RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 LILRA3Q8N6C8 439 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC11-204ENST00000505676 ZNF513Q8N8E2 541 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC11-204ENST00000505676 VPS37AQ8NEZ2 397 aa16.71■□□□□ 0.27
TRAPPC11-204ENST00000505676 OR7G3Q8NG95 312 aa16.71■□□□□ 0.27
TRAPPC11-204ENST00000505676 TSSK3Q96PN8 268 aa16.71■□□□□ 0.27
TRAPPC11-204ENST00000505676 CPPED1Q9BRF8 314 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC11-204ENST00000505676 SPATA9Q9BWV2 254 aa16.71■□□□□ 0.27
TRAPPC11-204ENST00000505676 TEX101Q9BY14 249 aa16.71■□□□□ 0.27
TRAPPC11-204ENST00000505676 PLA2G2FQ9BZM2 168 aa16.71■□□□□ 0.27
TRAPPC11-204ENST00000505676 PITHD1Q9GZP4 211 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC11-204ENST00000505676 GMPR2Q9P2T1 348 aaKnown RBP16.71■□□□□ 0.27
TRAPPC11-204ENST00000505676 HCN2Q9UL51 889 aa16.71■□□□□ 0.27
TRAPPC11-204ENST00000505676 PADI4Q9UM07 663 aa16.71■□□□□ 0.27
TRAPPC11-204ENST00000505676 GMEB1Q9Y692 573 aa16.71■□□□□ 0.27
TRAPPC11-204ENST00000505676 AP1M2Q9Y6Q5 423 aa16.71■□□□□ 0.27
TRAPPC11-204ENST00000505676 PPIBP23284 216 aaKnown RBP16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 SERPINB1P30740 379 aa16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 HPCAL1P37235 193 aa16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 PIK3CBP42338 1070 aa16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 PRKCQQ04759 706 aa16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 DUOXA1Q1HG43 343 aa16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 ANXA8L1Q5VT79 327 aa16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 TRIM74Q86UV6 250 aa16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 MICU2Q8IYU8 434 aa16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 GALNT4Q8N4A0 578 aa16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 DTWD1Q8N5C7 304 aa16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 FAM131CQ96AQ9 280 aa16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 ZDHHC5Q9C0B5 715 aa16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 SEMA6AQ9H2E6 1030 aa16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 MAGIXQ9H6Y5 334 aa16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 KAT8Q9H7Z6 458 aaKnown RBP16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 SERHLQ9NQF3 203 aa16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 OLAHQ9NV23 265 aa16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 ACSL5Q9ULC5 683 aa16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 SCML1Q9UN30 329 aa16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 CORO2BQ9UQ03 480 aa16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 LRRK1Q38SD2 2015 aa16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 EVPLLA8MZ36 301 aa16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 RFXANKO14593 260 aa16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 DEAF1O75398 565 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 MTHFD1P11586 935 aaKnown RBP16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 HOXB9P17482 250 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 CHRNB3Q05901 458 aa16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 DMPKQ09013 629 aa16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 CCSMST1Q4G0I0 132 aa16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 SDE2Q6IQ49 451 aa16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 ERICH5Q6P6B1 374 aa16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 SPRED1Q7Z699 444 aa16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 AMIGO2Q86SJ2 522 aa16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 CALHM3Q86XJ0 350 aa16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 LRRC56Q8IYG6 542 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 RAB42Q8N4Z0 105 aa16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 CHTF18Q8WVB6 975 aa16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 SLC5A11Q8WWX8 675 aa16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 REXO5Q96IC2 774 aaKnown RBP16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 KXD1Q9BQD3 176 aa16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 ZNF696Q9H7X3 374 aa16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 PHPT1Q9NRX4 125 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 NDUFA13Q9P0J0 144 aa16.7■□□□□ 0.26
TRAPPC11-204ENST00000505676 MID1O15344 667 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 RASAL1O95294 804 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 FAM58BPP0C7Q3 252 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 ERGP11308 486 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 NPPBP16860 134 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 RPS21P63220 83 aaKnown RBP16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 TAP2Q03519 686 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 SFSWAPQ12872 951 aaKnown RBP16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 ADAM15Q13444 863 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 ADRM1Q16186 407 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 TMPRSS11BQ86T26 416 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 SERPINA11Q86U17 422 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 SFTPA1Q8IWL2 248 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 MSRB3Q8IXL7 192 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 NEIL2Q969S2 332 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 FAM120BQ96EK7 910 aaKnown RBP16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 CENPKQ9BS16 269 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 SLC25A37Q9NYZ2 338 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 PCDHB14Q9Y5E9 798 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 PRRC2BQ5JSZ5 2229 aaKnown RBP16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 EPOPA6NHQ4 379 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 PLK4O00444 970 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 PCDH8O95206 1070 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 CXCR2P25025 360 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 OXTRP30559 389 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 TRIM23P36406 574 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 YBX1P67809 324 aaKnown RBP16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 SELPLGQ14242 412 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 STARD3Q14849 445 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 WSCD2Q2TBF2 565 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 METRNLQ641Q3 311 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 CRTC3Q6UUV7 619 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 NXPE4Q6UWF7 544 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 XKR5Q6UX68 686 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 RALGPS2Q86X27 583 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 EID3Q8N140 333 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 KRT78Q8N1N4 520 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 HDDC3Q8N4P3 179 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 OR10A6Q8NH74 314 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 CLHC1Q8NHS4 586 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 HUS1BQ8NHY5 278 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms