RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 SP140Q13342 867 aa15.44■□□□□ 0.06
PDLIM5-212ENST00000509333 NCF4Q15080 339 aa15.44■□□□□ 0.06
PDLIM5-212ENST00000509333 FAM214AQ32MH5 1076 aa15.44■□□□□ 0.06
PDLIM5-212ENST00000509333 NKAIN1Q4KMZ8 207 aa15.44■□□□□ 0.06
PDLIM5-212ENST00000509333 MRPL14Q6P1L8 145 aaKnown RBP15.44■□□□□ 0.06
PDLIM5-212ENST00000509333 AGTRAPQ6RW13 159 aa15.44■□□□□ 0.06
PDLIM5-212ENST00000509333 TTLL10Q6ZVT0 673 aa15.44■□□□□ 0.06
PDLIM5-212ENST00000509333 RNF44Q7L0R7 432 aa15.44■□□□□ 0.06
PDLIM5-212ENST00000509333 THAP4Q8WY91 577 aa15.44■□□□□ 0.06
PDLIM5-212ENST00000509333 ANKRD7Q92527 254 aa15.44■□□□□ 0.06
PDLIM5-212ENST00000509333 OR2A5Q96R48 311 aa15.44■□□□□ 0.06
PDLIM5-212ENST00000509333 RHOJQ9H4E5 214 aa15.44■□□□□ 0.06
PDLIM5-212ENST00000509333 ZDHHC18Q9NUE0 388 aa15.44■□□□□ 0.06
PDLIM5-212ENST00000509333 IRAK4Q9NWZ3 460 aa15.44■□□□□ 0.06
PDLIM5-212ENST00000509333 ANKMY1Q9P2S6 941 aa15.44■□□□□ 0.06
PDLIM5-212ENST00000509333 TUBD1Q9UJT1 453 aa15.44■□□□□ 0.06
PDLIM5-212ENST00000509333 IKZF3Q9UKT9 509 aa15.44■□□□□ 0.06
PDLIM5-212ENST00000509333 FER1L5A0AVI2 2057 aa15.44■□□□□ 0.06
PDLIM5-212ENST00000509333 ESYT3A0FGR9 886 aa15.43■□□□□ 0.06
PDLIM5-212ENST00000509333 HYKKA2RU49 373 aa15.43■□□□□ 0.06
PDLIM5-212ENST00000509333 B8ZZF3 427 aa15.43■□□□□ 0.06
PDLIM5-212ENST00000509333 H7BY64 318 aa15.43■□□□□ 0.06
PDLIM5-212ENST00000509333 CNOT3O75175 753 aaKnown RBP15.43■□□□□ 0.06
PDLIM5-212ENST00000509333 MED26O95402 600 aa15.43■□□□□ 0.06
PDLIM5-212ENST00000509333 HIST1H2AGP0C0S8 130 aaPredicted RBP15.43■□□□□ 0.06
PDLIM5-212ENST00000509333 NPPBP16860 134 aa15.43■□□□□ 0.06
PDLIM5-212ENST00000509333 HIST1H2ADP20671 130 aa15.43■□□□□ 0.06
PDLIM5-212ENST00000509333 SAT1P21673 171 aa15.43■□□□□ 0.06
PDLIM5-212ENST00000509333 NAE1Q13564 534 aa15.43■□□□□ 0.06
PDLIM5-212ENST00000509333 IL10RAQ13651 578 aa15.43■□□□□ 0.06
PDLIM5-212ENST00000509333 NAA25Q14CX7 972 aa15.43■□□□□ 0.06
PDLIM5-212ENST00000509333 PRTGQ2VWP7 1150 aa15.43■□□□□ 0.06
PDLIM5-212ENST00000509333 MBOAT1Q6ZNC8 495 aa15.43■□□□□ 0.06
PDLIM5-212ENST00000509333 OVCH1Q7RTY7 1134 aa15.43■□□□□ 0.06
PDLIM5-212ENST00000509333 APLFQ8IW19 511 aaPredicted RBP15.43■□□□□ 0.06
PDLIM5-212ENST00000509333 CEP97Q8IW35 865 aa15.43■□□□□ 0.06
PDLIM5-212ENST00000509333 TMEM151BQ8IW70 566 aa15.43■□□□□ 0.06
PDLIM5-212ENST00000509333 HIST1H2AHQ96KK5 128 aa15.43■□□□□ 0.06
PDLIM5-212ENST00000509333 PRAP1Q96NZ9 151 aa15.43■□□□□ 0.06
PDLIM5-212ENST00000509333 HIST1H2AJQ99878 128 aa15.43■□□□□ 0.06
PDLIM5-212ENST00000509333 ZFYVE21Q9BQ24 234 aa15.43■□□□□ 0.06
PDLIM5-212ENST00000509333 H2AFJQ9BTM1 129 aa15.43■□□□□ 0.06
PDLIM5-212ENST00000509333 DHRS4Q9BTZ2 278 aa15.43■□□□□ 0.06
PDLIM5-212ENST00000509333 PCBD2Q9H0N5 130 aa15.43■□□□□ 0.06
PDLIM5-212ENST00000509333 ATG10Q9H0Y0 220 aa15.43■□□□□ 0.06
PDLIM5-212ENST00000509333 SLC25A18Q9H1K4 315 aa15.43■□□□□ 0.06
PDLIM5-212ENST00000509333 CUTCQ9NTM9 273 aa15.43■□□□□ 0.06
PDLIM5-212ENST00000509333 TXLNGQ9NUQ3 528 aa15.43■□□□□ 0.06
PDLIM5-212ENST00000509333 TMEM184CQ9NVA4 438 aa15.43■□□□□ 0.06
PDLIM5-212ENST00000509333 DMGDHQ9UI17 866 aaKnown RBP15.43■□□□□ 0.06
PDLIM5-212ENST00000509333 ZNF462Q96JM2 2506 aa15.43■□□□□ 0.06
PDLIM5-212ENST00000509333 DSCR3O14972 297 aa15.42■□□□□ 0.06
PDLIM5-212ENST00000509333 CCNDBP1O95273 360 aa15.42■□□□□ 0.06
PDLIM5-212ENST00000509333 WISP3O95389 354 aaPredicted RBP15.42■□□□□ 0.06
PDLIM5-212ENST00000509333 CD63P08962 238 aa15.42■□□□□ 0.06
PDLIM5-212ENST00000509333 EMP3P54852 163 aa15.42■□□□□ 0.06
PDLIM5-212ENST00000509333 ILF2Q12905 390 aaKnown RBP15.42■□□□□ 0.06
PDLIM5-212ENST00000509333 KCNAB2Q13303 367 aa15.42■□□□□ 0.06
PDLIM5-212ENST00000509333 SSPNQ14714 243 aa15.42■□□□□ 0.06
PDLIM5-212ENST00000509333 THEMIS2Q5TEJ8 643 aa15.42■□□□□ 0.06
PDLIM5-212ENST00000509333 SBSNQ6UWP8 590 aa15.42■□□□□ 0.06
PDLIM5-212ENST00000509333 NKAPQ8N5F7 415 aaKnown RBP15.42■□□□□ 0.06
PDLIM5-212ENST00000509333 NOA1Q8NC60 698 aaKnown RBP15.42■□□□□ 0.06
PDLIM5-212ENST00000509333 ANKRD49Q8WVL7 239 aa15.42■□□□□ 0.06
PDLIM5-212ENST00000509333 ABHD17AQ96GS6 310 aa15.42■□□□□ 0.06
PDLIM5-212ENST00000509333 VPS39Q96JC1 886 aa15.42■□□□□ 0.06
PDLIM5-212ENST00000509333 CPNE1Q99829 537 aa15.42■□□□□ 0.06
PDLIM5-212ENST00000509333 C17orf62Q9BQA9 187 aa15.42■□□□□ 0.06
PDLIM5-212ENST00000509333 SGPP1Q9BX95 441 aa15.42■□□□□ 0.06
PDLIM5-212ENST00000509333 TRIM54Q9BYV2 358 aa15.42■□□□□ 0.06
PDLIM5-212ENST00000509333 ABCF3Q9NUQ8 709 aa15.42■□□□□ 0.06
PDLIM5-212ENST00000509333 CUEDC1Q9NWM3 386 aaPredicted RBP15.42■□□□□ 0.06
PDLIM5-212ENST00000509333 UTP6Q9NYH9 597 aaKnown RBP15.42■□□□□ 0.06
PDLIM5-212ENST00000509333 IFT80Q9P2H3 777 aaPredicted RBP15.42■□□□□ 0.06
PDLIM5-212ENST00000509333 NOVA2Q9UNW9 492 aaKnown RBP15.42■□□□□ 0.06
PDLIM5-212ENST00000509333 KCNE1BA0A087WTH5 132 aa15.41■□□□□ 0.06
PDLIM5-212ENST00000509333 C9J4A7 227 aa15.41■□□□□ 0.06
PDLIM5-212ENST00000509333 KIF2AO00139 706 aaPredicted RBP15.41■□□□□ 0.06
PDLIM5-212ENST00000509333 CDC7O00311 574 aa15.41■□□□□ 0.06
PDLIM5-212ENST00000509333 EIF2S1P05198 315 aaKnown RBP15.41■□□□□ 0.06
PDLIM5-212ENST00000509333 ZNF37AP17032 561 aaPredicted RBP15.41■□□□□ 0.06
PDLIM5-212ENST00000509333 HRH2P25021 359 aa15.41■□□□□ 0.06
PDLIM5-212ENST00000509333 AP1S2P56377 157 aa15.41■□□□□ 0.06
PDLIM5-212ENST00000509333 POU4F1Q01851 419 aa15.41■□□□□ 0.06
PDLIM5-212ENST00000509333 ZNF460Q14592 562 aa15.41■□□□□ 0.06
PDLIM5-212ENST00000509333 C8orf74Q6P047 294 aa15.41■□□□□ 0.06
PDLIM5-212ENST00000509333 CCDC25Q86WR0 208 aa15.41■□□□□ 0.06
PDLIM5-212ENST00000509333 DTWD1Q8N5C7 304 aa15.41■□□□□ 0.06
PDLIM5-212ENST00000509333 TTC29Q8NA56 475 aaPredicted RBP15.41■□□□□ 0.06
PDLIM5-212ENST00000509333 OR56A3Q8NH54 315 aa15.41■□□□□ 0.06
PDLIM5-212ENST00000509333 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.41■□□□□ 0.06
PDLIM5-212ENST00000509333 CDKL2Q92772 493 aa15.41■□□□□ 0.06
PDLIM5-212ENST00000509333 PTERQ96BW5 349 aa15.41■□□□□ 0.06
PDLIM5-212ENST00000509333 FBXL8Q96CD0 374 aa15.41■□□□□ 0.06
PDLIM5-212ENST00000509333 CCDC177Q9NQR7 707 aaPredicted RBP15.41■□□□□ 0.06
PDLIM5-212ENST00000509333 ARL15Q9NXU5 204 aa15.41■□□□□ 0.06
PDLIM5-212ENST00000509333 NDOR1Q9UHB4 597 aa15.41■□□□□ 0.06
PDLIM5-212ENST00000509333 GPN3Q9UHW5 284 aaPredicted RBP15.41■□□□□ 0.06
PDLIM5-212ENST00000509333 TLK1Q9UKI8 766 aa15.41■□□□□ 0.06
PDLIM5-212ENST00000509333 A0A1B0GX78 115 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms