RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 LIPMQ5VYY2 423 aa16.56■□□□□ 0.24
LIME1-208ENST00000493265 KIAA1614Q5VZ46 1190 aa16.56■□□□□ 0.24
LIME1-208ENST00000493265 TMEM71Q6P5X7 295 aa16.56■□□□□ 0.24
LIME1-208ENST00000493265 WDR74Q6RFH5 385 aaPredicted RBP16.56■□□□□ 0.24
LIME1-208ENST00000493265 ZCCHC23Q6ZST2 131 aa16.56■□□□□ 0.24
LIME1-208ENST00000493265 LRRC70Q7Z2Q7 622 aa16.56■□□□□ 0.24
LIME1-208ENST00000493265 ADCK2Q7Z695 626 aa16.56■□□□□ 0.24
LIME1-208ENST00000493265 C17orf64Q86WR6 236 aa16.56■□□□□ 0.24
LIME1-208ENST00000493265 OR2L3Q8NG85 312 aa16.56■□□□□ 0.24
LIME1-208ENST00000493265 PPP1R14CQ8TAE6 165 aa16.56■□□□□ 0.24
LIME1-208ENST00000493265 FLVCR1-AS1Q8TAF5 88 aa16.56■□□□□ 0.24
LIME1-208ENST00000493265 SREK1Q8WXA9 508 aaKnown RBP16.56■□□□□ 0.24
LIME1-208ENST00000493265 ERVK-6Q9BXR3 956 aa16.56■□□□□ 0.24
LIME1-208ENST00000493265 PITPNM3Q9BZ71 974 aa16.56■□□□□ 0.24
LIME1-208ENST00000493265 SEMA6CQ9H3T2 930 aa16.56■□□□□ 0.24
LIME1-208ENST00000493265 MRPS30Q9NP92 439 aaKnown RBP16.56■□□□□ 0.24
LIME1-208ENST00000493265 CUEDC1Q9NWM3 386 aaPredicted RBP16.56■□□□□ 0.24
LIME1-208ENST00000493265 RP1P56715 2156 aa16.55■□□□□ 0.24
LIME1-208ENST00000493265 ACACAQ13085 2346 aa16.55■□□□□ 0.24
LIME1-208ENST00000493265 A0A0J9YY10 115 aa16.55■□□□□ 0.24
LIME1-208ENST00000493265 SLC9B1P1A6NJY1 282 aa16.55■□□□□ 0.24
LIME1-208ENST00000493265 D6RAR5 112 aa16.55■□□□□ 0.24
LIME1-208ENST00000493265 TRIM13O60858 407 aa16.55■□□□□ 0.24
LIME1-208ENST00000493265 CHN1P15882 459 aa16.55■□□□□ 0.24
LIME1-208ENST00000493265 EPB42P16452 691 aa16.55■□□□□ 0.24
LIME1-208ENST00000493265 IMPDH1P20839 514 aa16.55■□□□□ 0.24
LIME1-208ENST00000493265 CDH13P55290 713 aa16.55■□□□□ 0.24
LIME1-208ENST00000493265 CDC16Q13042 620 aa16.55■□□□□ 0.24
LIME1-208ENST00000493265 ILKQ13418 452 aa16.55■□□□□ 0.24
LIME1-208ENST00000493265 GTF2H2Q13888 395 aa16.55■□□□□ 0.24
LIME1-208ENST00000493265 UNC50Q53HI1 259 aa16.55■□□□□ 0.24
LIME1-208ENST00000493265 ZNF678Q5SXM1 525 aa16.55■□□□□ 0.24
LIME1-208ENST00000493265 GTF2H2CQ6P1K8 395 aa16.55■□□□□ 0.24
LIME1-208ENST00000493265 LCTLQ6UWM7 567 aa16.55■□□□□ 0.24
LIME1-208ENST00000493265 ZNF574Q6ZN55 896 aaPredicted RBP16.55■□□□□ 0.24
LIME1-208ENST00000493265 GOLGA7Q7Z5G4 137 aa16.55■□□□□ 0.24
LIME1-208ENST00000493265 ATP6V1E2Q96A05 226 aa16.55■□□□□ 0.24
LIME1-208ENST00000493265 HAUS8Q9BT25 410 aa16.55■□□□□ 0.24
LIME1-208ENST00000493265 PCBD2Q9H0N5 130 aa16.55■□□□□ 0.24
LIME1-208ENST00000493265 SEMA4BQ9NPR2 832 aaPredicted RBP16.55■□□□□ 0.24
LIME1-208ENST00000493265 EPHA6Q9UF33 1036 aa16.55■□□□□ 0.24
LIME1-208ENST00000493265 PCTPQ9UKL6 214 aa16.55■□□□□ 0.24
LIME1-208ENST00000493265 KCNE2Q9Y6J6 123 aa16.55■□□□□ 0.24
LIME1-208ENST00000493265 APC2O95996 2303 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 ASXL3Q9C0F0 2248 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 MN1Q10571 1320 aaPredicted RBP16.54■□□□□ 0.24
LIME1-208ENST00000493265 IGHV5-10-1A0A0J9YXX1 117 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 TLCD2A6NGC4 264 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 E7EQ34 232 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 NTN3O00634 580 aaPredicted RBP16.54■□□□□ 0.24
LIME1-208ENST00000493265 E2F3O00716 465 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 CLGNO14967 610 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 PRAMEF10O60809 474 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 CCNDBP1O95273 360 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 RPS17P08708 135 aaKnown RBP16.54■□□□□ 0.24
LIME1-208ENST00000493265 ST6GAL1P15907 406 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 MAGP20916 626 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 CCR10P46092 362 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 ARL4DP49703 201 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 SLC18A1P54219 525 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 DNAJB13P59910 316 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 INSM1Q01101 510 aaPredicted RBP16.54■□□□□ 0.24
LIME1-208ENST00000493265 MEF2AQ02078 507 aaPredicted RBP16.54■□□□□ 0.24
LIME1-208ENST00000493265 PRDX1Q06830 199 aaKnown RBP16.54■□□□□ 0.24
LIME1-208ENST00000493265 ASPHQ12797 758 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 SQSTM1Q13501 440 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 CHI3L2Q15782 390 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 SLC5A12Q1EHB4 618 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 CATSPEREQ5SY80 951 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 RBM44Q6ZP01 1051 aaKnown RBP16.54■□□□□ 0.24
LIME1-208ENST00000493265 B3GNT8Q7Z7M8 397 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 TMPRSS11BQ86T26 416 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 MARCH9Q86YJ5 346 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 MYLK4Q86YV6 388 aaPredicted RBP16.54■□□□□ 0.24
LIME1-208ENST00000493265 KLHDC8AQ8IYD2 350 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 DCBLD1Q8N8Z6 715 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 RCBTB1Q8NDN9 531 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 OR4D9Q8NGE8 314 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 TRPC4APQ8TEL6 797 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 DYDC1Q8WWB3 177 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 SLC5A11Q8WWX8 675 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 NEIL2Q969S2 332 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 L3HYPDHQ96EM0 354 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 CCDC74BQ96LY2 380 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 DPH7Q9BTV6 452 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 GATA5Q9BWX5 397 aaPredicted RBP16.54■□□□□ 0.24
LIME1-208ENST00000493265 RAB33BQ9H082 229 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 NOL11Q9H8H0 719 aaKnown RBP16.54■□□□□ 0.24
LIME1-208ENST00000493265 IPPKQ9H8X2 491 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 SLC6A20Q9NP91 592 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 SOHLH2Q9NX45 425 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 RAXQ9Y2V3 346 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 PCDHGA1Q9Y5H4 931 aa16.54■□□□□ 0.24
LIME1-208ENST00000493265 CELSR3Q9NYQ7 3312 aa16.53■□□□□ 0.24
LIME1-208ENST00000493265 IGSF10Q6WRI0 2623 aa16.53■□□□□ 0.24
LIME1-208ENST00000493265 IGHV5-51A0A0C4DH38 117 aa16.53■□□□□ 0.24
LIME1-208ENST00000493265 H7BY64 318 aa16.53■□□□□ 0.24
LIME1-208ENST00000493265 BIRC5O15392 142 aa16.53■□□□□ 0.24
LIME1-208ENST00000493265 NRP2O60462 931 aa16.53■□□□□ 0.24
LIME1-208ENST00000493265 KATNA1O75449 491 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms