RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 PRSS58Q8IYP2 241 aa14.15□□□□□ -0.14
UBE2D3-228ENST00000508974 C17orf53Q8N3J3 647 aaPredicted RBP14.15□□□□□ -0.14
UBE2D3-228ENST00000508974 GPATCH11Q8N954 259 aa14.15□□□□□ -0.14
UBE2D3-228ENST00000508974 COL26A1Q96A83 441 aa14.15□□□□□ -0.14
UBE2D3-228ENST00000508974 ALKBH8Q96BT7 664 aaKnown RBP14.15□□□□□ -0.14
UBE2D3-228ENST00000508974 PTERQ96BW5 349 aa14.15□□□□□ -0.14
UBE2D3-228ENST00000508974 CABS1Q96KC9 395 aa14.15□□□□□ -0.14
UBE2D3-228ENST00000508974 ZNF285Q96NJ3 590 aa14.15□□□□□ -0.14
UBE2D3-228ENST00000508974 KRT12Q99456 494 aa14.15□□□□□ -0.14
UBE2D3-228ENST00000508974 PLCD4Q9BRC7 762 aa14.15□□□□□ -0.14
UBE2D3-228ENST00000508974 WDR83Q9BRX9 315 aaKnown RBP14.15□□□□□ -0.14
UBE2D3-228ENST00000508974 PLAC1Q9HBJ0 212 aa14.15□□□□□ -0.14
UBE2D3-228ENST00000508974 CUEDC1Q9NWM3 386 aaPredicted RBP14.15□□□□□ -0.14
UBE2D3-228ENST00000508974 P4HTMQ9NXG6 502 aa14.15□□□□□ -0.14
UBE2D3-228ENST00000508974 GPR83Q9NYM4 423 aa14.15□□□□□ -0.14
UBE2D3-228ENST00000508974 CDC23Q9UJX2 597 aa14.15□□□□□ -0.14
UBE2D3-228ENST00000508974 G3BP2Q9UN86 482 aaKnown RBP14.15□□□□□ -0.14
UBE2D3-228ENST00000508974 FITM1A5D6W6 292 aa14.14□□□□□ -0.15
UBE2D3-228ENST00000508974 ZNF839A8K0R7 811 aa14.14□□□□□ -0.15
UBE2D3-228ENST00000508974 H0YGG7 62 aa14.14□□□□□ -0.15
UBE2D3-228ENST00000508974 GFYI3L273 518 aa14.14□□□□□ -0.15
UBE2D3-228ENST00000508974 FFAR3O14843 346 aa14.14□□□□□ -0.15
UBE2D3-228ENST00000508974 GPR42O15529 346 aa14.14□□□□□ -0.15
UBE2D3-228ENST00000508974 SRPX2O60687 465 aaPredicted RBP14.14□□□□□ -0.15
UBE2D3-228ENST00000508974 CD63P08962 238 aa14.14□□□□□ -0.15
UBE2D3-228ENST00000508974 PIM1P11309 404 aaPredicted RBP14.14□□□□□ -0.15
UBE2D3-228ENST00000508974 IMPA1P29218 277 aa14.14□□□□□ -0.15
UBE2D3-228ENST00000508974 ARF3P61204 181 aaPredicted RBP14.14□□□□□ -0.15
UBE2D3-228ENST00000508974 FOXK1P85037 733 aa14.14□□□□□ -0.15
UBE2D3-228ENST00000508974 PRDX1Q06830 199 aaKnown RBP14.14□□□□□ -0.15
UBE2D3-228ENST00000508974 ARHGAP19Q14CB8 494 aa14.14□□□□□ -0.15
UBE2D3-228ENST00000508974 NKG7Q16617 165 aa14.14□□□□□ -0.15
UBE2D3-228ENST00000508974 HIF1AQ16665 826 aa14.14□□□□□ -0.15
UBE2D3-228ENST00000508974 HKDC1Q2TB90 917 aa14.14□□□□□ -0.15
UBE2D3-228ENST00000508974 FAM214AQ32MH5 1076 aa14.14□□□□□ -0.15
UBE2D3-228ENST00000508974 UGT3A1Q6NUS8 523 aa14.14□□□□□ -0.15
UBE2D3-228ENST00000508974 HIBCHQ6NVY1 386 aaPredicted RBP14.14□□□□□ -0.15
UBE2D3-228ENST00000508974 PAQR3Q6TCH7 311 aa14.14□□□□□ -0.15
UBE2D3-228ENST00000508974 SYDE1Q6ZW31 735 aaPredicted RBP14.14□□□□□ -0.15
UBE2D3-228ENST00000508974 PAQR7Q86WK9 346 aa14.14□□□□□ -0.15
UBE2D3-228ENST00000508974 CLEC1AQ8NC01 280 aa14.14□□□□□ -0.15
UBE2D3-228ENST00000508974 FBXO15Q8NCQ5 510 aaPredicted RBP14.14□□□□□ -0.15
UBE2D3-228ENST00000508974 GABPB2Q8TAK5 448 aaPredicted RBP14.14□□□□□ -0.15
UBE2D3-228ENST00000508974 FKBP10Q96AY3 582 aa14.14□□□□□ -0.15
UBE2D3-228ENST00000508974 LINGO1Q96FE5 620 aa14.14□□□□□ -0.15
UBE2D3-228ENST00000508974 SNF8Q96H20 258 aa14.14□□□□□ -0.15
UBE2D3-228ENST00000508974 C10orf90Q96M02 699 aa14.14□□□□□ -0.15
UBE2D3-228ENST00000508974 RUNDC3BQ96NL0 473 aa14.14□□□□□ -0.15
UBE2D3-228ENST00000508974 NAT9Q9BTE0 207 aa14.14□□□□□ -0.15
UBE2D3-228ENST00000508974 YIPF2Q9BWQ6 316 aa14.14□□□□□ -0.15
UBE2D3-228ENST00000508974 ZNF304Q9HCX3 659 aa14.14□□□□□ -0.15
UBE2D3-228ENST00000508974 TAS2R13Q9NYV9 303 aa14.14□□□□□ -0.15
UBE2D3-228ENST00000508974 KLHL42Q9P2K6 505 aa14.14□□□□□ -0.15
UBE2D3-228ENST00000508974 KLK4Q9Y5K2 254 aa14.14□□□□□ -0.15
UBE2D3-228ENST00000508974 ASH1LQ9NR48 2969 aaKnown RBP14.14□□□□□ -0.15
UBE2D3-228ENST00000508974 TTLL8A6PVC2 850 aa14.13□□□□□ -0.15
UBE2D3-228ENST00000508974 EFCAB8A8MWE9 144 aa14.13□□□□□ -0.15
UBE2D3-228ENST00000508974 CCDC188H7C350 402 aa14.13□□□□□ -0.15
UBE2D3-228ENST00000508974 HAT1O14929 419 aa14.13□□□□□ -0.15
UBE2D3-228ENST00000508974 CEACAM4O75871 244 aa14.13□□□□□ -0.15
UBE2D3-228ENST00000508974 SEC31AO94979 1220 aaKnown RBP14.13□□□□□ -0.15
UBE2D3-228ENST00000508974 CCNDBP1O95273 360 aa14.13□□□□□ -0.15
UBE2D3-228ENST00000508974 HSD17B2P37059 387 aa14.13□□□□□ -0.15
UBE2D3-228ENST00000508974 SKIV2L2P42285 1042 aaKnown RBP14.13□□□□□ -0.15
UBE2D3-228ENST00000508974 RGS4P49798 205 aa14.13□□□□□ -0.15
UBE2D3-228ENST00000508974 ARL4CP56559 192 aa14.13□□□□□ -0.15
UBE2D3-228ENST00000508974 TBPL1P62380 186 aa14.13□□□□□ -0.15
UBE2D3-228ENST00000508974 NAA25Q14CX7 972 aa14.13□□□□□ -0.15
UBE2D3-228ENST00000508974 FASTKD3Q14CZ7 662 aaKnown RBP14.13□□□□□ -0.15
UBE2D3-228ENST00000508974 DCAF10Q5QP82 559 aa14.13□□□□□ -0.15
UBE2D3-228ENST00000508974 TEDDM1Q5T9Z0 273 aa14.13□□□□□ -0.15
UBE2D3-228ENST00000508974 YOD1Q5VVQ6 348 aaPredicted RBP14.13□□□□□ -0.15
UBE2D3-228ENST00000508974 CAPN12Q6ZSI9 719 aa14.13□□□□□ -0.15
UBE2D3-228ENST00000508974 PALM2Q8IXS6 379 aa14.13□□□□□ -0.15
UBE2D3-228ENST00000508974 MYO1HQ8N1T3 1032 aa14.13□□□□□ -0.15
UBE2D3-228ENST00000508974 CSNK1A1LQ8N752 337 aa14.13□□□□□ -0.15
UBE2D3-228ENST00000508974 FER1L6-AS2Q96M78 137 aa14.13□□□□□ -0.15
UBE2D3-228ENST00000508974 SPSB2Q99619 263 aa14.13□□□□□ -0.15
UBE2D3-228ENST00000508974 MESP1Q9BRJ9 268 aa14.13□□□□□ -0.15
UBE2D3-228ENST00000508974 ATG10Q9H0Y0 220 aa14.13□□□□□ -0.15
UBE2D3-228ENST00000508974 MLXIPLQ9NP71 852 aa14.13□□□□□ -0.15
UBE2D3-228ENST00000508974 CCDC177Q9NQR7 707 aaPredicted RBP14.13□□□□□ -0.15
UBE2D3-228ENST00000508974 PDE10AQ9Y233 779 aa14.13□□□□□ -0.15
UBE2D3-228ENST00000508974 RUVBL1Q9Y265 456 aaKnown RBP14.13□□□□□ -0.15
UBE2D3-228ENST00000508974 SNX24Q9Y343 169 aa14.13□□□□□ -0.15
UBE2D3-228ENST00000508974 ZNF451Q9Y4E5 1061 aa14.13□□□□□ -0.15
UBE2D3-228ENST00000508974 TEX264Q9Y6I9 313 aa14.13□□□□□ -0.15
UBE2D3-228ENST00000508974 RELNP78509 3460 aa14.13□□□□□ -0.15
UBE2D3-228ENST00000508974 FLNCQ14315 2725 aa14.13□□□□□ -0.15
UBE2D3-228ENST00000508974 H7BY64 318 aa14.12□□□□□ -0.15
UBE2D3-228ENST00000508974 SAT1P21673 171 aa14.12□□□□□ -0.15
UBE2D3-228ENST00000508974 FBLP22087 321 aaKnown RBP14.12□□□□□ -0.15
UBE2D3-228ENST00000508974 RPL21P46778 160 aaKnown RBP14.12□□□□□ -0.15
UBE2D3-228ENST00000508974 PDIA2Q13087 525 aaKnown RBP14.12□□□□□ -0.15
UBE2D3-228ENST00000508974 RBBP7Q16576 425 aa14.12□□□□□ -0.15
UBE2D3-228ENST00000508974 PHKG1Q16816 387 aa14.12□□□□□ -0.15
UBE2D3-228ENST00000508974 MUM1Q2TAK8 710 aa14.12□□□□□ -0.15
UBE2D3-228ENST00000508974 HECTD2Q5U5R9 776 aa14.12□□□□□ -0.15
UBE2D3-228ENST00000508974 PRAMEF13Q5VWM6 474 aa14.12□□□□□ -0.15
UBE2D3-228ENST00000508974 ZNF425Q6IV72 752 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms