RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 RPS15AP62244 130 aaKnown RBP8.78□□□□□ -1
NUP54-207ENST00000508583 GRM7Q14831 915 aa8.78□□□□□ -1
NUP54-207ENST00000508583 GPR19Q15760 415 aa8.78□□□□□ -1
NUP54-207ENST00000508583 FAM214AQ32MH5 1076 aa8.78□□□□□ -1
NUP54-207ENST00000508583 KIAA1614Q5VZ46 1190 aa8.78□□□□□ -1
NUP54-207ENST00000508583 METTL2BQ6P1Q9 378 aaKnown RBP8.78□□□□□ -1
NUP54-207ENST00000508583 C6orf15Q6UXA7 325 aaPredicted RBP8.78□□□□□ -1
NUP54-207ENST00000508583 CDHR3Q6ZTQ4 885 aa8.78□□□□□ -1
NUP54-207ENST00000508583 ISCA2Q86U28 154 aa8.78□□□□□ -1
NUP54-207ENST00000508583 MCATQ8IVS2 390 aaKnown RBP8.78□□□□□ -1
NUP54-207ENST00000508583 NLGN4XQ8N0W4 816 aa8.78□□□□□ -1
NUP54-207ENST00000508583 IL22RA1Q8N6P7 574 aa8.78□□□□□ -1
NUP54-207ENST00000508583 TTC29Q8NA56 475 aaPredicted RBP8.78□□□□□ -1
NUP54-207ENST00000508583 PPFIBP2Q8ND30 876 aa8.78□□□□□ -1
NUP54-207ENST00000508583 NLGN4YQ8NFZ3 816 aaPredicted RBP8.78□□□□□ -1
NUP54-207ENST00000508583 PROKR1Q8TCW9 393 aa8.78□□□□□ -1
NUP54-207ENST00000508583 ALKBH8Q96BT7 664 aaKnown RBP8.78□□□□□ -1
NUP54-207ENST00000508583 RHBDF1Q96CC6 855 aa8.78□□□□□ -1
NUP54-207ENST00000508583 ZNF501Q96CX3 271 aaPredicted RBP8.78□□□□□ -1
NUP54-207ENST00000508583 PPM1MQ96MI6 270 aa8.78□□□□□ -1
NUP54-207ENST00000508583 LRFN5Q96NI6 719 aa8.78□□□□□ -1
NUP54-207ENST00000508583 CTRCQ99895 268 aa8.78□□□□□ -1
NUP54-207ENST00000508583 NDC1Q9BTX1 674 aa8.78□□□□□ -1
NUP54-207ENST00000508583 ROPN1BQ9BZX4 212 aaPredicted RBP8.78□□□□□ -1
NUP54-207ENST00000508583 ATG10Q9H0Y0 220 aa8.78□□□□□ -1
NUP54-207ENST00000508583 EPB41L4BQ9H329 900 aa8.78□□□□□ -1
NUP54-207ENST00000508583 ALG9Q9H6U8 611 aa8.78□□□□□ -1
NUP54-207ENST00000508583 ROPN1Q9HAT0 212 aaPredicted RBP8.78□□□□□ -1
NUP54-207ENST00000508583 IGSF5Q9NSI5 407 aa8.78□□□□□ -1
NUP54-207ENST00000508583 ABCF3Q9NUQ8 709 aa8.78□□□□□ -1
NUP54-207ENST00000508583 EURLQ9NYK6 297 aa8.78□□□□□ -1
NUP54-207ENST00000508583 GPRC5BQ9NZH0 403 aa8.78□□□□□ -1
NUP54-207ENST00000508583 FOXJ2Q9P0K8 574 aa8.78□□□□□ -1
NUP54-207ENST00000508583 TMEM184BQ9Y519 407 aaPredicted RBP8.78□□□□□ -1
NUP54-207ENST00000508583 TNPO3Q9Y5L0 923 aaKnown RBP8.78□□□□□ -1
NUP54-207ENST00000508583 SNRNP200O75643 2136 aaKnown RBP8.78□□□□□ -1
NUP54-207ENST00000508583 ADAMTS20P59510 1910 aa8.78□□□□□ -1
NUP54-207ENST00000508583 OR2A25A4D2G3 310 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 CCDC151A5D8V7 595 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 KRT87PA6NCN2 255 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 SMIM24O75264 130 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 H2AFYO75367 372 aaKnown RBP8.77□□□□□ -1.01
NUP54-207ENST00000508583 STK16O75716 305 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 KIAA0754O94854 1291 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 WDR47O94967 919 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 CAPNS1P04632 268 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 CD63P08962 238 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 PIM1P11309 404 aaPredicted RBP8.77□□□□□ -1.01
NUP54-207ENST00000508583 GFAPP14136 432 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 GNAZP19086 355 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 TAC1P20366 129 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 AGXTP21549 392 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 PSMB5P28074 263 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 GSTM2P28161 218 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 HPDP32754 393 aaPredicted RBP8.77□□□□□ -1.01
NUP54-207ENST00000508583 GGT5P36269 586 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 EIF2S3P41091 472 aaKnown RBP8.77□□□□□ -1.01
NUP54-207ENST00000508583 CSRP3P50461 194 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 CCR8P51685 355 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 PGGT1BP53609 377 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 EMP3P54852 163 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 ALDH18A1P54886 795 aaKnown RBP8.77□□□□□ -1.01
NUP54-207ENST00000508583 ABHD18Q0P651 414 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 OR4D1Q15615 310 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 PTCHD3Q3KNS1 767 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 UBAP2Q5T6F2 1119 aaKnown RBP8.77□□□□□ -1.01
NUP54-207ENST00000508583 ZNF425Q6IV72 752 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 MBOAT1Q6ZNC8 495 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 RNF44Q7L0R7 432 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 LRRC70Q7Z2Q7 622 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 PAQR7Q86WK9 346 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 KLHDC8AQ8IYD2 350 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 LRRC56Q8IYG6 542 aaPredicted RBP8.77□□□□□ -1.01
NUP54-207ENST00000508583 CACNA2D3Q8IZS8 1091 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 CENPLQ8N0S6 344 aaPredicted RBP8.77□□□□□ -1.01
NUP54-207ENST00000508583 SPATA6LQ8N4H0 392 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 DNAJC22Q8N4W6 341 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 ZSCAN1Q8NBB4 408 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 ABHD11Q8NFV4 315 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 TTLQ8NG68 377 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 KCTD4Q8WVF5 259 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 SLC5A11Q8WWX8 675 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 EXT2Q93063 718 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 PTERQ96BW5 349 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 NXNL1Q96CM4 212 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 CLIP3Q96DZ5 547 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 SCYL1Q96KG9 808 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 HS3ST6Q96QI5 342 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 NRTNQ99748 197 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 MRPL57Q9BQC6 102 aaKnown RBP8.77□□□□□ -1.01
NUP54-207ENST00000508583 AIF1LQ9BQI0 150 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 PITHD1Q9GZP4 211 aaPredicted RBP8.77□□□□□ -1.01
NUP54-207ENST00000508583 KLHL25Q9H0H3 589 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 ACTR5Q9H9F9 607 aaPredicted RBP8.77□□□□□ -1.01
NUP54-207ENST00000508583 APMAPQ9HDC9 416 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 ENAMQ9NRM1 1142 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 TXLNGQ9NUQ3 528 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 DNAJC11Q9NVH1 559 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 TBK1Q9UHD2 729 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 DCDC2Q9UHG0 476 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms