RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 C18orf21Q32NC0 220 aaPredicted RBP17.39■□□□□ 0.37
CLDND1-220ENST00000508902 GLE1Q53GS7 698 aaKnown RBP17.39■□□□□ 0.37
CLDND1-220ENST00000508902 COX15Q7KZN9 410 aa17.39■□□□□ 0.37
CLDND1-220ENST00000508902 CTAGE3PQ8IX95 158 aa17.39■□□□□ 0.37
CLDND1-220ENST00000508902 SHISA5Q8N114 240 aa17.39■□□□□ 0.37
CLDND1-220ENST00000508902 ENDOVQ8N8Q3 282 aaKnown RBP17.39■□□□□ 0.37
CLDND1-220ENST00000508902 OR56A3Q8NH54 315 aa17.39■□□□□ 0.37
CLDND1-220ENST00000508902 MCOLN3Q8TDD5 553 aa17.39■□□□□ 0.37
CLDND1-220ENST00000508902 IFT81Q8WYA0 676 aa17.39■□□□□ 0.37
CLDND1-220ENST00000508902 KIAA1143Q96AT1 154 aaPredicted RBP17.39■□□□□ 0.37
CLDND1-220ENST00000508902 PYCR2Q96C36 320 aa17.39■□□□□ 0.37
CLDND1-220ENST00000508902 C10orf90Q96M02 699 aa17.39■□□□□ 0.37
CLDND1-220ENST00000508902 CCDC138Q96M89 665 aa17.39■□□□□ 0.37
CLDND1-220ENST00000508902 L2HGDHQ9H9P8 463 aa17.39■□□□□ 0.37
CLDND1-220ENST00000508902 POPDC3Q9HBV1 291 aa17.39■□□□□ 0.37
CLDND1-220ENST00000508902 INTS7Q9NVH2 962 aaKnown RBP17.39■□□□□ 0.37
CLDND1-220ENST00000508902 UTP6Q9NYH9 597 aaKnown RBP17.39■□□□□ 0.37
CLDND1-220ENST00000508902 H0YGG7 62 aa17.38■□□□□ 0.37
CLDND1-220ENST00000508902 GUCA1CO95843 209 aa17.38■□□□□ 0.37
CLDND1-220ENST00000508902 CCNYL3P0C7X3 344 aa17.38■□□□□ 0.37
CLDND1-220ENST00000508902 PTPN4P29074 926 aa17.38■□□□□ 0.37
CLDND1-220ENST00000508902 STX2P32856 288 aa17.38■□□□□ 0.37
CLDND1-220ENST00000508902 ARF3P61204 181 aaPredicted RBP17.38■□□□□ 0.37
CLDND1-220ENST00000508902 POU4F1Q01851 419 aa17.38■□□□□ 0.37
CLDND1-220ENST00000508902 BMPR2Q13873 1038 aa17.38■□□□□ 0.37
CLDND1-220ENST00000508902 SLC9A5Q14940 896 aa17.38■□□□□ 0.37
CLDND1-220ENST00000508902 PRTGQ2VWP7 1150 aa17.38■□□□□ 0.37
CLDND1-220ENST00000508902 PRAMEF13Q5VWM6 474 aa17.38■□□□□ 0.37
CLDND1-220ENST00000508902 C16orf46Q6P387 395 aa17.38■□□□□ 0.37
CLDND1-220ENST00000508902 CEP112Q8N8E3 955 aa17.38■□□□□ 0.37
CLDND1-220ENST00000508902 CDKL2Q92772 493 aa17.38■□□□□ 0.37
CLDND1-220ENST00000508902 PTERQ96BW5 349 aa17.38■□□□□ 0.37
CLDND1-220ENST00000508902 FBXL8Q96CD0 374 aa17.38■□□□□ 0.37
CLDND1-220ENST00000508902 OR2A5Q96R48 311 aa17.38■□□□□ 0.37
CLDND1-220ENST00000508902 FMO2Q99518 471 aa17.38■□□□□ 0.37
CLDND1-220ENST00000508902 SELENOSQ9BQE4 189 aa17.38■□□□□ 0.37
CLDND1-220ENST00000508902 SPNS1Q9H2V7 528 aa17.38■□□□□ 0.37
CLDND1-220ENST00000508902 CCDC177Q9NQR7 707 aaPredicted RBP17.38■□□□□ 0.37
CLDND1-220ENST00000508902 NUP210LQ5VU65 1888 aa17.37■□□□□ 0.37
CLDND1-220ENST00000508902 FASNP49327 2511 aaKnown RBP17.37■□□□□ 0.37
CLDND1-220ENST00000508902 H7BY64 318 aa17.37■□□□□ 0.37
CLDND1-220ENST00000508902 CREG1O75629 220 aa17.37■□□□□ 0.37
CLDND1-220ENST00000508902 STATHP02808 62 aa17.37■□□□□ 0.37
CLDND1-220ENST00000508902 FAM87AP0C7U9 286 aa17.37■□□□□ 0.37
CLDND1-220ENST00000508902 SLC35E2BP0CK96 405 aa17.37■□□□□ 0.37
CLDND1-220ENST00000508902 ATXN8OSP0DMR3 200 aa17.37■□□□□ 0.37
CLDND1-220ENST00000508902 CSNK1G2P78368 415 aa17.37■□□□□ 0.37
CLDND1-220ENST00000508902 ERV3-1Q14264 604 aa17.37■□□□□ 0.37
CLDND1-220ENST00000508902 USP10Q14694 798 aaKnown RBP17.37■□□□□ 0.37
CLDND1-220ENST00000508902 NCF4Q15080 339 aa17.37■□□□□ 0.37
CLDND1-220ENST00000508902 OR4D1Q15615 310 aa17.37■□□□□ 0.37
CLDND1-220ENST00000508902 CRTC2Q53ET0 693 aaPredicted RBP17.37■□□□□ 0.37
CLDND1-220ENST00000508902 WASHC2DQ5SRD0 308 aa17.37■□□□□ 0.37
CLDND1-220ENST00000508902 GRTP1Q5TC63 336 aa17.37■□□□□ 0.37
CLDND1-220ENST00000508902 TLDC1Q6P9B6 456 aa17.37■□□□□ 0.37
CLDND1-220ENST00000508902 VN1R4Q7Z5H5 301 aa17.37■□□□□ 0.37
CLDND1-220ENST00000508902 GSPT2Q8IYD1 628 aaKnown RBP17.37■□□□□ 0.37
CLDND1-220ENST00000508902 GPR135Q8IZ08 494 aa17.37■□□□□ 0.37
CLDND1-220ENST00000508902 NKAPQ8N5F7 415 aaKnown RBP17.37■□□□□ 0.37
CLDND1-220ENST00000508902 ADAMTS17Q8TE56 1095 aa17.37■□□□□ 0.37
CLDND1-220ENST00000508902 MED8Q96G25 268 aa17.37■□□□□ 0.37
CLDND1-220ENST00000508902 UBXN10Q96LJ8 280 aa17.37■□□□□ 0.37
CLDND1-220ENST00000508902 PRAP1Q96NZ9 151 aa17.37■□□□□ 0.37
CLDND1-220ENST00000508902 ZFYVE21Q9BQ24 234 aa17.37■□□□□ 0.37
CLDND1-220ENST00000508902 ACSS3Q9H6R3 686 aa17.37■□□□□ 0.37
CLDND1-220ENST00000508902 GPAMQ9HCL2 828 aa17.37■□□□□ 0.37
CLDND1-220ENST00000508902 ARL15Q9NXU5 204 aa17.37■□□□□ 0.37
CLDND1-220ENST00000508902 ANKMY1Q9P2S6 941 aa17.37■□□□□ 0.37
CLDND1-220ENST00000508902 NFU1Q9UMS0 254 aa17.37■□□□□ 0.37
CLDND1-220ENST00000508902 NOVA2Q9UNW9 492 aaKnown RBP17.37■□□□□ 0.37
CLDND1-220ENST00000508902 FARSAQ9Y285 508 aaKnown RBP17.37■□□□□ 0.37
CLDND1-220ENST00000508902 MRPS2Q9Y399 296 aaKnown RBP17.37■□□□□ 0.37
CLDND1-220ENST00000508902 AP1M2Q9Y6Q5 423 aa17.37■□□□□ 0.37
CLDND1-220ENST00000508902 ZNF839A8K0R7 811 aa17.36■□□□□ 0.37
CLDND1-220ENST00000508902 MAP3K7O43318 606 aa17.36■□□□□ 0.37
CLDND1-220ENST00000508902 KLF7O75840 302 aaPredicted RBP17.36■□□□□ 0.37
CLDND1-220ENST00000508902 ACSL3O95573 720 aa17.36■□□□□ 0.37
CLDND1-220ENST00000508902 ITGB2P05107 769 aa17.36■□□□□ 0.37
CLDND1-220ENST00000508902 FAM153BP0C7A2 387 aa17.36■□□□□ 0.37
CLDND1-220ENST00000508902 RHOXF2BP0C7M4 288 aa17.36■□□□□ 0.37
CLDND1-220ENST00000508902 MYBL2P10244 700 aa17.36■□□□□ 0.37
CLDND1-220ENST00000508902 CD1DP15813 335 aa17.36■□□□□ 0.37
CLDND1-220ENST00000508902 NPPBP16860 134 aa17.36■□□□□ 0.37
CLDND1-220ENST00000508902 KCNC1P48547 511 aa17.36■□□□□ 0.37
CLDND1-220ENST00000508902 AP1S2P56377 157 aa17.36■□□□□ 0.37
CLDND1-220ENST00000508902 HKDC1Q2TB90 917 aa17.36■□□□□ 0.37
CLDND1-220ENST00000508902 FAM153CQ494X1 144 aa17.36■□□□□ 0.37
CLDND1-220ENST00000508902 ZC3H12BQ5HYM0 836 aaKnown RBP17.36■□□□□ 0.37
CLDND1-220ENST00000508902 METTL27Q8N6F8 245 aaPredicted RBP17.36■□□□□ 0.37
CLDND1-220ENST00000508902 SLC39A7Q92504 469 aa17.36■□□□□ 0.37
CLDND1-220ENST00000508902 N4BP2L2Q92802 583 aaPredicted RBP17.36■□□□□ 0.37
CLDND1-220ENST00000508902 MRRFQ96E11 262 aaKnown RBP17.36■□□□□ 0.37
CLDND1-220ENST00000508902 RHOXF2Q9BQY4 288 aa17.36■□□□□ 0.37
CLDND1-220ENST00000508902 EFHD1Q9BUP0 239 aa17.36■□□□□ 0.37
CLDND1-220ENST00000508902 TXLNGYQ9BZA5 131 aa17.36■□□□□ 0.37
CLDND1-220ENST00000508902 FAM129AQ9BZQ8 928 aa17.36■□□□□ 0.37
CLDND1-220ENST00000508902 DERL2Q9GZP9 239 aa17.36■□□□□ 0.37
CLDND1-220ENST00000508902 EPB41L4BQ9H329 900 aa17.36■□□□□ 0.37
CLDND1-220ENST00000508902 CUTCQ9NTM9 273 aa17.36■□□□□ 0.37
CLDND1-220ENST00000508902 OARD1Q9Y530 152 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms