RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 D6RAR5 112 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 KPNA3O00505 521 aaPredicted RBP4.21□□□□□ -1.74
VPS52-222ENST00000495981 SCAMP1O15126 338 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 SLC31A1O15431 190 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 GUCY1B2O75343 617 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 CLDN11O75508 207 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 GRAP2O75791 330 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 LETM1O95202 739 aaPredicted RBP4.21□□□□□ -1.74
VPS52-222ENST00000495981 ADCY5O95622 1261 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 CD160O95971 181 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 MBPP02686 304 aaPredicted RBP4.21□□□□□ -1.74
VPS52-222ENST00000495981 TBC1D3HP0C7X1 549 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 KRT5P13647 590 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 ADRB3P13945 408 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 AKT2P31751 481 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 CCR1P32246 355 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 CHRNA3P32297 505 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 CDH5P33151 784 aaPredicted RBP4.21□□□□□ -1.74
VPS52-222ENST00000495981 ARL3P36405 182 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 ACADSBP45954 432 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 CXCR3P49682 368 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 MVDP53602 400 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 CDH15P55291 814 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 PFN3P60673 137 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 RPS7P62081 194 aaKnown RBP4.21□□□□□ -1.74
VPS52-222ENST00000495981 YWHAZP63104 245 aaKnown RBP4.21□□□□□ -1.74
VPS52-222ENST00000495981 DEUP1Q05D60 604 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 EIF2B5Q13144 721 aaKnown RBP4.21□□□□□ -1.74
VPS52-222ENST00000495981 DLG2Q15700 870 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 FAM46CQ5VWP2 391 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 KCTD16Q68DU8 428 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 TBC1D3GQ6DHY5 549 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 TBC1D3CQ6IPX1 549 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 KIAA1161Q6NSJ0 714 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 DPY19L2P1Q6NXN4 242 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 NEK5Q6P3R8 708 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 LINGO4Q6UY18 593 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 DPY19L3Q6ZPD9 716 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 Q6ZRM9 215 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 IKBIPQ70UQ0 350 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 ERN2Q76MJ5 926 aaKnown RBP4.21□□□□□ -1.74
VPS52-222ENST00000495981 TFAP2DQ7Z6R9 452 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 PRPF39Q86UA1 669 aaKnown RBP4.21□□□□□ -1.74
VPS52-222ENST00000495981 CAND1Q86VP6 1230 aaKnown RBP4.21□□□□□ -1.74
VPS52-222ENST00000495981 SLC35F3Q8IY50 421 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 TBC1D3Q8IZP1 549 aaPredicted RBP4.21□□□□□ -1.74
VPS52-222ENST00000495981 RBFAQ8N0V3 343 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 TMEM132CQ8N3T6 1108 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 ATP6V0D2Q8N8Y2 350 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 BEND2Q8NDZ0 799 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 DENND6BQ8NEG7 585 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 ZNF397Q8NF99 534 aaPredicted RBP4.21□□□□□ -1.74
VPS52-222ENST00000495981 RFWD2Q8NHY2 731 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 PDCD6IPQ8WUM4 868 aaKnown RBP4.21□□□□□ -1.74
VPS52-222ENST00000495981 KLK6Q92876 244 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 PGAP3Q96FM1 320 aaPredicted RBP4.21□□□□□ -1.74
VPS52-222ENST00000495981 BMFQ96LC9 184 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 MNTQ99583 582 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 PIP5K1AQ99755 562 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 CALN1Q9BXU9 219 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 CTDSP1Q9GZU7 261 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 CLPBQ9H078 707 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 TCEAL2Q9H3H9 227 aaPredicted RBP4.21□□□□□ -1.74
VPS52-222ENST00000495981 SYNCQ9H7C4 482 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 SYNPO2LQ9H987 977 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 SAP30LQ9HAJ7 183 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 USP29Q9HBJ7 922 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 PPP1R14DQ9NXH3 145 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 SLC25A13Q9UJS0 675 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 RPS6KA6Q9UK32 745 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 CNOT6Q9ULM6 557 aaKnown RBP4.21□□□□□ -1.74
VPS52-222ENST00000495981 ZNF711Q9Y462 761 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 FADS3Q9Y5Q0 445 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 VPS13CQ709C8 3753 aa4.21□□□□□ -1.74
VPS52-222ENST00000495981 SYNJ2BP-COX16A0A087WUM0 186 aa4.2□□□□□ -1.74
VPS52-222ENST00000495981 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.2□□□□□ -1.74
VPS52-222ENST00000495981 GOLGA6L10A0A0M3HER8 536 aa4.2□□□□□ -1.74
VPS52-222ENST00000495981 EME2A4GXA9 379 aaPredicted RBP4.2□□□□□ -1.74
VPS52-222ENST00000495981 NPIPB13A6NJU9 1138 aa4.2□□□□□ -1.74
VPS52-222ENST00000495981 LIPT2A6NK58 231 aa4.2□□□□□ -1.74
VPS52-222ENST00000495981 NPIPB5A8MRT5 1133 aa4.2□□□□□ -1.74
VPS52-222ENST00000495981 AHRRA9YTQ3 701 aa4.2□□□□□ -1.74
VPS52-222ENST00000495981 TEX22C9J3V5 150 aa4.2□□□□□ -1.74
VPS52-222ENST00000495981 NPIPB4C9JG80 1138 aa4.2□□□□□ -1.74
VPS52-222ENST00000495981 PTGES3LE9PB15 166 aa4.2□□□□□ -1.74
VPS52-222ENST00000495981 H7C0S8 307 aa4.2□□□□□ -1.74
VPS52-222ENST00000495981 NTN3O00634 580 aaPredicted RBP4.2□□□□□ -1.74
VPS52-222ENST00000495981 MED7O43513 233 aa4.2□□□□□ -1.74
VPS52-222ENST00000495981 TRIAP1O43715 76 aa4.2□□□□□ -1.74
VPS52-222ENST00000495981 MAGEC1O60732 1142 aa4.2□□□□□ -1.74
VPS52-222ENST00000495981 CSF2P04141 144 aa4.2□□□□□ -1.74
VPS52-222ENST00000495981 RHOCP08134 193 aa4.2□□□□□ -1.74
VPS52-222ENST00000495981 SLC2A3P11169 496 aa4.2□□□□□ -1.74
VPS52-222ENST00000495981 IGFBP2P18065 325 aa4.2□□□□□ -1.74
VPS52-222ENST00000495981 RBMS1P29558 406 aaKnown RBP4.2□□□□□ -1.74
VPS52-222ENST00000495981 GRK5P34947 590 aa4.2□□□□□ -1.74
VPS52-222ENST00000495981 RABIFP47224 123 aa4.2□□□□□ -1.74
VPS52-222ENST00000495981 CCNHP51946 323 aaPredicted RBP4.2□□□□□ -1.74
VPS52-222ENST00000495981 CDH4P55283 916 aa4.2□□□□□ -1.74
VPS52-222ENST00000495981 E2F1Q01094 437 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms