RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 FBXO36Q8NEA4 188 aa31.75■■■□□ 2.67
CBX4-203ENST00000494546 SPATA4Q8NEY3 305 aa31.75■■■□□ 2.67
CBX4-203ENST00000494546 MCOLN3Q8TDD5 553 aa31.75■■■□□ 2.67
CBX4-203ENST00000494546 PTERQ96BW5 349 aa31.75■■■□□ 2.67
CBX4-203ENST00000494546 LINGO1Q96FE5 620 aa31.75■■■□□ 2.67
CBX4-203ENST00000494546 UTP6Q9NYH9 597 aaKnown RBP31.75■■■□□ 2.67
CBX4-203ENST00000494546 NDC80O14777 642 aa31.74■■■□□ 2.67
CBX4-203ENST00000494546 C8GP07360 202 aa31.74■■■□□ 2.67
CBX4-203ENST00000494546 CASRP41180 1078 aa31.74■■■□□ 2.67
CBX4-203ENST00000494546 OR1D4P47884 311 aa31.74■■■□□ 2.67
CBX4-203ENST00000494546 PGDP52209 483 aa31.74■■■□□ 2.67
CBX4-203ENST00000494546 HECTD2Q5U5R9 776 aa31.74■■■□□ 2.67
CBX4-203ENST00000494546 TMEM151BQ8IW70 566 aa31.74■■■□□ 2.67
CBX4-203ENST00000494546 BBOF1Q8ND07 529 aa31.74■■■□□ 2.67
CBX4-203ENST00000494546 FKBP10Q96AY3 582 aa31.74■■■□□ 2.67
CBX4-203ENST00000494546 DPH5Q9H2P9 285 aa31.74■■■□□ 2.67
CBX4-203ENST00000494546 STOX2Q9P2F5 926 aaPredicted RBP31.74■■■□□ 2.67
CBX4-203ENST00000494546 PDE10AQ9Y233 779 aa31.74■■■□□ 2.67
CBX4-203ENST00000494546 MAU2Q9Y6X3 613 aa31.74■■■□□ 2.67
CBX4-203ENST00000494546 A6NL46 340 aa31.73■■■□□ 2.67
CBX4-203ENST00000494546 H0YGG7 62 aa31.73■■■□□ 2.67
CBX4-203ENST00000494546 WISP1O95388 367 aa31.73■■■□□ 2.67
CBX4-203ENST00000494546 PGGT1BP53609 377 aa31.73■■■□□ 2.67
CBX4-203ENST00000494546 ARF3P61204 181 aaPredicted RBP31.73■■■□□ 2.67
CBX4-203ENST00000494546 ABATP80404 500 aa31.73■■■□□ 2.67
CBX4-203ENST00000494546 C2orf54Q08AI8 447 aa31.73■■■□□ 2.67
CBX4-203ENST00000494546 ZNF425Q6IV72 752 aa31.73■■■□□ 2.67
CBX4-203ENST00000494546 COX15Q7KZN9 410 aa31.73■■■□□ 2.67
CBX4-203ENST00000494546 OVCH1Q7RTY7 1134 aa31.73■■■□□ 2.67
CBX4-203ENST00000494546 CCDC138Q96M89 665 aa31.73■■■□□ 2.67
CBX4-203ENST00000494546 IP6K3Q96PC2 410 aa31.73■■■□□ 2.67
CBX4-203ENST00000494546 ZFATQ9P243 1243 aa31.73■■■□□ 2.67
CBX4-203ENST00000494546 CORO1CQ9ULV4 474 aaPredicted RBP31.73■■■□□ 2.67
CBX4-203ENST00000494546 PCDHGA9Q9Y5G4 932 aaKnown RBP31.73■■■□□ 2.67
CBX4-203ENST00000494546 FAM187AA6NFU0 413 aa31.72■■■□□ 2.67
CBX4-203ENST00000494546 PEX12O00623 359 aa31.72■■■□□ 2.67
CBX4-203ENST00000494546 MED26O95402 600 aa31.72■■■□□ 2.67
CBX4-203ENST00000494546 UMODP07911 640 aa31.72■■■□□ 2.67
CBX4-203ENST00000494546 ETF1P62495 437 aaKnown RBP31.72■■■□□ 2.67
CBX4-203ENST00000494546 SP140Q13342 867 aa31.72■■■□□ 2.67
CBX4-203ENST00000494546 FRG1Q14331 258 aaKnown RBP31.72■■■□□ 2.67
CBX4-203ENST00000494546 SYT10Q6XYQ8 523 aa31.72■■■□□ 2.67
CBX4-203ENST00000494546 PARVBQ9HBI1 364 aa31.72■■■□□ 2.67
CBX4-203ENST00000494546 CCDC177Q9NQR7 707 aaPredicted RBP31.72■■■□□ 2.67
CBX4-203ENST00000494546 VWA7Q9Y334 891 aa31.72■■■□□ 2.67
CBX4-203ENST00000494546 E7ESA3 106 aa31.71■■■□□ 2.67
CBX4-203ENST00000494546 ONECUT2O95948 504 aa31.71■■■□□ 2.67
CBX4-203ENST00000494546 ALBP02768 609 aa31.71■■■□□ 2.67
CBX4-203ENST00000494546 IL2P60568 153 aa31.71■■■□□ 2.67
CBX4-203ENST00000494546 MGAT5Q09328 741 aa31.71■■■□□ 2.67
CBX4-203ENST00000494546 FAM45BPQ6NSW5 357 aa31.71■■■□□ 2.67
CBX4-203ENST00000494546 MBOAT1Q6ZNC8 495 aa31.71■■■□□ 2.67
CBX4-203ENST00000494546 MAATS1Q7Z4T9 603 aa31.71■■■□□ 2.67
CBX4-203ENST00000494546 ZBED8Q8IZ13 594 aa31.71■■■□□ 2.67
CBX4-203ENST00000494546 FAM45AQ8TCE6 357 aa31.71■■■□□ 2.67
CBX4-203ENST00000494546 CABS1Q96KC9 395 aa31.71■■■□□ 2.67
CBX4-203ENST00000494546 OLFM1Q99784 485 aa31.71■■■□□ 2.67
CBX4-203ENST00000494546 ERP44Q9BS26 406 aa31.71■■■□□ 2.67
CBX4-203ENST00000494546 CUEDC1Q9NWM3 386 aaPredicted RBP31.71■■■□□ 2.67
CBX4-203ENST00000494546 G3BP2Q9UN86 482 aaKnown RBP31.71■■■□□ 2.67
CBX4-203ENST00000494546 PCSK5Q92824 1860 aa31.71■■■□□ 2.67
CBX4-203ENST00000494546 PCM1Q15154 2024 aa31.71■■■□□ 2.67
CBX4-203ENST00000494546 SLC16A5O15375 505 aa31.7■■■□□ 2.67
CBX4-203ENST00000494546 RAD51CO43502 376 aa31.7■■■□□ 2.67
CBX4-203ENST00000494546 EZRP15311 586 aaKnown RBP31.7■■■□□ 2.67
CBX4-203ENST00000494546 FDXRP22570 491 aa31.7■■■□□ 2.67
CBX4-203ENST00000494546 TBPL1P62380 186 aa31.7■■■□□ 2.67
CBX4-203ENST00000494546 KCNC4Q03721 635 aa31.7■■■□□ 2.67
CBX4-203ENST00000494546 CALCOCO2Q13137 446 aa31.7■■■□□ 2.67
CBX4-203ENST00000494546 NKG7Q16617 165 aa31.7■■■□□ 2.67
CBX4-203ENST00000494546 MUM1Q2TAK8 710 aa31.7■■■□□ 2.67
CBX4-203ENST00000494546 CSNK1A1LQ8N752 337 aa31.7■■■□□ 2.67
CBX4-203ENST00000494546 FDCSPQ8NFU4 85 aa31.7■■■□□ 2.67
CBX4-203ENST00000494546 COL26A1Q96A83 441 aa31.7■■■□□ 2.67
CBX4-203ENST00000494546 WDR54Q9H977 334 aa31.7■■■□□ 2.67
CBX4-203ENST00000494546 SYNPO2LQ9H987 977 aa31.7■■■□□ 2.67
CBX4-203ENST00000494546 P4HTMQ9NXG6 502 aa31.7■■■□□ 2.67
CBX4-203ENST00000494546 CTSFQ9UBX1 484 aa31.7■■■□□ 2.67
CBX4-203ENST00000494546 CCDC88CQ9P219 2028 aa31.7■■■□□ 2.66
CBX4-203ENST00000494546 H7BY64 318 aa31.69■■■□□ 2.66
CBX4-203ENST00000494546 CEACAM4O75871 244 aa31.69■■■□□ 2.66
CBX4-203ENST00000494546 CSRP3P50461 194 aa31.69■■■□□ 2.66
CBX4-203ENST00000494546 PHKG1Q16816 387 aa31.69■■■□□ 2.66
CBX4-203ENST00000494546 PRTGQ2VWP7 1150 aa31.69■■■□□ 2.66
CBX4-203ENST00000494546 PRAMEF13Q5VWM6 474 aa31.69■■■□□ 2.66
CBX4-203ENST00000494546 CAPN12Q6ZSI9 719 aa31.69■■■□□ 2.66
CBX4-203ENST00000494546 SHISA6Q6ZSJ9 500 aa31.69■■■□□ 2.66
CBX4-203ENST00000494546 PPP1R32Q7Z5V6 425 aa31.69■■■□□ 2.66
CBX4-203ENST00000494546 STRA8Q7Z7C7 330 aa31.69■■■□□ 2.66
CBX4-203ENST00000494546 RERGQ96A58 199 aaPredicted RBP31.69■■■□□ 2.66
CBX4-203ENST00000494546 ALKBH8Q96BT7 664 aaKnown RBP31.69■■■□□ 2.66
CBX4-203ENST00000494546 C10orf90Q96M02 699 aa31.69■■■□□ 2.66
CBX4-203ENST00000494546 FER1L6-AS2Q96M78 137 aa31.69■■■□□ 2.66
CBX4-203ENST00000494546 PRAP1Q96NZ9 151 aa31.69■■■□□ 2.66
CBX4-203ENST00000494546 OR2A5Q96R48 311 aa31.69■■■□□ 2.66
CBX4-203ENST00000494546 ATG10Q9H0Y0 220 aa31.69■■■□□ 2.66
CBX4-203ENST00000494546 SOX17Q9H6I2 414 aaPredicted RBP31.69■■■□□ 2.66
CBX4-203ENST00000494546 ZNF304Q9HCX3 659 aa31.69■■■□□ 2.66
CBX4-203ENST00000494546 MLXIPLQ9NP71 852 aa31.69■■■□□ 2.66
CBX4-203ENST00000494546 WHRNQ9P202 907 aa31.69■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms