RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 SCN1BQ07699 218 aa10.53□□□□□ -0.72
PDLIM5-210ENST00000508216 ZNF155Q12901 538 aaPredicted RBP10.53□□□□□ -0.72
PDLIM5-210ENST00000508216 KLF1Q13351 362 aaPredicted RBP10.53□□□□□ -0.72
PDLIM5-210ENST00000508216 QPRTQ15274 297 aa10.53□□□□□ -0.72
PDLIM5-210ENST00000508216 KRTCAP3Q53RY4 240 aa10.53□□□□□ -0.72
PDLIM5-210ENST00000508216 MBLAC2Q68D91 279 aa10.53□□□□□ -0.72
PDLIM5-210ENST00000508216 ESRP1Q6NXG1 681 aaKnown RBP10.53□□□□□ -0.72
PDLIM5-210ENST00000508216 ANKRD54Q6NXT1 300 aa10.53□□□□□ -0.72
PDLIM5-210ENST00000508216 PTAR1Q7Z6K3 402 aaPredicted RBP10.53□□□□□ -0.72
PDLIM5-210ENST00000508216 RAB44Q7Z6P3 723 aaPredicted RBP10.53□□□□□ -0.72
PDLIM5-210ENST00000508216 ISCA2Q86U28 154 aa10.53□□□□□ -0.72
PDLIM5-210ENST00000508216 LRRTM4Q86VH4 590 aa10.53□□□□□ -0.72
PDLIM5-210ENST00000508216 DENND6AQ8IWF6 608 aa10.53□□□□□ -0.72
PDLIM5-210ENST00000508216 OFCC1Q8IZS5 231 aa10.53□□□□□ -0.72
PDLIM5-210ENST00000508216 DUSP18Q8NEJ0 188 aa10.53□□□□□ -0.72
PDLIM5-210ENST00000508216 WDR77Q9BQA1 342 aaPredicted RBP10.53□□□□□ -0.72
PDLIM5-210ENST00000508216 SLC30A2Q9BRI3 323 aa10.53□□□□□ -0.72
PDLIM5-210ENST00000508216 SEMA4CQ9C0C4 833 aa10.53□□□□□ -0.72
PDLIM5-210ENST00000508216 C20orf27Q9GZN8 174 aa10.53□□□□□ -0.72
PDLIM5-210ENST00000508216 OR51B6Q9H340 312 aa10.53□□□□□ -0.72
PDLIM5-210ENST00000508216 MUC13Q9H3R2 512 aa10.53□□□□□ -0.72
PDLIM5-210ENST00000508216 RNF122Q9H9V4 155 aa10.53□□□□□ -0.72
PDLIM5-210ENST00000508216 C11orf16Q9NQ32 467 aa10.53□□□□□ -0.72
PDLIM5-210ENST00000508216 MED11Q9P086 117 aa10.53□□□□□ -0.72
PDLIM5-210ENST00000508216 ALG5Q9Y673 324 aa10.53□□□□□ -0.72
PDLIM5-210ENST00000508216 PIK3C2BO00750 1634 aa10.53□□□□□ -0.72
PDLIM5-210ENST00000508216 FAM205AQ6ZU69 1335 aa10.53□□□□□ -0.72
PDLIM5-210ENST00000508216 NCF1BA6NI72 391 aaPredicted RBP10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 NCF1CA8MVU1 366 aaPredicted RBP10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 I6L893 689 aaPredicted RBP10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 MEIS1O00470 390 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 EFSO43281 561 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 LIASO43766 372 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 SLC43A1O75387 559 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 S1PR4O95977 384 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 GCP02774 474 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 SERPINE1P05121 402 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 COMTP21964 271 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 TGM4P49221 684 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 ADPRHP54922 357 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 CXCR4P61073 352 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 TOMM34Q15785 309 aaPredicted RBP10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 SLC39A12Q504Y0 691 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 LGSNQ5TDP6 509 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 MLIPQ5VWP3 458 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 RAP1GAP2Q684P5 730 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 REP15Q6BDI9 236 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 PRR5LQ6MZQ0 368 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 SLC25A24Q6NUK1 477 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 KRT25Q7Z3Z0 450 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 TXNRD3Q86VQ6 643 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 GID4Q8IVV7 300 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 SLC35F3Q8IY50 421 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 SPATA6LQ8N4H0 392 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 ARRDC1Q8N5I2 433 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 ZNF321PQ8N8H1 164 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 POMGNT2Q8NAT1 580 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 ZNF431Q8TF32 576 aaPredicted RBP10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 ZNF384Q8TF68 577 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 CHURC1Q8WUH1 139 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 TCEAL4Q96EI5 215 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 MYO19Q96H55 970 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 MYRFLQ96LU7 910 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 PWWP2AQ96N64 755 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 COL21A1Q96P44 957 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 SH2D3AQ9BRG2 576 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 FEM1AQ9BSK4 669 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 APOL6Q9BWW8 343 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 DGCR6LQ9BY27 220 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 UGT2B28Q9BY64 529 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 NKX6-2Q9C056 277 aaPredicted RBP10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 MS4A7Q9GZW8 240 aaPredicted RBP10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 SPAG4Q9NPE6 437 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 ACP6Q9NPH0 428 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 CHST7Q9NS84 486 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 FAM86C1Q9NVL1 165 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 USE1Q9NZ43 259 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 GRHPRQ9UBQ7 328 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 INTS6Q9UL03 887 aaKnown RBP10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 SLC22A14Q9Y267 594 aa10.52□□□□□ -0.72
PDLIM5-210ENST00000508216 ARFGEF2Q9Y6D5 1785 aa10.52□□□□□ -0.73
PDLIM5-210ENST00000508216 EFCAB9A8MZ26 197 aa10.52□□□□□ -0.73
PDLIM5-210ENST00000508216 K7ERQ8 282 aa10.52□□□□□ -0.73
PDLIM5-210ENST00000508216 RECQL4O94761 1208 aa10.52□□□□□ -0.73
PDLIM5-210ENST00000508216 GADD45GO95257 159 aa10.52□□□□□ -0.73
PDLIM5-210ENST00000508216 CBX7O95931 251 aa10.52□□□□□ -0.73
PDLIM5-210ENST00000508216 RECKO95980 971 aa10.52□□□□□ -0.73
PDLIM5-210ENST00000508216 OTCP00480 354 aa10.52□□□□□ -0.73
PDLIM5-210ENST00000508216 FCER1AP12319 257 aa10.52□□□□□ -0.73
PDLIM5-210ENST00000508216 RAB3BP20337 219 aa10.52□□□□□ -0.73
PDLIM5-210ENST00000508216 IGFBP5P24593 272 aa10.52□□□□□ -0.73
PDLIM5-210ENST00000508216 GABRB2P47870 512 aa10.52□□□□□ -0.73
PDLIM5-210ENST00000508216 MAZP56270 477 aaKnown RBP10.52□□□□□ -0.73
PDLIM5-210ENST00000508216 SOX8P57073 446 aa10.52□□□□□ -0.73
PDLIM5-210ENST00000508216 NCS1P62166 190 aa10.52□□□□□ -0.73
PDLIM5-210ENST00000508216 SLC7A9P82251 487 aa10.52□□□□□ -0.73
PDLIM5-210ENST00000508216 EMX1Q04741 257 aaPredicted RBP10.52□□□□□ -0.73
PDLIM5-210ENST00000508216 MSS51Q4VC12 460 aa10.52□□□□□ -0.73
PDLIM5-210ENST00000508216 SLC35D3Q5M8T2 416 aa10.52□□□□□ -0.73
PDLIM5-210ENST00000508216 SAMD4BQ5PRF9 694 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms