RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 USP53Q70EK8 1073 aa14.37□□□□□ -0.11
ACTB-213ENST00000493945 GOLGA7Q7Z5G4 137 aa14.37□□□□□ -0.11
ACTB-213ENST00000493945 MYLK4Q86YV6 388 aaPredicted RBP14.37□□□□□ -0.11
ACTB-213ENST00000493945 LRRC56Q8IYG6 542 aaPredicted RBP14.37□□□□□ -0.11
ACTB-213ENST00000493945 TMEM151AQ8N4L1 468 aa14.37□□□□□ -0.11
ACTB-213ENST00000493945 C19orf47Q8N9M1 422 aaKnown RBP14.37□□□□□ -0.11
ACTB-213ENST00000493945 OR2A1Q8NGT9 310 aa14.37□□□□□ -0.11
ACTB-213ENST00000493945 LRRC8CQ8TDW0 803 aa14.37□□□□□ -0.11
ACTB-213ENST00000493945 ZNF483Q8TF39 744 aaPredicted RBP14.37□□□□□ -0.11
ACTB-213ENST00000493945 SEC16BQ96JE7 1060 aa14.37□□□□□ -0.11
ACTB-213ENST00000493945 TMEM237Q96Q45 408 aa14.37□□□□□ -0.11
ACTB-213ENST00000493945 NLNQ9BYT8 704 aa14.37□□□□□ -0.11
ACTB-213ENST00000493945 CHRNA10Q9GZZ6 450 aa14.37□□□□□ -0.11
ACTB-213ENST00000493945 IPPKQ9H8X2 491 aa14.37□□□□□ -0.11
ACTB-213ENST00000493945 SPHK1Q9NYA1 384 aa14.37□□□□□ -0.11
ACTB-213ENST00000493945 OGFRQ9NZT2 677 aa14.37□□□□□ -0.11
ACTB-213ENST00000493945 KLHL3Q9UH77 587 aa14.37□□□□□ -0.11
ACTB-213ENST00000493945 PCTPQ9UKL6 214 aa14.37□□□□□ -0.11
ACTB-213ENST00000493945 A0A1W2PPV9 198 aa14.36□□□□□ -0.11
ACTB-213ENST00000493945 A0A1W2PQM1 296 aa14.36□□□□□ -0.11
ACTB-213ENST00000493945 KRT87PA6NCN2 255 aa14.36□□□□□ -0.11
ACTB-213ENST00000493945 E2F3O00716 465 aa14.36□□□□□ -0.11
ACTB-213ENST00000493945 SIX3O95343 332 aaPredicted RBP14.36□□□□□ -0.11
ACTB-213ENST00000493945 CHEK2O96017 543 aa14.36□□□□□ -0.11
ACTB-213ENST00000493945 ENO1P06733 434 aaKnown RBP14.36□□□□□ -0.11
ACTB-213ENST00000493945 SBK3P0C264 359 aa14.36□□□□□ -0.11
ACTB-213ENST00000493945 EBLN1P0CF75 366 aa14.36□□□□□ -0.11
ACTB-213ENST00000493945 THRAP10827 490 aa14.36□□□□□ -0.11
ACTB-213ENST00000493945 CHN1P15882 459 aa14.36□□□□□ -0.11
ACTB-213ENST00000493945 CCKBRP32239 447 aa14.36□□□□□ -0.11
ACTB-213ENST00000493945 CSF2RBP32927 897 aa14.36□□□□□ -0.11
ACTB-213ENST00000493945 AGTR2P50052 363 aa14.36□□□□□ -0.11
ACTB-213ENST00000493945 GFERP55789 205 aa14.36□□□□□ -0.11
ACTB-213ENST00000493945 RPS15AP62244 130 aaKnown RBP14.36□□□□□ -0.11
ACTB-213ENST00000493945 HSD11B2P80365 405 aa14.36□□□□□ -0.11
ACTB-213ENST00000493945 ACY1Q03154 408 aa14.36□□□□□ -0.11
ACTB-213ENST00000493945 RELAQ04206 551 aa14.36□□□□□ -0.11
ACTB-213ENST00000493945 GALNT1Q10472 559 aaPredicted RBP14.36□□□□□ -0.11
ACTB-213ENST00000493945 RCN2Q14257 317 aa14.36□□□□□ -0.11
ACTB-213ENST00000493945 TBCCQ15814 346 aa14.36□□□□□ -0.11
ACTB-213ENST00000493945 SNAP47Q5SQN1 464 aa14.36□□□□□ -0.11
ACTB-213ENST00000493945 LIPJQ5W064 366 aa14.36□□□□□ -0.11
ACTB-213ENST00000493945 ATG9BQ674R7 924 aa14.36□□□□□ -0.11
ACTB-213ENST00000493945 FRMD7Q6ZUT3 714 aa14.36□□□□□ -0.11
ACTB-213ENST00000493945 RERGQ96A58 199 aaPredicted RBP14.36□□□□□ -0.11
ACTB-213ENST00000493945 THAP11Q96EK4 314 aa14.36□□□□□ -0.11
ACTB-213ENST00000493945 ZNF382Q96SR6 550 aa14.36□□□□□ -0.11
ACTB-213ENST00000493945 CMKLR1Q99788 373 aa14.36□□□□□ -0.11
ACTB-213ENST00000493945 NUDT22Q9BRQ3 303 aa14.36□□□□□ -0.11
ACTB-213ENST00000493945 DPH7Q9BTV6 452 aa14.36□□□□□ -0.11
ACTB-213ENST00000493945 ZNF768Q9H5H4 540 aaKnown RBP14.36□□□□□ -0.11
ACTB-213ENST00000493945 SEMA4BQ9NPR2 832 aaPredicted RBP14.36□□□□□ -0.11
ACTB-213ENST00000493945 ADGRE2Q9UHX3 823 aa14.36□□□□□ -0.11
ACTB-213ENST00000493945 ATXN7L1Q9ULK2 861 aaPredicted RBP14.36□□□□□ -0.11
ACTB-213ENST00000493945 KLK4Q9Y5K2 254 aa14.36□□□□□ -0.11
ACTB-213ENST00000493945 USP34Q70CQ2 3546 aa14.36□□□□□ -0.11
ACTB-213ENST00000493945 HEATR5BQ9P2D3 2071 aa14.35□□□□□ -0.11
ACTB-213ENST00000493945 PIEZO1Q92508 2521 aa14.35□□□□□ -0.11
ACTB-213ENST00000493945 WDR91A4D1P6 747 aa14.35□□□□□ -0.11
ACTB-213ENST00000493945 TXNDC9O14530 226 aa14.35□□□□□ -0.11
ACTB-213ENST00000493945 PRICKLE3O43900 615 aaPredicted RBP14.35□□□□□ -0.11
ACTB-213ENST00000493945 KCNK5O95279 499 aa14.35□□□□□ -0.11
ACTB-213ENST00000493945 CLDN9O95484 217 aa14.35□□□□□ -0.11
ACTB-213ENST00000493945 HSPA4LO95757 839 aa14.35□□□□□ -0.11
ACTB-213ENST00000493945 C1GALT1C1LP0DN25 315 aa14.35□□□□□ -0.11
ACTB-213ENST00000493945 CDH1P12830 882 aa14.35□□□□□ -0.11
ACTB-213ENST00000493945 NPPBP16860 134 aa14.35□□□□□ -0.11
ACTB-213ENST00000493945 MAGP20916 626 aa14.35□□□□□ -0.11
ACTB-213ENST00000493945 PSMB5P28074 263 aa14.35□□□□□ -0.11
ACTB-213ENST00000493945 PEBP1P30086 187 aaKnown RBP14.35□□□□□ -0.11
ACTB-213ENST00000493945 GDF5P43026 501 aa14.35□□□□□ -0.11
ACTB-213ENST00000493945 CHIT1Q13231 466 aa14.35□□□□□ -0.11
ACTB-213ENST00000493945 PUM1Q14671 1186 aaKnown RBP eCLIP14.35□□□□□ -0.113e-35■□□□□ 10
ACTB-213ENST00000493945 CHI3L2Q15782 390 aa14.35□□□□□ -0.11
ACTB-213ENST00000493945 TTC19Q6DKK2 380 aaPredicted RBP14.35□□□□□ -0.11
ACTB-213ENST00000493945 FIGLAQ6QHK4 219 aa14.35□□□□□ -0.11
ACTB-213ENST00000493945 NXPE4Q6UWF7 544 aa14.35□□□□□ -0.11
ACTB-213ENST00000493945 GPRIN3Q6ZVF9 776 aa14.35□□□□□ -0.11
ACTB-213ENST00000493945 MILR1Q7Z6M3 343 aa14.35□□□□□ -0.11
ACTB-213ENST00000493945 MTERF4Q7Z6M4 381 aaKnown RBP14.35□□□□□ -0.11
ACTB-213ENST00000493945 TMPRSS12Q86WS5 348 aa14.35□□□□□ -0.11
ACTB-213ENST00000493945 SPNS2Q8IVW8 549 aa14.35□□□□□ -0.11
ACTB-213ENST00000493945 CACTIN-AS1Q8N1I8 211 aa14.35□□□□□ -0.11
ACTB-213ENST00000493945 AGBL5Q8NDL9 886 aa14.35□□□□□ -0.11
ACTB-213ENST00000493945 ABHD11Q8NFV4 315 aa14.35□□□□□ -0.11
ACTB-213ENST00000493945 NEIL2Q969S2 332 aa14.35□□□□□ -0.11
ACTB-213ENST00000493945 CCDC74BQ96LY2 380 aa14.35□□□□□ -0.11
ACTB-213ENST00000493945 MAP3K3Q99759 626 aa14.35□□□□□ -0.11
ACTB-213ENST00000493945 PLCD4Q9BRC7 762 aa14.35□□□□□ -0.11
ACTB-213ENST00000493945 CENPKQ9BS16 269 aa14.35□□□□□ -0.11
ACTB-213ENST00000493945 NTMT1Q9BV86 223 aa14.35□□□□□ -0.11
ACTB-213ENST00000493945 TWSG1Q9GZX9 223 aa14.35□□□□□ -0.11
ACTB-213ENST00000493945 NOL11Q9H8H0 719 aaKnown RBP14.35□□□□□ -0.11
ACTB-213ENST00000493945 MLXIPLQ9NP71 852 aa14.35□□□□□ -0.11
ACTB-213ENST00000493945 PDP2Q9P2J9 529 aa14.35□□□□□ -0.11
ACTB-213ENST00000493945 SNX6Q9UNH7 406 aa14.35□□□□□ -0.11
ACTB-213ENST00000493945 CLCA2Q9UQC9 943 aa14.35□□□□□ -0.11
ACTB-213ENST00000493945 BTRCQ9Y297 605 aa14.35□□□□□ -0.11
ACTB-213ENST00000493945 PCDHGA11Q9Y5H2 935 aa14.35□□□□□ -0.11
ACTB-213ENST00000493945 SPAARA0A1B0GVQ0 90 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms