RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-211	ENST00000493957		A0A087WUV0	522 aa	Predicted RBP	11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	LOC105369274	A0A096LPK9	316 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	LOC102723532	A0A0G2JNH3	316 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957		A0A0J9YVX5	310 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	NCF1B	A6NI72	391 aa	Predicted RBP	11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	NCF1C	A8MVU1	366 aa	Predicted RBP	11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	TERT	O14746	1132 aa	Known RBP	11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	HAT1	O14929	419 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	RIPK2	O43353	540 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	ZNF749	O43361	778 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	OR2B3	O76000	313 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	MED26	O95402	600 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	STATH	P02808	62 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	ALDOA	P04075	364 aa	Known RBP	11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	NCF1	P14598	390 aa	Predicted RBP	11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	HSD17B2	P37059	387 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	STAT5A	P42229	794 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	KCNC1	P48547	511 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	ATP1A2	P50993	1020 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	PMS2	P54278	862 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	VSNL1	P62760	191 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	SNRPN	P63162	240 aa	Known RBP	11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	PRDX1	Q06830	199 aa	Known RBP	11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	PTCHD3	Q3KNS1	767 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	FAM69B	Q5VUD6	431 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	BROX	Q5VW32	411 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	ZNF425	Q6IV72	752 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	RAPH1	Q70E73	1250 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	RNF44	Q7L0R7	432 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	PAQR7	Q86WK9	346 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	PLD3	Q8IV08	490 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	MCAT	Q8IVS2	390 aa	Known RBP	11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	CENPL	Q8N0S6	344 aa	Predicted RBP	11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	OR4N4	Q8N0Y3	316 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	ZNF655	Q8N720	491 aa	Predicted RBP	11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	OR8K5	Q8NH50	307 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	CT55	Q8WUE5	264 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	N4BP2L2	Q92802	583 aa	Predicted RBP	11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	EXT2	Q93063	718 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	FBXL8	Q96CD0	374 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	UBXN10	Q96LJ8	280 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	PLCD4	Q9BRC7	762 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	SGPP1	Q9BX95	441 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	CHRNA10	Q9GZZ6	450 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	PRORY	Q9H606	182 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	SNX15	Q9NRS6	342 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	PCMTD2	Q9NV79	361 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	INTS7	Q9NVH2	962 aa	Known RBP	11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	CROT	Q9UKG9	612 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	NOVA2	Q9UNW9	492 aa	Known RBP	11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	PLCL2	Q9UPR0	1127 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	OARD1	Q9Y530	152 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	KLK4	Q9Y5K2	254 aa		11.17	□□□□□ -0.62
UBA3-211	ENST00000493957	ATRX	P46100	2492 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	ATM	Q13315	3056 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	ZNF839	A8K0R7	811 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957		E7EQ34	232 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	C3orf80	F5H4A9	247 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	MAP3K7	O43318	606 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	CPNE3	O75131	537 aa	Known RBP	11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	SLU7	O95391	586 aa	Known RBP	11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	C2	P06681	752 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	INHBA	P08476	426 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	ABHD2	P08910	425 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	ENO2	P09104	434 aa	Predicted RBP	11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	CDH1	P12830	882 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	HIST1H2AD	P20671	130 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	TNFRSF8	P28908	595 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	RORA	P35398	523 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	GCGR	P47871	477 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	AP1S2	P56377	157 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	TMPRSS3	P57727	454 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	FOXL2	P58012	376 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	VSX2	P58304	361 aa	Predicted RBP	11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	CYP4F2	P78329	520 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	MAP7	Q14244	749 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	SLC29A2	Q14542	456 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	ATP1A1-AS1	Q5TC04	95 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	C1orf189	Q5VU69	101 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	ZNF385C	Q66K41	422 aa	Predicted RBP	11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	FBXO42	Q6P3S6	717 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	CYB5D1	Q6P9G0	228 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	CCDC81	Q6ZN84	652 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	TRMT10C	Q7L0Y3	403 aa	Known RBP	11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	BPHL	Q86WA6	291 aa	Predicted RBP	11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	TMEM151B	Q8IW70	566 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	ESX1	Q8N693	406 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	OR56A3	Q8NH54	315 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	ZUFSP	Q96AP4	578 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	NXNL1	Q96CM4	212 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	CLIP3	Q96DZ5	547 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	HIST1H2AH	Q96KK5	128 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	HIST1H2AJ	Q99878	128 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	TMEM79	Q9BSE2	394 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	H2AFJ	Q9BTM1	129 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	DHRS4	Q9BTZ2	278 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	ALG9	Q9H6U8	611 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	ACTR5	Q9H9F9	607 aa	Predicted RBP	11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	LHX9	Q9NQ69	397 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms