RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 MAGED4Q96JG8 741 aa8.74□□□□□ -1.01
PTPN20-216ENST00000506080 GBP4Q96PP9 640 aa8.74□□□□□ -1.01
PTPN20-216ENST00000506080 MIPEPQ99797 713 aa8.74□□□□□ -1.01
PTPN20-216ENST00000506080 C19orf43Q9BQ61 176 aa8.74□□□□□ -1.01
PTPN20-216ENST00000506080 MENTQ9BUN1 341 aa8.74□□□□□ -1.01
PTPN20-216ENST00000506080 TSPAN10Q9H1Z9 355 aaPredicted RBP8.74□□□□□ -1.01
PTPN20-216ENST00000506080 PRM3Q9NNZ6 103 aa8.74□□□□□ -1.01
PTPN20-216ENST00000506080 RIC8BQ9NVN3 520 aa8.74□□□□□ -1.01
PTPN20-216ENST00000506080 PIH1D1Q9NWS0 290 aaKnown RBP8.74□□□□□ -1.01
PTPN20-216ENST00000506080 FAM169AQ9Y6X4 670 aa8.74□□□□□ -1.01
PTPN20-216ENST00000506080 NCOA6Q14686 2063 aaPredicted RBP8.74□□□□□ -1.01
PTPN20-216ENST00000506080 APOC4-APOC2K7ER74 178 aa8.73□□□□□ -1.01
PTPN20-216ENST00000506080 ZNHIT1O43257 154 aa8.73□□□□□ -1.01
PTPN20-216ENST00000506080 OR1I1O60431 355 aa8.73□□□□□ -1.01
PTPN20-216ENST00000506080 SRPX2O60687 465 aaPredicted RBP8.73□□□□□ -1.01
PTPN20-216ENST00000506080 MBD3O95983 291 aa8.73□□□□□ -1.01
PTPN20-216ENST00000506080 APOC2P02655 101 aa8.73□□□□□ -1.01
PTPN20-216ENST00000506080 HEXBP07686 556 aa8.73□□□□□ -1.01
PTPN20-216ENST00000506080 MSNP26038 577 aaKnown RBP8.73□□□□□ -1.01
PTPN20-216ENST00000506080 CCR7P32248 378 aa8.73□□□□□ -1.01
PTPN20-216ENST00000506080 TPM4P67936 248 aa8.73□□□□□ -1.01
PTPN20-216ENST00000506080 CSNK1G2P78368 415 aa8.73□□□□□ -1.01
PTPN20-216ENST00000506080 PLOD1Q02809 727 aaPredicted RBP8.73□□□□□ -1.01
PTPN20-216ENST00000506080 ZNF33BQ06732 778 aa8.73□□□□□ -1.01
PTPN20-216ENST00000506080 PCOLCEQ15113 449 aa8.73□□□□□ -1.01
PTPN20-216ENST00000506080 ZNF766Q5HY98 468 aa8.73□□□□□ -1.01
PTPN20-216ENST00000506080 ABHD17BQ5VST6 288 aa8.73□□□□□ -1.01
PTPN20-216ENST00000506080 PRMT9Q6P2P2 845 aa8.73□□□□□ -1.01
PTPN20-216ENST00000506080 PACS1Q6VY07 963 aa8.73□□□□□ -1.01
PTPN20-216ENST00000506080 MEX3BQ6ZN04 569 aaKnown RBP8.73□□□□□ -1.01
PTPN20-216ENST00000506080 BBS12Q6ZW61 710 aa8.73□□□□□ -1.01
PTPN20-216ENST00000506080 NEK10Q6ZWH5 1172 aa8.73□□□□□ -1.01
PTPN20-216ENST00000506080 DCUN1D3Q8IWE4 304 aa8.73□□□□□ -1.01
PTPN20-216ENST00000506080 RCOR2Q8IZ40 523 aa8.73□□□□□ -1.01
PTPN20-216ENST00000506080 OR2L8Q8NGY9 312 aa8.73□□□□□ -1.01
PTPN20-216ENST00000506080 LKAAEAR1Q8TD35 194 aa8.73□□□□□ -1.01
PTPN20-216ENST00000506080 STYXQ8WUJ0 223 aa8.73□□□□□ -1.01
PTPN20-216ENST00000506080 ZUFSPQ96AP4 578 aa8.73□□□□□ -1.01
PTPN20-216ENST00000506080 C10orf90Q96M02 699 aa8.73□□□□□ -1.01
PTPN20-216ENST00000506080 CHP1Q99653 195 aa8.73□□□□□ -1.01
PTPN20-216ENST00000506080 FERMT1Q9BQL6 677 aa8.73□□□□□ -1.01
PTPN20-216ENST00000506080 ARNT2Q9HBZ2 717 aa8.73□□□□□ -1.01
PTPN20-216ENST00000506080 MCCC2Q9HCC0 563 aa8.73□□□□□ -1.01
PTPN20-216ENST00000506080 ENAMQ9NRM1 1142 aa8.73□□□□□ -1.01
PTPN20-216ENST00000506080 STMN3Q9NZ72 180 aa8.73□□□□□ -1.01
PTPN20-216ENST00000506080 IFNKQ9P0W0 207 aa8.73□□□□□ -1.01
PTPN20-216ENST00000506080 FEZ2Q9UHY8 353 aaPredicted RBP8.73□□□□□ -1.01
PTPN20-216ENST00000506080 SLC39A10Q9ULF5 831 aa8.73□□□□□ -1.01
PTPN20-216ENST00000506080 MEMO1Q9Y316 297 aa8.73□□□□□ -1.01
PTPN20-216ENST00000506080 GTF3C3Q9Y5Q9 886 aa8.73□□□□□ -1.01
PTPN20-216ENST00000506080 ALG6Q9Y672 507 aa8.73□□□□□ -1.01
PTPN20-216ENST00000506080 MTORP42345 2549 aa8.73□□□□□ -1.01
PTPN20-216ENST00000506080 IGLV3-12A0A075B6K2 115 aa8.72□□□□□ -1.01
PTPN20-216ENST00000506080 KRT87PA6NCN2 255 aa8.72□□□□□ -1.01
PTPN20-216ENST00000506080 IQCF5A8MTL0 148 aa8.72□□□□□ -1.01
PTPN20-216ENST00000506080 A8MUI8 341 aa8.72□□□□□ -1.01
PTPN20-216ENST00000506080 TARM1B6A8C7 271 aa8.72□□□□□ -1.01
PTPN20-216ENST00000506080 NPIPA5E9PKD4 350 aa8.72□□□□□ -1.01
PTPN20-216ENST00000506080 GOLGA6L22H0YM25 854 aa8.72□□□□□ -1.01
PTPN20-216ENST00000506080 RASGRF2O14827 1237 aa8.72□□□□□ -1.01
PTPN20-216ENST00000506080 STK10O94804 968 aaKnown RBP8.72□□□□□ -1.01
PTPN20-216ENST00000506080 MYBL2P10244 700 aa8.72□□□□□ -1.01
PTPN20-216ENST00000506080 ERVK-10P10266 1014 aa8.72□□□□□ -1.01
PTPN20-216ENST00000506080 RBP3P10745 1247 aa8.72□□□□□ -1.01
PTPN20-216ENST00000506080 FOXN2P32314 431 aa8.72□□□□□ -1.01
PTPN20-216ENST00000506080 EIF3EP60228 445 aaKnown RBP8.72□□□□□ -1.01
PTPN20-216ENST00000506080 MUM1Q2TAK8 710 aa8.72□□□□□ -1.01
PTPN20-216ENST00000506080 FCRLBQ6BAA4 426 aa8.72□□□□□ -1.01
PTPN20-216ENST00000506080 DARS2Q6PI48 645 aaKnown RBP8.72□□□□□ -1.01
PTPN20-216ENST00000506080 C3P1Q6ZMU1 363 aa8.72□□□□□ -1.01
PTPN20-216ENST00000506080 SPPL2CQ8IUH8 684 aa8.72□□□□□ -1.01
PTPN20-216ENST00000506080 CDKL3Q8IVW4 592 aaPredicted RBP8.72□□□□□ -1.01
PTPN20-216ENST00000506080 KATNAL2Q8IYT4 538 aa8.72□□□□□ -1.01
PTPN20-216ENST00000506080 SLC22A15Q8IZD6 547 aa8.72□□□□□ -1.01
PTPN20-216ENST00000506080 OR8K1Q8NGG5 319 aa8.72□□□□□ -1.01
PTPN20-216ENST00000506080 ACTL9Q8TC94 416 aa8.72□□□□□ -1.01
PTPN20-216ENST00000506080 LRRC45Q96CN5 670 aa8.72□□□□□ -1.01
PTPN20-216ENST00000506080 CABS1Q96KC9 395 aa8.72□□□□□ -1.01
PTPN20-216ENST00000506080 CCDC42Q96M95 316 aa8.72□□□□□ -1.01
PTPN20-216ENST00000506080 GPR137Q96N19 417 aa8.72□□□□□ -1.01
PTPN20-216ENST00000506080 SPATA13Q96N96 652 aa8.72□□□□□ -1.01
PTPN20-216ENST00000506080 ALS2CR12Q96Q35 445 aa8.72□□□□□ -1.01
PTPN20-216ENST00000506080 SPOCK3Q9BQ16 436 aa8.72□□□□□ -1.01
PTPN20-216ENST00000506080 HES7Q9BYE0 225 aa8.72□□□□□ -1.01
PTPN20-216ENST00000506080 RNF32Q9H0A6 362 aa8.72□□□□□ -1.01
PTPN20-216ENST00000506080 KLHL1Q9NR64 748 aa8.72□□□□□ -1.01
PTPN20-216ENST00000506080 TRPC4Q9UBN4 977 aa8.72□□□□□ -1.01
PTPN20-216ENST00000506080 NPIPA1Q9UND3 350 aa8.72□□□□□ -1.01
PTPN20-216ENST00000506080 ZNF835Q9Y2P0 537 aa8.72□□□□□ -1.01
PTPN20-216ENST00000506080 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.72□□□□□ -1.01
PTPN20-216ENST00000506080 CPAMD8Q8IZJ3 1885 aa8.72□□□□□ -1.01
PTPN20-216ENST00000506080 CACNA1CQ13936 2221 aa8.72□□□□□ -1.01
PTPN20-216ENST00000506080 CCDC162PA2VCL2 907 aa8.71□□□□□ -1.01
PTPN20-216ENST00000506080 TTI1O43156 1089 aa8.71□□□□□ -1.01
PTPN20-216ENST00000506080 RPN2P04844 631 aa8.71□□□□□ -1.01
PTPN20-216ENST00000506080 CD1EP15812 388 aa8.71□□□□□ -1.01
PTPN20-216ENST00000506080 CTNNA2P26232 953 aa8.71□□□□□ -1.01
PTPN20-216ENST00000506080 BDKRB1P46663 353 aa8.71□□□□□ -1.01
PTPN20-216ENST00000506080 ART1P52961 327 aa8.71□□□□□ -1.01
PTPN20-216ENST00000506080 YBX1P67809 324 aaKnown RBP8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms