RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 FBXO42Q6P3S6 717 aa20.4■□□□□ 0.86
PFDN4-205ENST00000493356 GSDMBQ8TAX9 411 aa20.4■□□□□ 0.86
PFDN4-205ENST00000493356 IGSF5Q9NSI5 407 aa20.4■□□□□ 0.86
PFDN4-205ENST00000493356 C14orf105Q9NVL8 296 aa20.4■□□□□ 0.86
PFDN4-205ENST00000493356 CDC14AQ9UNH5 594 aa20.4■□□□□ 0.86
PFDN4-205ENST00000493356 AKAP9Q99996 3911 aa20.39■□□□□ 0.86
PFDN4-205ENST00000493356 LOC102723996A0A087X1L8 192 aa20.39■□□□□ 0.85
PFDN4-205ENST00000493356 H0YGG7 62 aa20.39■□□□□ 0.85
PFDN4-205ENST00000493356 ITGAMP11215 1152 aa20.39■□□□□ 0.85
PFDN4-205ENST00000493356 CYLC1P35663 651 aaPredicted RBP20.39■□□□□ 0.85
PFDN4-205ENST00000493356 ARF3P61204 181 aaPredicted RBP20.39■□□□□ 0.85
PFDN4-205ENST00000493356 AARS2Q5JTZ9 985 aaKnown RBP20.39■□□□□ 0.85
PFDN4-205ENST00000493356 PTRHD1Q6GMV3 140 aaKnown RBP20.39■□□□□ 0.85
PFDN4-205ENST00000493356 PPP1R21Q6ZMI0 780 aa20.39■□□□□ 0.85
PFDN4-205ENST00000493356 AMER2Q8N7J2 671 aa20.39■□□□□ 0.85
PFDN4-205ENST00000493356 LRRC57Q8N9N7 239 aa20.39■□□□□ 0.85
PFDN4-205ENST00000493356 SKA2Q8WVK7 121 aaPredicted RBP20.39■□□□□ 0.85
PFDN4-205ENST00000493356 MVB12AQ96EY5 273 aa20.39■□□□□ 0.85
PFDN4-205ENST00000493356 MRFAP1L1Q96HT8 127 aa20.39■□□□□ 0.85
PFDN4-205ENST00000493356 DPH7Q9BTV6 452 aa20.39■□□□□ 0.85
PFDN4-205ENST00000493356 YIPF2Q9BWQ6 316 aa20.39■□□□□ 0.85
PFDN4-205ENST00000493356 MARCH4Q9P2E8 410 aaPredicted RBP20.39■□□□□ 0.85
PFDN4-205ENST00000493356 TCAF1Q9Y4C2 921 aa20.39■□□□□ 0.85
PFDN4-205ENST00000493356 MRFAP1Q9Y605 127 aa20.39■□□□□ 0.85
PFDN4-205ENST00000493356 HEATR5BQ9P2D3 2071 aa20.39■□□□□ 0.85
PFDN4-205ENST00000493356 CACNA1CQ13936 2221 aa20.38■□□□□ 0.85
PFDN4-205ENST00000493356 OR5H15A6NDH6 313 aa20.38■□□□□ 0.85
PFDN4-205ENST00000493356 PRPF4O43172 522 aaKnown RBP eCLIP20.38■□□□□ 0.85
PFDN4-205ENST00000493356 PRAMEF2O60811 474 aa20.38■□□□□ 0.85
PFDN4-205ENST00000493356 SUN1O94901 812 aa20.38■□□□□ 0.85
PFDN4-205ENST00000493356 HEXBP07686 556 aa20.38■□□□□ 0.85
PFDN4-205ENST00000493356 RBPJQ06330 500 aa20.38■□□□□ 0.85
PFDN4-205ENST00000493356 FASTKQ14296 549 aaKnown RBP20.38■□□□□ 0.85
PFDN4-205ENST00000493356 NAA25Q14CX7 972 aa20.38■□□□□ 0.85
PFDN4-205ENST00000493356 PCOLCEQ15113 449 aa20.38■□□□□ 0.85
PFDN4-205ENST00000493356 XKRXQ6PP77 449 aa20.38■□□□□ 0.85
PFDN4-205ENST00000493356 AMER3Q8N944 861 aa20.38■□□□□ 0.85
PFDN4-205ENST00000493356 SUN3Q8TAQ9 357 aa20.38■□□□□ 0.85
PFDN4-205ENST00000493356 PEX13Q92968 403 aa20.38■□□□□ 0.85
PFDN4-205ENST00000493356 PANX3Q96QZ0 392 aa20.38■□□□□ 0.85
PFDN4-205ENST00000493356 ACAT2Q9BWD1 397 aa20.38■□□□□ 0.85
PFDN4-205ENST00000493356 ZNF700Q9H0M5 742 aa20.38■□□□□ 0.85
PFDN4-205ENST00000493356 P2RY12Q9H244 342 aa20.38■□□□□ 0.85
PFDN4-205ENST00000493356 SYNPO2LQ9H987 977 aa20.38■□□□□ 0.85
PFDN4-205ENST00000493356 ETNK1Q9HBU6 452 aa20.38■□□□□ 0.85
PFDN4-205ENST00000493356 CATSPERZQ9NTU4 200 aa20.38■□□□□ 0.85
PFDN4-205ENST00000493356 ANAPC5Q9UJX4 755 aa20.38■□□□□ 0.85
PFDN4-205ENST00000493356 RUVBL1Q9Y265 456 aaKnown RBP20.38■□□□□ 0.85
PFDN4-205ENST00000493356 MTORP42345 2549 aa20.38■□□□□ 0.85
PFDN4-205ENST00000493356 NF1P21359 2839 aa20.37■□□□□ 0.85
PFDN4-205ENST00000493356 GRID2IPA4D2P6 1211 aa20.37■□□□□ 0.85
PFDN4-205ENST00000493356 SLC19A2O60779 497 aa20.37■□□□□ 0.85
PFDN4-205ENST00000493356 WISP2O76076 250 aa20.37■□□□□ 0.85
PFDN4-205ENST00000493356 CMPK1P30085 196 aa20.37■□□□□ 0.85
PFDN4-205ENST00000493356 SLC26A3P40879 764 aa20.37■□□□□ 0.85
PFDN4-205ENST00000493356 CCNFP41002 786 aa20.37■□□□□ 0.85
PFDN4-205ENST00000493356 TTPAP49638 278 aa20.37■□□□□ 0.85
PFDN4-205ENST00000493356 ADORA2A-AS1P86434 159 aa20.37■□□□□ 0.85
PFDN4-205ENST00000493356 PMP22Q01453 160 aa20.37■□□□□ 0.85
PFDN4-205ENST00000493356 ABHD17BQ5VST6 288 aa20.37■□□□□ 0.85
PFDN4-205ENST00000493356 OTOAQ7RTW8 1153 aa20.37■□□□□ 0.85
PFDN4-205ENST00000493356 ZNF295-AS1Q8N0V1 137 aa20.37■□□□□ 0.85
PFDN4-205ENST00000493356 CSNK1A1LQ8N752 337 aa20.37■□□□□ 0.85
PFDN4-205ENST00000493356 TGIF2Q9GZN2 237 aa20.37■□□□□ 0.85
PFDN4-205ENST00000493356 MKKSQ9NPJ1 570 aaPredicted RBP20.37■□□□□ 0.85
PFDN4-205ENST00000493356 SPATA7Q9P0W8 599 aa20.37■□□□□ 0.85
PFDN4-205ENST00000493356 GNPTGQ9UJJ9 305 aa20.37■□□□□ 0.85
PFDN4-205ENST00000493356 MED13LQ71F56 2210 aa20.37■□□□□ 0.85
PFDN4-205ENST00000493356 SCN2AQ99250 2005 aa20.36■□□□□ 0.85
PFDN4-205ENST00000493356 TCRBV7S2A1N4TA0A589 114 aa20.36■□□□□ 0.85
PFDN4-205ENST00000493356 BTNL10A8MVZ5 291 aa20.36■□□□□ 0.85
PFDN4-205ENST00000493356 KPNA5O15131 536 aa20.36■□□□□ 0.85
PFDN4-205ENST00000493356 KRT38O76015 456 aa20.36■□□□□ 0.85
PFDN4-205ENST00000493356 MYBL2P10244 700 aa20.36■□□□□ 0.85
PFDN4-205ENST00000493356 ICAM2P13598 275 aa20.36■□□□□ 0.85
PFDN4-205ENST00000493356 EFNA3P52797 238 aa20.36■□□□□ 0.85
PFDN4-205ENST00000493356 AP2B1P63010 937 aa20.36■□□□□ 0.85
PFDN4-205ENST00000493356 HKDC1Q2TB90 917 aa20.36■□□□□ 0.85
PFDN4-205ENST00000493356 TMEM205Q6UW68 189 aa20.36■□□□□ 0.85
PFDN4-205ENST00000493356 MMABQ96EY8 250 aaPredicted RBP20.36■□□□□ 0.85
PFDN4-205ENST00000493356 IMMP1LQ96LU5 166 aa20.36■□□□□ 0.85
PFDN4-205ENST00000493356 FOPNLQ96NB1 174 aa20.36■□□□□ 0.85
PFDN4-205ENST00000493356 ITGB1BP2Q9UKP3 347 aa20.36■□□□□ 0.85
PFDN4-205ENST00000493356 EPN1Q9Y6I3 576 aaPredicted RBP20.36■□□□□ 0.85
PFDN4-205ENST00000493356 CD3EAPO15446 510 aaKnown RBP20.35■□□□□ 0.85
PFDN4-205ENST00000493356 PHF2O75151 1096 aa20.35■□□□□ 0.85
PFDN4-205ENST00000493356 VPS26AO75436 327 aa20.35■□□□□ 0.85
PFDN4-205ENST00000493356 CASP6P55212 293 aa20.35■□□□□ 0.85
PFDN4-205ENST00000493356 ZNF33BQ06732 778 aa20.35■□□□□ 0.85
PFDN4-205ENST00000493356 C3AR1Q16581 482 aa20.35■□□□□ 0.85
PFDN4-205ENST00000493356 NEK10Q6ZWH5 1172 aa20.35■□□□□ 0.85
PFDN4-205ENST00000493356 ZC3H7AQ8IWR0 971 aaKnown RBP20.35■□□□□ 0.85
PFDN4-205ENST00000493356 ARHGEF39Q8N4T4 335 aa20.35■□□□□ 0.85
PFDN4-205ENST00000493356 RNF214Q8ND24 703 aa20.35■□□□□ 0.85
PFDN4-205ENST00000493356 MAGEC3Q8TD91 643 aa20.35■□□□□ 0.85
PFDN4-205ENST00000493356 PLCD4Q9BRC7 762 aa20.35■□□□□ 0.85
PFDN4-205ENST00000493356 TUBB6Q9BUF5 446 aa20.35■□□□□ 0.85
PFDN4-205ENST00000493356 LACRTQ9GZZ8 138 aa20.35■□□□□ 0.85
PFDN4-205ENST00000493356 STMN3Q9NZ72 180 aa20.35■□□□□ 0.85
PFDN4-205ENST00000493356 IGKV1-8A0A0C4DH67 115 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms