RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 A0A1W2PPQ1 181 aa2.95□□□□□ -1.94
SMC4-227ENST00000497984 TCRBV21S2A2A0A5A6 115 aa2.95□□□□□ -1.94
SMC4-227ENST00000497984 ENO4A6NNW6 628 aa2.95□□□□□ -1.94
SMC4-227ENST00000497984 ERAL1O75616 437 aaKnown RBP2.95□□□□□ -1.94
SMC4-227ENST00000497984 KRT33AO76009 404 aa2.95□□□□□ -1.94
SMC4-227ENST00000497984 BEST1O76090 585 aa2.95□□□□□ -1.94
SMC4-227ENST00000497984 IGHEP01854 428 aa2.95□□□□□ -1.94
SMC4-227ENST00000497984 THEGLP0DJG4 465 aa2.95□□□□□ -1.94
SMC4-227ENST00000497984 HAPLN1P10915 354 aaPredicted RBP2.95□□□□□ -1.94
SMC4-227ENST00000497984 GP1BBP13224 206 aa2.95□□□□□ -1.94
SMC4-227ENST00000497984 CDH3P22223 829 aa2.95□□□□□ -1.94
SMC4-227ENST00000497984 LIG4P49917 911 aa2.95□□□□□ -1.94
SMC4-227ENST00000497984 KLC1Q07866 573 aa2.95□□□□□ -1.94
SMC4-227ENST00000497984 TAF10Q12962 218 aa2.95□□□□□ -1.94
SMC4-227ENST00000497984 ITGA7Q13683 1181 aa2.95□□□□□ -1.94
SMC4-227ENST00000497984 FAM166AQ6J272 317 aa2.95□□□□□ -1.94
SMC4-227ENST00000497984 RTN4RL2Q86UN3 420 aa2.95□□□□□ -1.94
SMC4-227ENST00000497984 ZNF595Q8IYB9 648 aa2.95□□□□□ -1.94
SMC4-227ENST00000497984 CDK20Q8IZL9 346 aa2.95□□□□□ -1.94
SMC4-227ENST00000497984 FGFRL1Q8N441 504 aa2.95□□□□□ -1.94
SMC4-227ENST00000497984 TDRD5Q8NAT2 981 aaKnown RBP2.95□□□□□ -1.94
SMC4-227ENST00000497984 OR11H4Q8NGC9 324 aa2.95□□□□□ -1.94
SMC4-227ENST00000497984 ATP8B4Q8TF62 1192 aa2.95□□□□□ -1.94
SMC4-227ENST00000497984 CHMP4AQ9BY43 222 aa2.95□□□□□ -1.94
SMC4-227ENST00000497984 FAM49AQ9H0Q0 323 aaPredicted RBP2.95□□□□□ -1.94
SMC4-227ENST00000497984 OPA3Q9H6K4 179 aa2.95□□□□□ -1.94
SMC4-227ENST00000497984 Q9N2K0 584 aa2.95□□□□□ -1.94
SMC4-227ENST00000497984 PIH1D3Q9NQM4 214 aaKnown RBP2.95□□□□□ -1.94
SMC4-227ENST00000497984 FAM207AQ9NSI2 230 aaPredicted RBP2.95□□□□□ -1.94
SMC4-227ENST00000497984 CPSF2Q9P2I0 782 aaKnown RBP2.95□□□□□ -1.94
SMC4-227ENST00000497984 ZNF107Q9UII5 783 aaPredicted RBP2.95□□□□□ -1.94
SMC4-227ENST00000497984 PCDHGB4Q9UN71 923 aa2.95□□□□□ -1.94
SMC4-227ENST00000497984 STUB1Q9UNE7 303 aa2.95□□□□□ -1.94
SMC4-227ENST00000497984 LOC105371242A0A075B767 164 aa2.94□□□□□ -1.94
SMC4-227ENST00000497984 NEMP2A6NFY4 417 aa2.94□□□□□ -1.94
SMC4-227ENST00000497984 MEIS2O14770 477 aa2.94□□□□□ -1.94
SMC4-227ENST00000497984 EPHB6O15197 1021 aa2.94□□□□□ -1.94
SMC4-227ENST00000497984 RAB40ALP0C0E4 278 aa2.94□□□□□ -1.94
SMC4-227ENST00000497984 NR2F1P10589 423 aa2.94□□□□□ -1.94
SMC4-227ENST00000497984 HLA-FP30511 346 aa2.94□□□□□ -1.94
SMC4-227ENST00000497984 CSTF2P33240 577 aaKnown RBP eCLIP2.94□□□□□ -1.94
SMC4-227ENST00000497984 NNMTP40261 264 aa2.94□□□□□ -1.94
SMC4-227ENST00000497984 ETV5P41161 510 aa2.94□□□□□ -1.94
SMC4-227ENST00000497984 RPL21P46778 160 aaKnown RBP2.94□□□□□ -1.94
SMC4-227ENST00000497984 GCNT1Q02742 428 aa2.94□□□□□ -1.94
SMC4-227ENST00000497984 CD300CQ08708 224 aa2.94□□□□□ -1.94
SMC4-227ENST00000497984 ZNF415Q09FC8 603 aa2.94□□□□□ -1.94
SMC4-227ENST00000497984 HERC3Q15034 1050 aa2.94□□□□□ -1.94
SMC4-227ENST00000497984 UGT3A2Q3SY77 523 aa2.94□□□□□ -1.94
SMC4-227ENST00000497984 LCN1P1Q5VSP4 162 aa2.94□□□□□ -1.94
SMC4-227ENST00000497984 GARNL3Q5VVW2 1013 aa2.94□□□□□ -1.94
SMC4-227ENST00000497984 GDPGP1Q6ZNW5 385 aa2.94□□□□□ -1.94
SMC4-227ENST00000497984 Q6ZVH6 145 aa2.94□□□□□ -1.94
SMC4-227ENST00000497984 RAPH1Q70E73 1250 aa2.94□□□□□ -1.94
SMC4-227ENST00000497984 CEACAM19Q7Z692 300 aa2.94□□□□□ -1.94
SMC4-227ENST00000497984 TMPRSS11BQ86T26 416 aa2.94□□□□□ -1.94
SMC4-227ENST00000497984 TYMSOSQ8TAI1 123 aa2.94□□□□□ -1.94
SMC4-227ENST00000497984 RFT1Q96AA3 541 aa2.94□□□□□ -1.94
SMC4-227ENST00000497984 PTERQ96BW5 349 aa2.94□□□□□ -1.94
SMC4-227ENST00000497984 FAM20AQ96MK3 541 aa2.94□□□□□ -1.94
SMC4-227ENST00000497984 DGAT2Q96PD7 388 aa2.94□□□□□ -1.94
SMC4-227ENST00000497984 NOL11Q9H8H0 719 aaKnown RBP2.94□□□□□ -1.94
SMC4-227ENST00000497984 PRMT7Q9NVM4 692 aaPredicted RBP2.94□□□□□ -1.94
SMC4-227ENST00000497984 C19orf25Q9UFG5 118 aaPredicted RBP2.94□□□□□ -1.94
SMC4-227ENST00000497984 ANAPC2Q9UJX6 822 aa2.94□□□□□ -1.94
SMC4-227ENST00000497984 FBXO2Q9UK22 296 aaPredicted RBP2.94□□□□□ -1.94
SMC4-227ENST00000497984 PADI2Q9Y2J8 665 aa2.94□□□□□ -1.94
SMC4-227ENST00000497984 A0A087WUV0 522 aaPredicted RBP2.93□□□□□ -1.94
SMC4-227ENST00000497984 IGKV6D-21A0A0A0MT36 114 aa2.93□□□□□ -1.94
SMC4-227ENST00000497984 A8MV72 311 aaPredicted RBP2.93□□□□□ -1.94
SMC4-227ENST00000497984 A8MXK9 166 aa2.93□□□□□ -1.94
SMC4-227ENST00000497984 H0YAE9 185 aa2.93□□□□□ -1.94
SMC4-227ENST00000497984 GPRIN2O60269 458 aa2.93□□□□□ -1.94
SMC4-227ENST00000497984 GFPT2O94808 682 aa2.93□□□□□ -1.94
SMC4-227ENST00000497984 DDHD2O94830 711 aa2.93□□□□□ -1.94
SMC4-227ENST00000497984 ABCB1P08183 1280 aaPredicted RBP2.93□□□□□ -1.94
SMC4-227ENST00000497984 SLC2A2P11168 524 aaPredicted RBP2.93□□□□□ -1.94
SMC4-227ENST00000497984 EFTUD2Q15029 972 aaKnown RBP eCLIP2.93□□□□□ -1.947e-8■■□□□ 11.8
SMC4-227ENST00000497984 PHKG1Q16816 387 aa2.93□□□□□ -1.94
SMC4-227ENST00000497984 EIPR1Q53HC9 387 aa2.93□□□□□ -1.94
SMC4-227ENST00000497984 MFSD12Q6NUT3 480 aa2.93□□□□□ -1.94
SMC4-227ENST00000497984 NDUFAF2Q8N183 169 aa2.93□□□□□ -1.94
SMC4-227ENST00000497984 SYN2Q92777 582 aaPredicted RBP2.93□□□□□ -1.94
SMC4-227ENST00000497984 ZNF830Q96NB3 372 aaPredicted RBP2.93□□□□□ -1.94
SMC4-227ENST00000497984 GCNAQ96QF7 691 aa2.93□□□□□ -1.94
SMC4-227ENST00000497984 NKX3-1Q99801 234 aaPredicted RBP2.93□□□□□ -1.94
SMC4-227ENST00000497984 MXD3Q9BW11 206 aa2.93□□□□□ -1.94
SMC4-227ENST00000497984 HAO2Q9NYQ3 351 aa2.93□□□□□ -1.94
SMC4-227ENST00000497984 K7ENM7 598 aa2.92□□□□□ -1.94
SMC4-227ENST00000497984 PTGESO14684 152 aa2.92□□□□□ -1.94
SMC4-227ENST00000497984 ARPC2O15144 300 aa2.92□□□□□ -1.94
SMC4-227ENST00000497984 TRUB2O95900 331 aaKnown RBP2.92□□□□□ -1.94
SMC4-227ENST00000497984 DNASE1P24855 282 aa2.92□□□□□ -1.94
SMC4-227ENST00000497984 MPZP25189 248 aa2.92□□□□□ -1.94
SMC4-227ENST00000497984 PTPN3P26045 913 aa2.92□□□□□ -1.94
SMC4-227ENST00000497984 PTGER4P35408 488 aa2.92□□□□□ -1.94
SMC4-227ENST00000497984 ACTN2P35609 894 aa2.92□□□□□ -1.94
SMC4-227ENST00000497984 TSFMP43897 325 aaKnown RBP2.92□□□□□ -1.94
SMC4-227ENST00000497984 ASCL1P50553 236 aa2.92□□□□□ -1.94
SMC4-227ENST00000497984 HNRNPKP61978 463 aaKnown RBP eCLIP2.92□□□□□ -1.945e-13■■■■■ 46
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms