RNA–Protein interactions for RNA: ENST00000494411.5

PCMT1-209, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

TSL 4

Gene PCMT1, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-209ENST00000494411 PAQR7Q86WK9 346 aa18.28■□□□□ 0.52
PCMT1-209ENST00000494411 CEP97Q8IW35 865 aa18.28■□□□□ 0.52
PCMT1-209ENST00000494411 OR4N4Q8N0Y3 316 aa18.28■□□□□ 0.52
PCMT1-209ENST00000494411 PDLIM5Q96HC4 596 aaKnown RBP18.28■□□□□ 0.52
PCMT1-209ENST00000494411 CPNE1Q99829 537 aa18.28■□□□□ 0.52
PCMT1-209ENST00000494411 ZFYVE21Q9BQ24 234 aa18.28■□□□□ 0.52
PCMT1-209ENST00000494411 PLCD4Q9BRC7 762 aa18.28■□□□□ 0.52
PCMT1-209ENST00000494411 LRRC4CQ9HCJ2 640 aa18.28■□□□□ 0.52
PCMT1-209ENST00000494411 CUEDC1Q9NWM3 386 aaPredicted RBP18.28■□□□□ 0.52
PCMT1-209ENST00000494411 ANKMY1Q9P2S6 941 aa18.28■□□□□ 0.52
PCMT1-209ENST00000494411 DMGDHQ9UI17 866 aaKnown RBP18.28■□□□□ 0.52
PCMT1-209ENST00000494411 SNX7Q9UNH6 387 aa18.28■□□□□ 0.52
PCMT1-209ENST00000494411 SRPX2O60687 465 aaPredicted RBP18.27■□□□□ 0.52
PCMT1-209ENST00000494411 HIST1H2AGP0C0S8 130 aaPredicted RBP18.27■□□□□ 0.52
PCMT1-209ENST00000494411 HIST1H2ADP20671 130 aa18.27■□□□□ 0.52
PCMT1-209ENST00000494411 POLE2P56282 527 aa18.27■□□□□ 0.52
PCMT1-209ENST00000494411 DCDP81605 110 aaKnown RBP18.27■□□□□ 0.52
PCMT1-209ENST00000494411 GRM7Q14831 915 aa18.27■□□□□ 0.52
PCMT1-209ENST00000494411 SLC9A5Q14940 896 aa18.27■□□□□ 0.52
PCMT1-209ENST00000494411 UGT8Q16880 541 aa18.27■□□□□ 0.52
PCMT1-209ENST00000494411 WASHC2DQ5SRD0 308 aa18.27■□□□□ 0.52
PCMT1-209ENST00000494411 PRAMEF13Q5VWM6 474 aa18.27■□□□□ 0.52
PCMT1-209ENST00000494411 ZNF425Q6IV72 752 aa18.27■□□□□ 0.52
PCMT1-209ENST00000494411 FBXO42Q6P3S6 717 aa18.27■□□□□ 0.52
PCMT1-209ENST00000494411 TTLL10Q6ZVT0 673 aa18.27■□□□□ 0.52
PCMT1-209ENST00000494411 CTAGE3PQ8IX95 158 aa18.27■□□□□ 0.52
PCMT1-209ENST00000494411 TTC29Q8NA56 475 aaPredicted RBP18.27■□□□□ 0.52
PCMT1-209ENST00000494411 HIST1H2AHQ96KK5 128 aa18.27■□□□□ 0.52
PCMT1-209ENST00000494411 RBBP8Q99708 897 aa18.27■□□□□ 0.52
PCMT1-209ENST00000494411 HIST1H2AJQ99878 128 aa18.27■□□□□ 0.52
PCMT1-209ENST00000494411 H2AFJQ9BTM1 129 aa18.27■□□□□ 0.52
PCMT1-209ENST00000494411 FAM117AQ9C073 453 aa18.27■□□□□ 0.52
PCMT1-209ENST00000494411 ATG10Q9H0Y0 220 aa18.27■□□□□ 0.52
PCMT1-209ENST00000494411 SYNPO2LQ9H987 977 aa18.27■□□□□ 0.52
PCMT1-209ENST00000494411 CAB39LQ9H9S4 337 aa18.27■□□□□ 0.52
PCMT1-209ENST00000494411 ENAMQ9NRM1 1142 aa18.27■□□□□ 0.52
PCMT1-209ENST00000494411 CUTCQ9NTM9 273 aa18.27■□□□□ 0.52
PCMT1-209ENST00000494411 ARL15Q9NXU5 204 aa18.27■□□□□ 0.52
PCMT1-209ENST00000494411 TCFL5Q9UL49 500 aa18.27■□□□□ 0.52
PCMT1-209ENST00000494411 POLHQ9Y253 713 aa18.27■□□□□ 0.52
PCMT1-209ENST00000494411 MTO1Q9Y2Z2 717 aaKnown RBP18.27■□□□□ 0.52
PCMT1-209ENST00000494411 GCN1Q92616 2671 aaKnown RBP18.26■□□□□ 0.51
PCMT1-209ENST00000494411 FITM1A5D6W6 292 aa18.26■□□□□ 0.51
PCMT1-209ENST00000494411 PABPN1LA6NDY0 278 aaKnown RBP18.26■□□□□ 0.51
PCMT1-209ENST00000494411 NPEPPSL1A6NEC2 478 aa18.26■□□□□ 0.51
PCMT1-209ENST00000494411 EIF2S1P05198 315 aaKnown RBP18.26■□□□□ 0.51
PCMT1-209ENST00000494411 ALAS2P22557 587 aa18.26■□□□□ 0.51
PCMT1-209ENST00000494411 STX2P32856 288 aa18.26■□□□□ 0.51
PCMT1-209ENST00000494411 GP5P40197 560 aa18.26■□□□□ 0.51
PCMT1-209ENST00000494411 ARSFP54793 590 aa18.26■□□□□ 0.51
PCMT1-209ENST00000494411 SLC12A2P55011 1212 aa18.26■□□□□ 0.51
PCMT1-209ENST00000494411 AP1S2P56377 157 aa18.26■□□□□ 0.51
PCMT1-209ENST00000494411 ILF2Q12905 390 aaKnown RBP18.26■□□□□ 0.51
PCMT1-209ENST00000494411 NAE1Q13564 534 aa18.26■□□□□ 0.51
PCMT1-209ENST00000494411 KBTBD12Q3ZCT8 623 aa18.26■□□□□ 0.51
PCMT1-209ENST00000494411 NKAIN1Q4KMZ8 207 aa18.26■□□□□ 0.51
PCMT1-209ENST00000494411 SBSNQ6UWP8 590 aa18.26■□□□□ 0.51
PCMT1-209ENST00000494411 ADCK2Q7Z695 626 aa18.26■□□□□ 0.51
PCMT1-209ENST00000494411 ZNF843Q8N446 348 aa18.26■□□□□ 0.51
PCMT1-209ENST00000494411 NKAPQ8N5F7 415 aaKnown RBP18.26■□□□□ 0.51
PCMT1-209ENST00000494411 PPM1NQ8N819 430 aa18.26■□□□□ 0.51
PCMT1-209ENST00000494411 FBF1Q8TES7 1133 aa18.26■□□□□ 0.51
PCMT1-209ENST00000494411 ANKRD49Q8WVL7 239 aa18.26■□□□□ 0.51
PCMT1-209ENST00000494411 ALKBH8Q96BT7 664 aaKnown RBP18.26■□□□□ 0.51
PCMT1-209ENST00000494411 C17orf62Q9BQA9 187 aa18.26■□□□□ 0.51
PCMT1-209ENST00000494411 TRIM54Q9BYV2 358 aa18.26■□□□□ 0.51
PCMT1-209ENST00000494411 POPDC3Q9HBV1 291 aa18.26■□□□□ 0.51
PCMT1-209ENST00000494411 GPAMQ9HCL2 828 aa18.26■□□□□ 0.51
PCMT1-209ENST00000494411 NDOR1Q9UHB4 597 aa18.26■□□□□ 0.51
PCMT1-209ENST00000494411 SH2B3Q9UQQ2 575 aa18.26■□□□□ 0.51
PCMT1-209ENST00000494411 A0A1B0GX78 115 aa18.25■□□□□ 0.51
PCMT1-209ENST00000494411 H0YGG7 62 aa18.25■□□□□ 0.51
PCMT1-209ENST00000494411 CDC7O00311 574 aa18.25■□□□□ 0.51
PCMT1-209ENST00000494411 HAT1O14929 419 aa18.25■□□□□ 0.51
PCMT1-209ENST00000494411 DSCR3O14972 297 aa18.25■□□□□ 0.51
PCMT1-209ENST00000494411 ENO2P09104 434 aaPredicted RBP18.25■□□□□ 0.51
PCMT1-209ENST00000494411 EZRP15311 586 aaKnown RBP18.25■□□□□ 0.51
PCMT1-209ENST00000494411 ITGAXP20702 1163 aa18.25■□□□□ 0.51
PCMT1-209ENST00000494411 ARF3P61204 181 aaPredicted RBP18.25■□□□□ 0.51
PCMT1-209ENST00000494411 POU4F1Q01851 419 aa18.25■□□□□ 0.51
PCMT1-209ENST00000494411 EFTUD2Q15029 972 aaKnown RBP eCLIP18.25■□□□□ 0.51
PCMT1-209ENST00000494411 PPP1R3AQ16821 1122 aa18.25■□□□□ 0.51
PCMT1-209ENST00000494411 ZXDCQ2QGD7 858 aaPredicted RBP18.25■□□□□ 0.51
PCMT1-209ENST00000494411 YOD1Q5VVQ6 348 aaPredicted RBP18.25■□□□□ 0.51
PCMT1-209ENST00000494411 MLIPQ5VWP3 458 aa18.25■□□□□ 0.51
PCMT1-209ENST00000494411 PLD3Q8IV08 490 aa18.25■□□□□ 0.51
PCMT1-209ENST00000494411 APOBEC4Q8WW27 367 aaKnown RBP18.25■□□□□ 0.51
PCMT1-209ENST00000494411 TSPAN17Q96FV3 270 aa18.25■□□□□ 0.51
PCMT1-209ENST00000494411 GPR22Q99680 433 aa18.25■□□□□ 0.51
PCMT1-209ENST00000494411 SGPP1Q9BX95 441 aa18.25■□□□□ 0.51
PCMT1-209ENST00000494411 PCBD2Q9H0N5 130 aa18.25■□□□□ 0.51
PCMT1-209ENST00000494411 UTP6Q9NYH9 597 aaKnown RBP18.25■□□□□ 0.51
PCMT1-209ENST00000494411 IFT80Q9P2H3 777 aaPredicted RBP18.25■□□□□ 0.51
PCMT1-209ENST00000494411 GPN3Q9UHW5 284 aaPredicted RBP18.25■□□□□ 0.51
PCMT1-209ENST00000494411 MAN2B2Q9Y2E5 1009 aa18.25■□□□□ 0.51
PCMT1-209ENST00000494411 PADI2Q9Y2J8 665 aa18.25■□□□□ 0.51
PCMT1-209ENST00000494411 KCNMB2Q9Y691 235 aa18.25■□□□□ 0.51
PCMT1-209ENST00000494411 MED13Q9UHV7 2174 aa18.25■□□□□ 0.51
PCMT1-209ENST00000494411 HELZ2Q9BYK8 2649 aaKnown RBP18.24■□□□□ 0.51
PCMT1-209ENST00000494411 HYKKA2RU49 373 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms