RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 KRT77Q7Z794 578 aa9.11□□□□□ -0.95
SMARCAL1-213ENST00000496037 MCATQ8IVS2 390 aaKnown RBP9.11□□□□□ -0.95
SMARCAL1-213ENST00000496037 ADGRF3Q8IZF5 1079 aa9.11□□□□□ -0.95
SMARCAL1-213ENST00000496037 BEST3Q8N1M1 668 aa9.11□□□□□ -0.95
SMARCAL1-213ENST00000496037 DNAJC22Q8N4W6 341 aa9.11□□□□□ -0.95
SMARCAL1-213ENST00000496037 HORMAD2Q8N7B1 307 aa9.11□□□□□ -0.95
SMARCAL1-213ENST00000496037 MDS2Q8NDY4 140 aa9.11□□□□□ -0.95
SMARCAL1-213ENST00000496037 VPS37AQ8NEZ2 397 aa9.11□□□□□ -0.95
SMARCAL1-213ENST00000496037 OR10Q1Q8NGQ4 319 aa9.11□□□□□ -0.95
SMARCAL1-213ENST00000496037 FAM222BQ8WU58 562 aa9.11□□□□□ -0.95
SMARCAL1-213ENST00000496037 GATAD2BQ8WXI9 593 aa9.11□□□□□ -0.95
SMARCAL1-213ENST00000496037 TRIM44Q96DX7 344 aaPredicted RBP9.11□□□□□ -0.95
SMARCAL1-213ENST00000496037 UTP23Q9BRU9 249 aaKnown RBP9.11□□□□□ -0.95
SMARCAL1-213ENST00000496037 XKR8Q9H6D3 395 aa9.11□□□□□ -0.95
SMARCAL1-213ENST00000496037 RBM22Q9NW64 420 aaKnown RBP eCLIP9.11□□□□□ -0.95
SMARCAL1-213ENST00000496037 CBLCQ9ULV8 474 aa9.11□□□□□ -0.95
SMARCAL1-213ENST00000496037 ALG6Q9Y672 507 aa9.11□□□□□ -0.95
SMARCAL1-213ENST00000496037 A0A1W2PQ72 361 aa9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 F8VZ95 297 aa9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 TFECO14948 347 aaPredicted RBP9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 PHF1O43189 567 aaPredicted RBP9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 CDC40O60508 579 aaKnown RBP eCLIP9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 SUN1O94901 812 aa9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 SIX3O95343 332 aaPredicted RBP9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 CELA3AP09093 270 aa9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 MSH3P20585 1137 aa9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 AMPD1P23109 780 aa9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 PSMA2P25787 234 aa9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 UQCRC1P31930 480 aa9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 CD86P42081 329 aa9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 ZFP36L2P47974 494 aaKnown RBP9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 CCT5P48643 541 aa9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 ARSEP51690 589 aa9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 EMP2P54851 167 aa9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 GBX1Q14549 363 aa9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 SLC25A35Q3KQZ1 300 aa9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 CATSPEREQ5SY80 951 aa9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 KDELC1Q6UW63 502 aa9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 GK5Q6ZS86 529 aa9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 ARHGEF18Q6ZSZ5 1173 aa9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 DET1Q7L5Y6 550 aa9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 LRRC49Q8IUZ0 686 aa9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 PSTKQ8IV42 348 aaKnown RBP9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 RPRMLQ8N4K4 120 aa9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 DDHD1Q8NEL9 900 aa9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 ARRDC2Q8TBH0 407 aa9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 ZNF354BQ96LW1 612 aa9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 PEBP4Q96S96 227 aa9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 NRTNQ99748 197 aa9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 HGH1Q9BTY7 390 aa9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 MAGEE1Q9HCI5 957 aa9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 BPIFA1Q9NP55 256 aa9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 ETNK2Q9NVF9 386 aa9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 ANKRD10Q9NXR5 420 aa9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 ZFATQ9P243 1243 aa9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 AMACRQ9UHK6 382 aa9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 CHD3Q12873 2000 aaKnown RBP9.1□□□□□ -0.95
SMARCAL1-213ENST00000496037 TRIM64A6NGJ6 449 aa9.09□□□□□ -0.95
SMARCAL1-213ENST00000496037 TRIM64BA6NI03 449 aa9.09□□□□□ -0.95
SMARCAL1-213ENST00000496037 DDX3XO00571 662 aaKnown RBP eCLIP9.09□□□□□ -0.95
SMARCAL1-213ENST00000496037 EREGO14944 169 aa9.09□□□□□ -0.95
SMARCAL1-213ENST00000496037 SMPD2O60906 423 aa9.09□□□□□ -0.95
SMARCAL1-213ENST00000496037 SHMT2P34897 504 aa9.09□□□□□ -0.95
SMARCAL1-213ENST00000496037 MTIF2P46199 727 aaKnown RBP9.09□□□□□ -0.95
SMARCAL1-213ENST00000496037 OGDHQ02218 1023 aa9.09□□□□□ -0.95
SMARCAL1-213ENST00000496037 OC90Q02509 493 aaPredicted RBP9.09□□□□□ -0.95
SMARCAL1-213ENST00000496037 NIPAL4Q0D2K0 466 aa9.09□□□□□ -0.95
SMARCAL1-213ENST00000496037 TCTE1Q5JU00 501 aa9.09□□□□□ -0.95
SMARCAL1-213ENST00000496037 ACER2Q5QJU3 275 aa9.09□□□□□ -0.95
SMARCAL1-213ENST00000496037 GPRC6AQ5T6X5 926 aa9.09□□□□□ -0.95
SMARCAL1-213ENST00000496037 FCRLBQ6BAA4 426 aa9.09□□□□□ -0.95
SMARCAL1-213ENST00000496037 SPINK14Q6IE38 97 aa9.09□□□□□ -0.95
SMARCAL1-213ENST00000496037 UNC5DQ6UXZ4 953 aa9.09□□□□□ -0.95
SMARCAL1-213ENST00000496037 WDR53Q7Z5U6 358 aaPredicted RBP9.09□□□□□ -0.95
SMARCAL1-213ENST00000496037 PHF13Q86YI8 300 aaPredicted RBP9.09□□□□□ -0.95
SMARCAL1-213ENST00000496037 CFAP206Q8IYR0 622 aa9.09□□□□□ -0.95
SMARCAL1-213ENST00000496037 LRRC75A-AS1Q8N1F1 130 aa9.09□□□□□ -0.95
SMARCAL1-213ENST00000496037 SVOPQ8N4V2 548 aa9.09□□□□□ -0.95
SMARCAL1-213ENST00000496037 OR2A14Q96R47 310 aa9.09□□□□□ -0.95
SMARCAL1-213ENST00000496037 MVB12BQ9H7P6 319 aa9.09□□□□□ -0.95
SMARCAL1-213ENST00000496037 GRPEL1Q9HAV7 217 aa9.09□□□□□ -0.95
SMARCAL1-213ENST00000496037 ZNF304Q9HCX3 659 aa9.09□□□□□ -0.95
SMARCAL1-213ENST00000496037 CHMP5Q9NZZ3 219 aa9.09□□□□□ -0.95
SMARCAL1-213ENST00000496037 IP6K2Q9UHH9 426 aa9.09□□□□□ -0.95
SMARCAL1-213ENST00000496037 RNF8O76064 485 aa9.08□□□□□ -0.96
SMARCAL1-213ENST00000496037 GFPT2O94808 682 aa9.08□□□□□ -0.96
SMARCAL1-213ENST00000496037 HLA-DQB2P05538 268 aa9.08□□□□□ -0.96
SMARCAL1-213ENST00000496037 HEXBP07686 556 aa9.08□□□□□ -0.96
SMARCAL1-213ENST00000496037 SP1P08047 785 aa9.08□□□□□ -0.96
SMARCAL1-213ENST00000496037 CHRM5P08912 532 aaPredicted RBP9.08□□□□□ -0.96
SMARCAL1-213ENST00000496037 MX2P20592 715 aa9.08□□□□□ -0.96
SMARCAL1-213ENST00000496037 FBLP22087 321 aaKnown RBP9.08□□□□□ -0.96
SMARCAL1-213ENST00000496037 MCM3P25205 808 aa9.08□□□□□ -0.96
SMARCAL1-213ENST00000496037 CD96P40200 585 aa9.08□□□□□ -0.96
SMARCAL1-213ENST00000496037 AP1B1Q10567 949 aa9.08□□□□□ -0.96
SMARCAL1-213ENST00000496037 PRKG2Q13237 762 aa9.08□□□□□ -0.96
SMARCAL1-213ENST00000496037 ITGA9Q13797 1035 aa9.08□□□□□ -0.96
SMARCAL1-213ENST00000496037 FASTKQ14296 549 aaKnown RBP9.08□□□□□ -0.96
SMARCAL1-213ENST00000496037 MAPKAPK3Q16644 382 aa9.08□□□□□ -0.96
SMARCAL1-213ENST00000496037 MEP1AQ16819 746 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms