicted RBP15.23■□□□□ 0.03
DDX41-214ENST00000512334 IFT80Q9P2H3 777 aaPredicted RBP15.23■□□□□ 0.03
DDX41-214ENST00000512334 GPN3Q9UHW5 284 aaPredicted RBP15.23■□□□□ 0.03
DDX41-214ENST00000512334 NOVA2Q9UNW9 492 aaKnown RBP15.23■□□□□ 0.03
DDX41-214ENST00000512334 H0YGG7 62 aa15.22■□□□□ 0.03
DDX41-214ENST00000512334 H7BY64 318 aa15.22■□□□□ 0.03
DDX41-214ENST00000512334 HAT1O14929 419 aa15.22■□□□□ 0.03
DDX41-214ENST00000512334 ACSL3O95573 720 aa15.22■□□□□ 0.03
DDX41-214ENST00000512334 RHOXF2BP0C7M4 288 aa15.22■□□□□ 0.03
DDX41-214ENST00000512334 EZRP15311 586 aaKnown RBP15.22■□□□□ 0.03
DDX41-214ENST00000512334 RAB10P61026 200 aa15.22■□□□□ 0.03
DDX41-214ENST00000512334 ARF3P61204 181 aaPredicted RBP15.22■□□□□ 0.03
DDX41-214ENST00000512334 NCF4Q15080 339 aa15.22■□□□□ 0.03
DDX41-214ENST00000512334 TSNQ15631 228 aaKnown RBP15.22■□□□□ 0.03
DDX41-214ENST00000512334 FAM214AQ32MH5 1076 aa15.22■□□□□ 0.03
DDX41-214ENST00000512334 LINC00303Q3SY05 128 aa15.22■□□□□ 0.03
DDX41-214ENST00000512334 CRTC2Q53ET0 693 aaPredicted RBP15.22■□□□□ 0.03
DDX41-214ENST00000512334 ZNF385CQ66K41 422 aaPredicted RBP15.22■□□□□ 0.03
DDX41-214ENST00000512334 ZNF425Q6IV72 752 aa15.22■□□□□ 0.03
DDX41-214ENST00000512334 ADAMTSL2Q86TH1 951 aa15.22■□□□□ 0.03
DDX41-214ENST00000512334 SYVN1Q86TM6 617 aa15.22■□□□□ 0.03
DDX41-214ENST00000512334 IFT20Q8IY31 132 aa15.22■□□□□ 0.03
DDX41-214ENST00000512334 ANKRD7Q92527 254 aa15.22■□□□□ 0.03
DDX41-214ENST00000512334 RERGQ96A58 199 aaPredicted RBP15.22■□□□□ 0.03
DDX41-214ENST00000512334 PYCR2Q96C36 320 aa15.22■□□□□ 0.03
DDX41-214ENST00000512334 FBXL8Q96CD0 374 aa15.22■□□□□ 0.03
DDX41-214ENST00000512334 WBP1Q96G27 269 aa15.22■□□□□ 0.03
DDX41-214ENST00000512334 ZNF285Q96NJ3 590 aa15.22■□□□□ 0.03
DDX41-214ENST00000512334 PRAP1Q96NZ9 151 aa15.22■□□□□ 0.03
DDX41-214ENST00000512334 C17orf62Q9BQA9 187 aa15.22■□□□□ 0.03
DDX41-214ENST00000512334 RHOXF2Q9BQY4 288 aa15.22■□□□□ 0.03
DDX41-214ENST00000512334 HEATR5BQ9P2D3 2071 aa15.21■□□□□ 0.03
DDX41-214ENST00000512334 A0A1B0GX78 115 aa15.21■□□□□ 0.03
DDX41-214ENST00000512334 HYKKA2RU49 373 aa15.21■□□□□ 0.03
DDX41-214ENST00000512334 ANXA5P08758 320 aa15.21■□□□□ 0.03
DDX41-214ENST00000512334 FURINP09958 794 aa15.21■□□□□ 0.03
DDX41-214ENST00000512334 FAM87AP0C7U9 286 aa15.21■□□□□ 0.03
DDX41-214ENST00000512334 CCDC166P0CW27 439 aa15.21■□□□□ 0.03
DDX41-214ENST00000512334 HRH2P25021 359 aa15.21■□□□□ 0.03
DDX41-214ENST00000512334 ECHS1P30084 290 aa15.21■□□□□ 0.03
DDX41-214ENST00000512334 CCR10P46092 362 aa15.21■□□□□ 0.03
DDX41-214ENST00000512334 NFKB2Q00653 900 aa15.21■□□□□ 0.03
DDX41-214ENST00000512334 PPP1R3AQ16821 1122 aa15.21■□□□□ 0.03
DDX41-214ENST00000512334 NKAIN1Q4KMZ8 207 aa15.21■□□□□ 0.03
DDX41-214ENST00000512334 UBAP2Q5T6F2 1119 aaKnown RBP15.21■□□□□ 0.03
DDX41-214ENST00000512334 FAM69BQ5VUD6 431 aa15.21■□□□□ 0.03
DDX41-214ENST00000512334 YOD1Q5VVQ6 348 aaPredicted RBP15.21■□□□□ 0.03
DDX41-214ENST00000512334 LCTLQ6UWM7 567 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms