RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 PSMC3IPQ9P2W1 217 aaPredicted RBP13.41□□□□□ -0.26
CCM2-217ENST00000492883 TBK1Q9UHD2 729 aa13.41□□□□□ -0.26
CCM2-217ENST00000492883 IGKV1-8A0A0C4DH67 115 aa13.4□□□□□ -0.26
CCM2-217ENST00000492883 TEX51A0A1B0GUA7 166 aa13.4□□□□□ -0.26
CCM2-217ENST00000492883 OR2A25A4D2G3 310 aa13.4□□□□□ -0.26
CCM2-217ENST00000492883 SUPT3HB4E1H0 165 aa13.4□□□□□ -0.26
CCM2-217ENST00000492883 ZNF749O43361 778 aa13.4□□□□□ -0.26
CCM2-217ENST00000492883 SRPX2O60687 465 aaPredicted RBP13.4□□□□□ -0.26
CCM2-217ENST00000492883 CTSVO60911 334 aa13.4□□□□□ -0.26
CCM2-217ENST00000492883 CPNE3O75131 537 aaKnown RBP13.4□□□□□ -0.26
CCM2-217ENST00000492883 SUPT3HO75486 399 aa13.4□□□□□ -0.26
CCM2-217ENST00000492883 DLGAP3O95886 979 aa13.4□□□□□ -0.26
CCM2-217ENST00000492883 KLK3P07288 261 aaPredicted RBP13.4□□□□□ -0.26
CCM2-217ENST00000492883 KCNC1P48547 511 aa13.4□□□□□ -0.26
CCM2-217ENST00000492883 CSRP3P50461 194 aa13.4□□□□□ -0.26
CCM2-217ENST00000492883 MAP7Q14244 749 aa13.4□□□□□ -0.26
CCM2-217ENST00000492883 ACAP2Q15057 778 aa13.4□□□□□ -0.26
CCM2-217ENST00000492883 CDKL4Q5MAI5 379 aa13.4□□□□□ -0.26
CCM2-217ENST00000492883 SULT1C3Q6IMI6 304 aa13.4□□□□□ -0.26
CCM2-217ENST00000492883 TLDC1Q6P9B6 456 aa13.4□□□□□ -0.26
CCM2-217ENST00000492883 TIFABQ6ZNK6 161 aa13.4□□□□□ -0.26
CCM2-217ENST00000492883 CENPLQ8N0S6 344 aaPredicted RBP13.4□□□□□ -0.26
CCM2-217ENST00000492883 CNPY4Q8N129 248 aa13.4□□□□□ -0.26
CCM2-217ENST00000492883 ZNF655Q8N720 491 aaPredicted RBP13.4□□□□□ -0.26
CCM2-217ENST00000492883 AENQ8WTP8 325 aaKnown RBP13.4□□□□□ -0.26
CCM2-217ENST00000492883 ISL2Q96A47 359 aa13.4□□□□□ -0.26
CCM2-217ENST00000492883 ZFYVE21Q9BQ24 234 aa13.4□□□□□ -0.26
CCM2-217ENST00000492883 SELENOSQ9BQE4 189 aa13.4□□□□□ -0.26
CCM2-217ENST00000492883 ACTR5Q9H9F9 607 aaPredicted RBP13.4□□□□□ -0.26
CCM2-217ENST00000492883 TMEM184CQ9NVA4 438 aa13.4□□□□□ -0.26
CCM2-217ENST00000492883 CUEDC1Q9NWM3 386 aaPredicted RBP13.4□□□□□ -0.26
CCM2-217ENST00000492883 PADI1Q9ULC6 663 aa13.4□□□□□ -0.26
CCM2-217ENST00000492883 SLC22A14Q9Y267 594 aa13.4□□□□□ -0.26
CCM2-217ENST00000492883 DYRK1BQ9Y463 629 aa13.4□□□□□ -0.26
CCM2-217ENST00000492883 PCDHB3Q9Y5E6 796 aa13.4□□□□□ -0.26
CCM2-217ENST00000492883 AP1M2Q9Y6Q5 423 aa13.4□□□□□ -0.26
CCM2-217ENST00000492883 CCDC189A1A4V9 331 aa13.39□□□□□ -0.27
CCM2-217ENST00000492883 SMIM23A6NLE4 172 aa13.39□□□□□ -0.27
CCM2-217ENST00000492883 SYCE1LA8MT33 242 aa13.39□□□□□ -0.27
CCM2-217ENST00000492883 ZSCAN9O15535 394 aaPredicted RBP13.39□□□□□ -0.27
CCM2-217ENST00000492883 NRP2O60462 931 aa13.39□□□□□ -0.27
CCM2-217ENST00000492883 KERAO60938 352 aa13.39□□□□□ -0.27
CCM2-217ENST00000492883 WDR47O94967 919 aa13.39□□□□□ -0.27
CCM2-217ENST00000492883 EIF2S1P05198 315 aaKnown RBP13.39□□□□□ -0.27
CCM2-217ENST00000492883 CTSBP07858 339 aa13.39□□□□□ -0.27
CCM2-217ENST00000492883 HBQ1P09105 142 aa13.39□□□□□ -0.27
CCM2-217ENST00000492883 COL6A2P12110 1019 aa13.39□□□□□ -0.27
CCM2-217ENST00000492883 CDH1P12830 882 aa13.39□□□□□ -0.27
CCM2-217ENST00000492883 EZRP15311 586 aaKnown RBP13.39□□□□□ -0.27
CCM2-217ENST00000492883 GRK3P35626 688 aa13.39□□□□□ -0.27
CCM2-217ENST00000492883 GDF5P43026 501 aa13.39□□□□□ -0.27
CCM2-217ENST00000492883 MAGEA12P43365 314 aa13.39□□□□□ -0.27
CCM2-217ENST00000492883 SLCO1A2P46721 670 aa13.39□□□□□ -0.27
CCM2-217ENST00000492883 VSX2P58304 361 aaPredicted RBP13.39□□□□□ -0.27
CCM2-217ENST00000492883 TLE3Q04726 772 aa13.39□□□□□ -0.27
CCM2-217ENST00000492883 NAA30Q147X3 362 aaPredicted RBP13.39□□□□□ -0.27
CCM2-217ENST00000492883 C18orf21Q32NC0 220 aaPredicted RBP13.39□□□□□ -0.27
CCM2-217ENST00000492883 TCTE1Q5JU00 501 aa13.39□□□□□ -0.27
CCM2-217ENST00000492883 WASHC2DQ5SRD0 308 aa13.39□□□□□ -0.27
CCM2-217ENST00000492883 ZNF425Q6IV72 752 aa13.39□□□□□ -0.27
CCM2-217ENST00000492883 RNF44Q7L0R7 432 aa13.39□□□□□ -0.27
CCM2-217ENST00000492883 PAQR7Q86WK9 346 aa13.39□□□□□ -0.27
CCM2-217ENST00000492883 PLD6Q8N2A8 252 aaKnown RBP13.39□□□□□ -0.27
CCM2-217ENST00000492883 CAVIN3Q969G5 261 aa13.39□□□□□ -0.27
CCM2-217ENST00000492883 CABS1Q96KC9 395 aa13.39□□□□□ -0.27
CCM2-217ENST00000492883 SCYL1Q96KG9 808 aa13.39□□□□□ -0.27
CCM2-217ENST00000492883 OR4K3Q96R72 315 aa13.39□□□□□ -0.27
CCM2-217ENST00000492883 CCNL2Q96S94 520 aaPredicted RBP13.39□□□□□ -0.27
CCM2-217ENST00000492883 NDC1Q9BTX1 674 aa13.39□□□□□ -0.27
CCM2-217ENST00000492883 CNOT10Q9H9A5 744 aaKnown RBP13.39□□□□□ -0.27
CCM2-217ENST00000492883 PPCSQ9HAB8 311 aa13.39□□□□□ -0.27
CCM2-217ENST00000492883 KCNE2Q9Y6J6 123 aa13.39□□□□□ -0.27
CCM2-217ENST00000492883 KNTC1P50748 2209 aa13.39□□□□□ -0.27
CCM2-217ENST00000492883 LOC105369274A0A096LPK9 316 aa13.38□□□□□ -0.27
CCM2-217ENST00000492883 LOC102723532A0A0G2JNH3 316 aa13.38□□□□□ -0.27
CCM2-217ENST00000492883 UBXN8O00124 270 aa13.38□□□□□ -0.27
CCM2-217ENST00000492883 TAPBPO15533 448 aa13.38□□□□□ -0.27
CCM2-217ENST00000492883 RFPL1O75677 317 aa13.38□□□□□ -0.27
CCM2-217ENST00000492883 RBP1P09455 135 aa13.38□□□□□ -0.27
CCM2-217ENST00000492883 ALAS2P22557 587 aa13.38□□□□□ -0.27
CCM2-217ENST00000492883 HSPA7P48741 367 aa13.38□□□□□ -0.27
CCM2-217ENST00000492883 CCR8P51685 355 aa13.38□□□□□ -0.27
CCM2-217ENST00000492883 RELAQ04206 551 aa13.38□□□□□ -0.27
CCM2-217ENST00000492883 IFFO1Q0D2I5 559 aa13.38□□□□□ -0.27
CCM2-217ENST00000492883 ABHD18Q0P651 414 aa13.38□□□□□ -0.27
CCM2-217ENST00000492883 GRM7Q14831 915 aa13.38□□□□□ -0.27
CCM2-217ENST00000492883 TSNAXIP1Q2TAA8 658 aa13.38□□□□□ -0.27
CCM2-217ENST00000492883 FBXO48Q5FWF7 155 aa13.38□□□□□ -0.27
CCM2-217ENST00000492883 FRMPD2BQ6IN97 320 aa13.38□□□□□ -0.27
CCM2-217ENST00000492883 C19orf48Q6RUI8 117 aa13.38□□□□□ -0.27
CCM2-217ENST00000492883 VASH2Q86V25 355 aa13.38□□□□□ -0.27
CCM2-217ENST00000492883 PLD3Q8IV08 490 aa13.38□□□□□ -0.27
CCM2-217ENST00000492883 OR4N4Q8N0Y3 316 aa13.38□□□□□ -0.27
CCM2-217ENST00000492883 TTC29Q8NA56 475 aaPredicted RBP13.38□□□□□ -0.27
CCM2-217ENST00000492883 SLC38A9Q8NBW4 561 aa13.38□□□□□ -0.27
CCM2-217ENST00000492883 PDPRQ8NCN5 879 aa13.38□□□□□ -0.27
CCM2-217ENST00000492883 RHEBL1Q8TAI7 183 aa13.38□□□□□ -0.27
CCM2-217ENST00000492883 SLC5A11Q8WWX8 675 aa13.38□□□□□ -0.27
CCM2-217ENST00000492883 MR1Q95460 341 aa13.38□□□□□ -0.27
CCM2-217ENST00000492883 RERGQ96A58 199 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms