RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 VPS50Q96JG6 964 aa12.36□□□□□ -0.43
FN1-226ENST00000496542 C10orf90Q96M02 699 aa12.36□□□□□ -0.43
FN1-226ENST00000496542 PKP4Q99569 1192 aa12.36□□□□□ -0.43
FN1-226ENST00000496542 SLC30A3Q99726 388 aa12.36□□□□□ -0.43
FN1-226ENST00000496542 WDR77Q9BQA1 342 aaPredicted RBP12.36□□□□□ -0.43
FN1-226ENST00000496542 CCDC68Q9H2F9 335 aa12.36□□□□□ -0.43
FN1-226ENST00000496542 ENAMQ9NRM1 1142 aa12.36□□□□□ -0.43
FN1-226ENST00000496542 SEMA3GQ9NS98 782 aa12.36□□□□□ -0.43
FN1-226ENST00000496542 ABCF3Q9NUQ8 709 aa12.36□□□□□ -0.43
FN1-226ENST00000496542 TAC3Q9UHF0 121 aa12.36□□□□□ -0.43
FN1-226ENST00000496542 CSAG2Q9Y5P2 127 aa12.36□□□□□ -0.43
FN1-226ENST00000496542 VSTM2BA6NLU5 285 aa12.35□□□□□ -0.43
FN1-226ENST00000496542 KIF5CO60282 957 aa12.35□□□□□ -0.43
FN1-226ENST00000496542 VPS26AO75436 327 aa12.35□□□□□ -0.43
FN1-226ENST00000496542 SYF2O95926 243 aaKnown RBP12.35□□□□□ -0.43
FN1-226ENST00000496542 RNF224P0DH78 156 aa12.35□□□□□ -0.43
FN1-226ENST00000496542 MLNP12872 115 aa12.35□□□□□ -0.43
FN1-226ENST00000496542 COILP38432 576 aaPredicted RBP12.35□□□□□ -0.43
FN1-226ENST00000496542 SLC1A2P43004 574 aa12.35□□□□□ -0.43
FN1-226ENST00000496542 GLRBP48167 497 aa12.35□□□□□ -0.43
FN1-226ENST00000496542 PNLIPRP1P54315 467 aa12.35□□□□□ -0.43
FN1-226ENST00000496542 KLC1Q07866 573 aa12.35□□□□□ -0.43
FN1-226ENST00000496542 CTBP1Q13363 440 aa12.35□□□□□ -0.43
FN1-226ENST00000496542 ARHGAP19Q14CB8 494 aa12.35□□□□□ -0.43
FN1-226ENST00000496542 MUM1Q2TAK8 710 aa12.35□□□□□ -0.43
FN1-226ENST00000496542 AGAP7PQ5VUJ5 663 aa12.35□□□□□ -0.43
FN1-226ENST00000496542 ICE2Q659A1 982 aa12.35□□□□□ -0.43
FN1-226ENST00000496542 PRMT9Q6P2P2 845 aa12.35□□□□□ -0.43
FN1-226ENST00000496542 FBXO42Q6P3S6 717 aa12.35□□□□□ -0.43
FN1-226ENST00000496542 Q6ZS92 163 aa12.35□□□□□ -0.43
FN1-226ENST00000496542 ADCK2Q7Z695 626 aa12.35□□□□□ -0.43
FN1-226ENST00000496542 CUZD1Q86UP6 607 aa12.35□□□□□ -0.43
FN1-226ENST00000496542 PAQR7Q86WK9 346 aa12.35□□□□□ -0.43
FN1-226ENST00000496542 RASGEF1CQ8N431 466 aa12.35□□□□□ -0.43
FN1-226ENST00000496542 CSNK1A1LQ8N752 337 aa12.35□□□□□ -0.43
FN1-226ENST00000496542 PPFIBP2Q8ND30 876 aa12.35□□□□□ -0.43
FN1-226ENST00000496542 MCUQ8NE86 351 aa12.35□□□□□ -0.43
FN1-226ENST00000496542 STT3BQ8TCJ2 826 aa12.35□□□□□ -0.43
FN1-226ENST00000496542 MIEF2Q96C03 454 aa12.35□□□□□ -0.43
FN1-226ENST00000496542 PBKQ96KB5 322 aa12.35□□□□□ -0.43
FN1-226ENST00000496542 CNDP1Q96KN2 507 aa12.35□□□□□ -0.43
FN1-226ENST00000496542 SERPINB12Q96P63 405 aa12.35□□□□□ -0.43
FN1-226ENST00000496542 AGAP4Q96P64 663 aa12.35□□□□□ -0.43
FN1-226ENST00000496542 PLCD4Q9BRC7 762 aa12.35□□□□□ -0.43
FN1-226ENST00000496542 MESP1Q9BRJ9 268 aa12.35□□□□□ -0.43
FN1-226ENST00000496542 YIPF2Q9BWQ6 316 aa12.35□□□□□ -0.43
FN1-226ENST00000496542 ZNF282Q9UDV7 671 aaPredicted RBP12.35□□□□□ -0.43
FN1-226ENST00000496542 PLEKHB1Q9UF11 243 aaPredicted RBP12.35□□□□□ -0.43
FN1-226ENST00000496542 C3orf18Q9UK00 162 aa12.35□□□□□ -0.43
FN1-226ENST00000496542 PCDHGA10Q9Y5H3 936 aa12.35□□□□□ -0.43
FN1-226ENST00000496542 MAD1L1Q9Y6D9 718 aa12.35□□□□□ -0.43
FN1-226ENST00000496542 IGKV1-8A0A0C4DH67 115 aa12.34□□□□□ -0.43
FN1-226ENST00000496542 ZCWPW2A0A1B0GU75 182 aa12.34□□□□□ -0.43
FN1-226ENST00000496542 A1L4Q6 167 aa12.34□□□□□ -0.43
FN1-226ENST00000496542 MAGEB16A2A368 324 aa12.34□□□□□ -0.43
FN1-226ENST00000496542 ZNF839A8K0R7 811 aa12.34□□□□□ -0.43
FN1-226ENST00000496542 SMAPO00193 183 aa12.34□□□□□ -0.43
FN1-226ENST00000496542 PGRMC1O00264 195 aaKnown RBP12.34□□□□□ -0.43
FN1-226ENST00000496542 MAP2K7O14733 419 aa12.34□□□□□ -0.43
FN1-226ENST00000496542 FFAR3O14843 346 aa12.34□□□□□ -0.43
FN1-226ENST00000496542 GPR42O15529 346 aa12.34□□□□□ -0.43
FN1-226ENST00000496542 PHF2O75151 1096 aa12.34□□□□□ -0.43
FN1-226ENST00000496542 CCNDBP1O95273 360 aa12.34□□□□□ -0.43
FN1-226ENST00000496542 SLC16A8O95907 504 aa12.34□□□□□ -0.43
FN1-226ENST00000496542 ZGLP1P0C6A0 271 aa12.34□□□□□ -0.43
FN1-226ENST00000496542 ACPPP15309 386 aa12.34□□□□□ -0.43
FN1-226ENST00000496542 HSD17B2P37059 387 aa12.34□□□□□ -0.43
FN1-226ENST00000496542 CARSP49589 748 aaKnown RBP12.34□□□□□ -0.43
FN1-226ENST00000496542 LONRF1Q17RB8 773 aa12.34□□□□□ -0.43
FN1-226ENST00000496542 HKDC1Q2TB90 917 aa12.34□□□□□ -0.43
FN1-226ENST00000496542 PRTGQ2VWP7 1150 aa12.34□□□□□ -0.43
FN1-226ENST00000496542 C4orf17Q53FE4 359 aa12.34□□□□□ -0.43
FN1-226ENST00000496542 ZNF549Q6P9A3 640 aa12.34□□□□□ -0.43
FN1-226ENST00000496542 CCDC137Q6PK04 289 aaKnown RBP12.34□□□□□ -0.43
FN1-226ENST00000496542 NEK10Q6ZWH5 1172 aa12.34□□□□□ -0.43
FN1-226ENST00000496542 RERGQ96A58 199 aaPredicted RBP12.34□□□□□ -0.43
FN1-226ENST00000496542 C8orf44Q96CB5 159 aa12.34□□□□□ -0.43
FN1-226ENST00000496542 THOC3Q96J01 351 aaKnown RBP12.34□□□□□ -0.43
FN1-226ENST00000496542 GPR21Q99679 349 aa12.34□□□□□ -0.43
FN1-226ENST00000496542 LHPPQ9H008 270 aa12.34□□□□□ -0.43
FN1-226ENST00000496542 SYNPO2LQ9H987 977 aa12.34□□□□□ -0.43
FN1-226ENST00000496542 ZNF160Q9HCG1 818 aa12.34□□□□□ -0.43
FN1-226ENST00000496542 C20orf96Q9NUD7 363 aaPredicted RBP12.34□□□□□ -0.43
FN1-226ENST00000496542 PCYOX1Q9UHG3 505 aa12.34□□□□□ -0.43
FN1-226ENST00000496542 NOVA2Q9UNW9 492 aaKnown RBP12.34□□□□□ -0.43
FN1-226ENST00000496542 RUVBL1Q9Y265 456 aaKnown RBP12.34□□□□□ -0.43
FN1-226ENST00000496542 MED16Q9Y2X0 877 aa12.34□□□□□ -0.43
FN1-226ENST00000496542 JRKLQ9Y4A0 524 aa12.34□□□□□ -0.43
FN1-226ENST00000496542 COPG1Q9Y678 874 aaKnown RBP12.34□□□□□ -0.43
FN1-226ENST00000496542 ITPR2Q14571 2701 aa12.34□□□□□ -0.43
FN1-226ENST00000496542 ANKUB1A6NFN9 424 aa12.33□□□□□ -0.44
FN1-226ENST00000496542 HAT1O14929 419 aa12.33□□□□□ -0.44
FN1-226ENST00000496542 HPP00738 406 aa12.33□□□□□ -0.44
FN1-226ENST00000496542 MPC1LP0DKB6 136 aa12.33□□□□□ -0.44
FN1-226ENST00000496542 MPP1Q00013 466 aa12.33□□□□□ -0.44
FN1-226ENST00000496542 PRDX1Q06830 199 aaKnown RBP12.33□□□□□ -0.44
FN1-226ENST00000496542 Q0VFX4 171 aa12.33□□□□□ -0.44
FN1-226ENST00000496542 DSG2Q14126 1118 aa12.33□□□□□ -0.44
FN1-226ENST00000496542 ELOAQ14241 798 aaKnown RBP12.33□□□□□ -0.44
FN1-226ENST00000496542 VWA2Q5GFL6 755 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms