RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 NDUFA9Q16795 377 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 LONRF1Q17RB8 773 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 PRTGQ2VWP7 1150 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 CRB2Q5IJ48 1285 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 ICE2Q659A1 982 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 CCDC137Q6PK04 289 aaKnown RBP11.88□□□□□ -0.51
COL6A1-205ENST00000492851 ISLR2Q6UXK2 745 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 REXO1L1PQ8IX06 675 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 PALM2Q8IXS6 379 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 KBTBD2Q8IY47 623 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 OR4N4Q8N0Y3 316 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 CSNK1A1LQ8N752 337 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.88□□□□□ -0.51
COL6A1-205ENST00000492851 ZNF669Q96BR6 464 aaPredicted RBP11.88□□□□□ -0.51
COL6A1-205ENST00000492851 THOC3Q96J01 351 aaKnown RBP11.88□□□□□ -0.51
COL6A1-205ENST00000492851 SERPINB12Q96P63 405 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 PKP4Q99569 1192 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 BARD1Q99728 777 aaKnown RBP11.88□□□□□ -0.51
COL6A1-205ENST00000492851 ACAT2Q9BWD1 397 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 FAM129AQ9BZQ8 928 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 PCBD2Q9H0N5 130 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 MKKSQ9NPJ1 570 aaPredicted RBP11.88□□□□□ -0.51
COL6A1-205ENST00000492851 C14orf105Q9NVL8 296 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 ASF1BQ9NVP2 202 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 CTSFQ9UBX1 484 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 PLEKHB1Q9UF11 243 aaPredicted RBP11.88□□□□□ -0.51
COL6A1-205ENST00000492851 C3orf18Q9UK00 162 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 DHRS7Q9Y394 339 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 PCDHGA10Q9Y5H3 936 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 MAU2Q9Y6X3 613 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 MAST4O15021 2626 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 NSG1A0A0A6YYJ2 146 aa11.87□□□□□ -0.51
COL6A1-205ENST00000492851 ANKUB1A6NFN9 424 aa11.87□□□□□ -0.51
COL6A1-205ENST00000492851 E7ENX8 843 aa11.87□□□□□ -0.51
COL6A1-205ENST00000492851 PGRMC1O00264 195 aaKnown RBP11.87□□□□□ -0.51
COL6A1-205ENST00000492851 SEMA7AO75326 666 aa11.87□□□□□ -0.51
COL6A1-205ENST00000492851 SLC16A8O95907 504 aa11.87□□□□□ -0.51
COL6A1-205ENST00000492851 TSFMP43897 325 aaKnown RBP11.87□□□□□ -0.51
COL6A1-205ENST00000492851 TERF1P54274 439 aa11.87□□□□□ -0.51
COL6A1-205ENST00000492851 EMP2P54851 167 aa11.87□□□□□ -0.51
COL6A1-205ENST00000492851 CCZ1BP86790 482 aa11.87□□□□□ -0.51
COL6A1-205ENST00000492851 CCZ1P86791 482 aaPredicted RBP11.87□□□□□ -0.51
COL6A1-205ENST00000492851 TAP2Q03519 686 aa11.87□□□□□ -0.51
COL6A1-205ENST00000492851 CTBP1Q13363 440 aa11.87□□□□□ -0.51
COL6A1-205ENST00000492851 MRPL49Q13405 166 aaKnown RBP11.87□□□□□ -0.51
COL6A1-205ENST00000492851 TSTA3Q13630 321 aaPredicted RBP11.87□□□□□ -0.51
COL6A1-205ENST00000492851 PTK6Q13882 451 aa11.87□□□□□ -0.51
COL6A1-205ENST00000492851 FAM53BQ14153 422 aa11.87□□□□□ -0.51
COL6A1-205ENST00000492851 NR6A1Q15406 480 aa11.87□□□□□ -0.51
COL6A1-205ENST00000492851 PRR30Q53SZ7 412 aaPredicted RBP11.87□□□□□ -0.51
COL6A1-205ENST00000492851 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.87□□□□□ -0.51
COL6A1-205ENST00000492851 THEMIS2Q5TEJ8 643 aa11.87□□□□□ -0.51
COL6A1-205ENST00000492851 ATG9BQ674R7 924 aa11.87□□□□□ -0.51
COL6A1-205ENST00000492851 ZNF425Q6IV72 752 aa11.87□□□□□ -0.51
COL6A1-205ENST00000492851 SUSD1Q6UWL2 747 aa11.87□□□□□ -0.51
COL6A1-205ENST00000492851 SHISA6Q6ZSJ9 500 aa11.87□□□□□ -0.51
COL6A1-205ENST00000492851 NDUFAF7Q7L592 441 aa11.87□□□□□ -0.51
COL6A1-205ENST00000492851 PCGF5Q86SE9 256 aa11.87□□□□□ -0.51
COL6A1-205ENST00000492851 PAQR7Q86WK9 346 aa11.87□□□□□ -0.51
COL6A1-205ENST00000492851 PARP9Q8IXQ6 854 aa11.87□□□□□ -0.51
COL6A1-205ENST00000492851 METTL27Q8N6F8 245 aaPredicted RBP11.87□□□□□ -0.51
COL6A1-205ENST00000492851 MCOLN3Q8TDD5 553 aa11.87□□□□□ -0.51
COL6A1-205ENST00000492851 ZNF480Q8WV37 535 aa11.87□□□□□ -0.51
COL6A1-205ENST00000492851 FAM136AQ96C01 138 aa11.87□□□□□ -0.51
COL6A1-205ENST00000492851 C19orf60Q96EN9 201 aa11.87□□□□□ -0.51
COL6A1-205ENST00000492851 OR2A5Q96R48 311 aa11.87□□□□□ -0.51
COL6A1-205ENST00000492851 FAM167BQ9BTA0 163 aa11.87□□□□□ -0.51
COL6A1-205ENST00000492851 NAT9Q9BTE0 207 aa11.87□□□□□ -0.51
COL6A1-205ENST00000492851 YIPF2Q9BWQ6 316 aa11.87□□□□□ -0.51
COL6A1-205ENST00000492851 TGIF2Q9GZN2 237 aa11.87□□□□□ -0.51
COL6A1-205ENST00000492851 C20orf96Q9NUD7 363 aaPredicted RBP11.87□□□□□ -0.51
COL6A1-205ENST00000492851 TRPC4Q9UBN4 977 aa11.87□□□□□ -0.51
COL6A1-205ENST00000492851 TAC3Q9UHF0 121 aa11.87□□□□□ -0.51
COL6A1-205ENST00000492851 SLC5A6Q9Y289 635 aa11.87□□□□□ -0.51
COL6A1-205ENST00000492851 MAD1L1Q9Y6D9 718 aa11.87□□□□□ -0.51
COL6A1-205ENST00000492851 LRRK2Q5S007 2527 aa11.87□□□□□ -0.51
COL6A1-205ENST00000492851 COL12A1Q99715 3063 aa11.86□□□□□ -0.51
COL6A1-205ENST00000492851 ZCWPW2A0A1B0GU75 182 aa11.86□□□□□ -0.51
COL6A1-205ENST00000492851 A0A1W2PQ72 361 aa11.86□□□□□ -0.51
COL6A1-205ENST00000492851 SMAPO00193 183 aa11.86□□□□□ -0.51
COL6A1-205ENST00000492851 CES2O00748 559 aa11.86□□□□□ -0.51
COL6A1-205ENST00000492851 TTC4O95801 387 aa11.86□□□□□ -0.51
COL6A1-205ENST00000492851 SYF2O95926 243 aaKnown RBP11.86□□□□□ -0.51
COL6A1-205ENST00000492851 HEXBP07686 556 aa11.86□□□□□ -0.51
COL6A1-205ENST00000492851 CYC1P08574 325 aa11.86□□□□□ -0.51
COL6A1-205ENST00000492851 CCND1P24385 295 aa11.86□□□□□ -0.51
COL6A1-205ENST00000492851 SLC26A3P40879 764 aa11.86□□□□□ -0.51
COL6A1-205ENST00000492851 AVPR1BP47901 424 aa11.86□□□□□ -0.51
COL6A1-205ENST00000492851 FNTAP49354 379 aa11.86□□□□□ -0.51
COL6A1-205ENST00000492851 RGS4P49798 205 aa11.86□□□□□ -0.51
COL6A1-205ENST00000492851 FOXL2P58012 376 aa11.86□□□□□ -0.51
COL6A1-205ENST00000492851 MFAP5Q13361 173 aa11.86□□□□□ -0.51
COL6A1-205ENST00000492851 ZNF169Q14929 603 aaPredicted RBP11.86□□□□□ -0.51
COL6A1-205ENST00000492851 ANKRD22Q5VYY1 191 aa11.86□□□□□ -0.51
COL6A1-205ENST00000492851 RPUSD3Q6P087 351 aaKnown RBP11.86□□□□□ -0.51
COL6A1-205ENST00000492851 TTC27Q6P3X3 843 aa11.86□□□□□ -0.51
COL6A1-205ENST00000492851 RIPOR1Q6ZS17 1223 aa11.86□□□□□ -0.51
COL6A1-205ENST00000492851 ADCK2Q7Z695 626 aa11.86□□□□□ -0.51
COL6A1-205ENST00000492851 CUZD1Q86UP6 607 aa11.86□□□□□ -0.51
COL6A1-205ENST00000492851 PPIL6Q8IXY8 311 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms