RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 OR4K3Q96R72 315 aa17.08■□□□□ 0.32
SMN1-204ENST00000506163 ACSS3Q9H6R3 686 aa17.08■□□□□ 0.32
SMN1-204ENST00000506163 SLC22A11Q9NSA0 550 aa17.08■□□□□ 0.32
SMN1-204ENST00000506163 NOVA2Q9UNW9 492 aaKnown RBP17.08■□□□□ 0.32
SMN1-204ENST00000506163 PCDHGA6Q9Y5G7 932 aa17.08■□□□□ 0.32
SMN1-204ENST00000506163 AP1M2Q9Y6Q5 423 aa17.08■□□□□ 0.32
SMN1-204ENST00000506163 PIEZO2Q9H5I5 2752 aa17.07■□□□□ 0.32
SMN1-204ENST00000506163 FITM1A5D6W6 292 aa17.07■□□□□ 0.32
SMN1-204ENST00000506163 ZNF891A8MT65 544 aaPredicted RBP17.07■□□□□ 0.32
SMN1-204ENST00000506163 KATNA1O75449 491 aa17.07■□□□□ 0.32
SMN1-204ENST00000506163 KLK3P07288 261 aaPredicted RBP17.07■□□□□ 0.32
SMN1-204ENST00000506163 HIST1H2AGP0C0S8 130 aaPredicted RBP17.07■□□□□ 0.32
SMN1-204ENST00000506163 CCDC166P0CW27 439 aa17.07■□□□□ 0.32
SMN1-204ENST00000506163 NPPBP16860 134 aa17.07■□□□□ 0.32
SMN1-204ENST00000506163 STMN1P16949 149 aa17.07■□□□□ 0.32
SMN1-204ENST00000506163 HIST1H2ADP20671 130 aa17.07■□□□□ 0.32
SMN1-204ENST00000506163 KCNC1P48547 511 aa17.07■□□□□ 0.32
SMN1-204ENST00000506163 SLC12A2P55011 1212 aa17.07■□□□□ 0.32
SMN1-204ENST00000506163 AP1S2P56377 157 aa17.07■□□□□ 0.32
SMN1-204ENST00000506163 VSX2P58304 361 aaPredicted RBP17.07■□□□□ 0.32
SMN1-204ENST00000506163 NAB1Q13506 487 aa17.07■□□□□ 0.32
SMN1-204ENST00000506163 C18orf21Q32NC0 220 aaPredicted RBP17.07■□□□□ 0.32
SMN1-204ENST00000506163 WASHC2DQ5SRD0 308 aa17.07■□□□□ 0.32
SMN1-204ENST00000506163 TLDC1Q6P9B6 456 aa17.07■□□□□ 0.32
SMN1-204ENST00000506163 PLD3Q8IV08 490 aa17.07■□□□□ 0.32
SMN1-204ENST00000506163 IFT20Q8IY31 132 aa17.07■□□□□ 0.32
SMN1-204ENST00000506163 OR56A3Q8NH54 315 aa17.07■□□□□ 0.32
SMN1-204ENST00000506163 PTERQ96BW5 349 aa17.07■□□□□ 0.32
SMN1-204ENST00000506163 FBXL8Q96CD0 374 aa17.07■□□□□ 0.32
SMN1-204ENST00000506163 MED8Q96G25 268 aa17.07■□□□□ 0.32
SMN1-204ENST00000506163 HIST1H2AHQ96KK5 128 aa17.07■□□□□ 0.32
SMN1-204ENST00000506163 HIST1H2AJQ99878 128 aa17.07■□□□□ 0.32
SMN1-204ENST00000506163 SELENOSQ9BQE4 189 aa17.07■□□□□ 0.32
SMN1-204ENST00000506163 H2AFJQ9BTM1 129 aa17.07■□□□□ 0.32
SMN1-204ENST00000506163 DERL2Q9GZP9 239 aa17.07■□□□□ 0.32
SMN1-204ENST00000506163 CCDC177Q9NQR7 707 aaPredicted RBP17.07■□□□□ 0.32
SMN1-204ENST00000506163 H0YGG7 62 aa17.06■□□□□ 0.32
SMN1-204ENST00000506163 HAT1O14929 419 aa17.06■□□□□ 0.32
SMN1-204ENST00000506163 ENO2P09104 434 aaPredicted RBP17.06■□□□□ 0.32
SMN1-204ENST00000506163 SLC35E2BP0CK96 405 aa17.06■□□□□ 0.32
SMN1-204ENST00000506163 PRKAR1AP10644 381 aa17.06■□□□□ 0.32
SMN1-204ENST00000506163 CD1DP15813 335 aa17.06■□□□□ 0.32
SMN1-204ENST00000506163 RAB10P61026 200 aa17.06■□□□□ 0.32
SMN1-204ENST00000506163 ARF3P61204 181 aaPredicted RBP17.06■□□□□ 0.32
SMN1-204ENST00000506163 SNRPNP63162 240 aaKnown RBP17.06■□□□□ 0.32
SMN1-204ENST00000506163 ABATP80404 500 aa17.06■□□□□ 0.32
SMN1-204ENST00000506163 ILF2Q12905 390 aaKnown RBP17.06■□□□□ 0.32
SMN1-204ENST00000506163 BMPR2Q13873 1038 aa17.06■□□□□ 0.32
SMN1-204ENST00000506163 THEMIS2Q5TEJ8 643 aa17.06■□□□□ 0.32
SMN1-204ENST00000506163 PRAMEF13Q5VWM6 474 aa17.06■□□□□ 0.32
SMN1-204ENST00000506163 ZSCAN1Q8NBB4 408 aa17.06■□□□□ 0.32
SMN1-204ENST00000506163 UHMK1Q8TAS1 419 aaKnown RBP17.06■□□□□ 0.32
SMN1-204ENST00000506163 EXTL1Q92935 676 aa17.06■□□□□ 0.32
SMN1-204ENST00000506163 ALKBH8Q96BT7 664 aaKnown RBP17.06■□□□□ 0.32
SMN1-204ENST00000506163 TSPAN17Q96FV3 270 aa17.06■□□□□ 0.32
SMN1-204ENST00000506163 OR2A5Q96R48 311 aa17.06■□□□□ 0.32
SMN1-204ENST00000506163 CYTH2Q99418 400 aa17.06■□□□□ 0.32
SMN1-204ENST00000506163 EFHD1Q9BUP0 239 aa17.06■□□□□ 0.32
SMN1-204ENST00000506163 TSPYL1Q9H0U9 437 aa17.06■□□□□ 0.32
SMN1-204ENST00000506163 ACTL8Q9H568 366 aa17.06■□□□□ 0.32
SMN1-204ENST00000506163 CTNNAL1Q9UBT7 734 aa17.06■□□□□ 0.32
SMN1-204ENST00000506163 FARSAQ9Y285 508 aaKnown RBP17.06■□□□□ 0.32
SMN1-204ENST00000506163 C21orf140B9A014 251 aa17.05■□□□□ 0.32
SMN1-204ENST00000506163 SRPX2O60687 465 aaPredicted RBP17.05■□□□□ 0.32
SMN1-204ENST00000506163 CNOT3O75175 753 aaKnown RBP17.05■□□□□ 0.32
SMN1-204ENST00000506163 CREG1O75629 220 aa17.05■□□□□ 0.32
SMN1-204ENST00000506163 ATXN8OSP0DMR3 200 aa17.05■□□□□ 0.32
SMN1-204ENST00000506163 MYBL2P10244 700 aa17.05■□□□□ 0.32
SMN1-204ENST00000506163 PTPN4P29074 926 aa17.05■□□□□ 0.32
SMN1-204ENST00000506163 FOXL2P58012 376 aa17.05■□□□□ 0.32
SMN1-204ENST00000506163 RHDQ02161 417 aa17.05■□□□□ 0.32
SMN1-204ENST00000506163 ERV3-1Q14264 604 aa17.05■□□□□ 0.32
SMN1-204ENST00000506163 OR4D1Q15615 310 aa17.05■□□□□ 0.32
SMN1-204ENST00000506163 TBR1Q16650 682 aa17.05■□□□□ 0.32
SMN1-204ENST00000506163 PRTGQ2VWP7 1150 aa17.05■□□□□ 0.32
SMN1-204ENST00000506163 MROH9Q5TGP6 573 aa17.05■□□□□ 0.32
SMN1-204ENST00000506163 C16orf46Q6P387 395 aa17.05■□□□□ 0.32
SMN1-204ENST00000506163 CEP128Q6ZU80 1094 aa17.05■□□□□ 0.32
SMN1-204ENST00000506163 GSPT2Q8IYD1 628 aaKnown RBP17.05■□□□□ 0.32
SMN1-204ENST00000506163 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.05■□□□□ 0.32
SMN1-204ENST00000506163 ZFYVE21Q9BQ24 234 aa17.05■□□□□ 0.32
SMN1-204ENST00000506163 TRIM54Q9BYV2 358 aa17.05■□□□□ 0.32
SMN1-204ENST00000506163 TXLNGYQ9BZA5 131 aa17.05■□□□□ 0.32
SMN1-204ENST00000506163 SLC7A5P2Q9GIP4 190 aa17.05■□□□□ 0.32
SMN1-204ENST00000506163 IRAK4Q9NWZ3 460 aa17.05■□□□□ 0.32
SMN1-204ENST00000506163 ANKMY1Q9P2S6 941 aa17.05■□□□□ 0.32
SMN1-204ENST00000506163 SNX7Q9UNH6 387 aa17.05■□□□□ 0.32
SMN1-204ENST00000506163 OARD1Q9Y530 152 aa17.05■□□□□ 0.32
SMN1-204ENST00000506163 ZNF500O60304 480 aaPredicted RBP17.04■□□□□ 0.32
SMN1-204ENST00000506163 CCNDBP1O95273 360 aa17.04■□□□□ 0.32
SMN1-204ENST00000506163 EIF2S1P05198 315 aaKnown RBP17.04■□□□□ 0.32
SMN1-204ENST00000506163 HBQ1P09105 142 aa17.04■□□□□ 0.32
SMN1-204ENST00000506163 PHBP35232 272 aa17.04■□□□□ 0.32
SMN1-204ENST00000506163 CSNK1G2P78368 415 aa17.04■□□□□ 0.32
SMN1-204ENST00000506163 CDC20Q12834 499 aa17.04■□□□□ 0.32
SMN1-204ENST00000506163 IL10RAQ13651 578 aa17.04■□□□□ 0.32
SMN1-204ENST00000506163 CSHL1Q14406 222 aa17.04■□□□□ 0.32
SMN1-204ENST00000506163 SLC9A5Q14940 896 aa17.04■□□□□ 0.32
SMN1-204ENST00000506163 SLMAPQ14BN4 828 aa17.04■□□□□ 0.32
SMN1-204ENST00000506163 LCTLQ6UWM7 567 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms