RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 RIPOR1Q6ZS17 1223 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 RNF44Q7L0R7 432 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 NDUFAF7Q7L592 441 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 SDCCAG8Q86SQ7 713 aaPredicted RBP8.72□□□□□ -1.01
HDAC3-212ENST00000492407 SLC13A5Q86YT5 568 aaPredicted RBP8.72□□□□□ -1.01
HDAC3-212ENST00000492407 KBTBD2Q8IY47 623 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 BCORP1Q8N888 145 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 CCDC89Q8N998 374 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 OR2L3Q8NG85 312 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 OR2A1Q8NGT9 310 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 CFAP61Q8NHU2 1237 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 MIEF2Q96C03 454 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 ZNF778Q96MU6 729 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 TSGA10Q9BZW7 698 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 TGIF2Q9GZN2 237 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 RBSNQ9H1K0 784 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 RUBCNLQ9H714 662 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 ZBTB20Q9HC78 741 aaPredicted RBP8.72□□□□□ -1.01
HDAC3-212ENST00000492407 CHRAC1Q9NRG0 131 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 C14orf105Q9NVL8 296 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 TMCC3Q9ULS5 477 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 VPS9D1Q9Y2B5 631 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 NTNG1Q9Y2I2 539 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 SEC16AO15027 2179 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 MYO9AB2RTY4 2548 aa8.72□□□□□ -1.01
HDAC3-212ENST00000492407 TNRC6AQ8NDV7 1962 aaKnown RBP8.72□□□□□ -1.01
HDAC3-212ENST00000492407 ICE1Q9Y2F5 2266 aa8.71□□□□□ -1.01
HDAC3-212ENST00000492407 OR2A25A4D2G3 310 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 IQCF5A8MTL0 148 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 MAP2K7O14733 419 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 CTSVO60911 334 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 VPS26AO75436 327 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 CCNDBP1O95273 360 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 FTCDO95954 541 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 ESR1P03372 595 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 SERPINA7P05543 415 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 STSP08842 583 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 ZGLP1P0C6A0 271 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 ERGP11308 486 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 CXCR2P25025 360 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 CMPK1P30085 196 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 GRIA1P42261 906 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 CSE1LP55060 971 aaKnown RBP8.71□□□□□ -1.02
HDAC3-212ENST00000492407 VSX2P58304 361 aaPredicted RBP8.71□□□□□ -1.02
HDAC3-212ENST00000492407 ABATP80404 500 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 KLC1Q07866 573 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 CDC16Q13042 620 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 DSG2Q14126 1118 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 GBX1Q14549 363 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.71□□□□□ -1.02
HDAC3-212ENST00000492407 PRTGQ2VWP7 1150 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 FBXO42Q6P3S6 717 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 FAM180AQ6UWF9 173 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 NEK10Q6ZWH5 1172 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 TMEM139Q8IV31 216 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 FBXO15Q8NCQ5 510 aaPredicted RBP8.71□□□□□ -1.02
HDAC3-212ENST00000492407 STT3BQ8TCJ2 826 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 LKAAEAR1Q8TD35 194 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 GRHL3Q8TE85 626 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 MAIP1Q8WWC4 291 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 ATG4AQ8WYN0 398 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 SMPDL3AQ92484 453 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 HAS2Q92819 552 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 RELTQ969Z4 430 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 THOC3Q96J01 351 aaKnown RBP8.71□□□□□ -1.02
HDAC3-212ENST00000492407 BIRC8Q96P09 236 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 IL17FQ96PD4 163 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 ZFYVE21Q9BQ24 234 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 CRB3Q9BUF7 120 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 KIFC1Q9BW19 673 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 RNF32Q9H0A6 362 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 SOX17Q9H6I2 414 aaPredicted RBP8.71□□□□□ -1.02
HDAC3-212ENST00000492407 FAM114A2Q9NRY5 505 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 HOMER3Q9NSC5 361 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 TTC7AQ9ULT0 858 aaPredicted RBP8.71□□□□□ -1.02
HDAC3-212ENST00000492407 PACSIN2Q9UNF0 486 aaPredicted RBP8.71□□□□□ -1.02
HDAC3-212ENST00000492407 ENTPD4Q9Y227 616 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 KLHL20Q9Y2M5 609 aa8.71□□□□□ -1.02
HDAC3-212ENST00000492407 ITPR2Q14571 2701 aa8.7□□□□□ -1.02
HDAC3-212ENST00000492407 LOC102723996A0A087X1L8 192 aa8.7□□□□□ -1.02
HDAC3-212ENST00000492407 NSG1A0A0A6YYJ2 146 aa8.7□□□□□ -1.02
HDAC3-212ENST00000492407 TRAV17A0A0B4J275 112 aa8.7□□□□□ -1.02
HDAC3-212ENST00000492407 A0A1W2PPV9 198 aa8.7□□□□□ -1.02
HDAC3-212ENST00000492407 DYTNA2CJ06 578 aa8.7□□□□□ -1.02
HDAC3-212ENST00000492407 MYO1CO00159 1063 aa8.7□□□□□ -1.02
HDAC3-212ENST00000492407 E2F3O00716 465 aa8.7□□□□□ -1.02
HDAC3-212ENST00000492407 CDK2AP1O14519 115 aa8.7□□□□□ -1.02
HDAC3-212ENST00000492407 LRRTM2O43300 516 aa8.7□□□□□ -1.02
HDAC3-212ENST00000492407 HNRNPRO43390 633 aaKnown RBP8.7□□□□□ -1.02
HDAC3-212ENST00000492407 KRT38O76015 456 aa8.7□□□□□ -1.02
HDAC3-212ENST00000492407 BMP10O95393 424 aa8.7□□□□□ -1.02
HDAC3-212ENST00000492407 ERVK-10P10266 1014 aa8.7□□□□□ -1.02
HDAC3-212ENST00000492407 HRH2P25021 359 aa8.7□□□□□ -1.02
HDAC3-212ENST00000492407 MCM3P25205 808 aa8.7□□□□□ -1.02
HDAC3-212ENST00000492407 RPL22P35268 128 aaKnown RBP8.7□□□□□ -1.02
HDAC3-212ENST00000492407 SOX11P35716 441 aa8.7□□□□□ -1.02
HDAC3-212ENST00000492407 SLC26A3P40879 764 aa8.7□□□□□ -1.02
HDAC3-212ENST00000492407 OR1D4P47884 311 aa8.7□□□□□ -1.02
HDAC3-212ENST00000492407 HIF1AQ16665 826 aa8.7□□□□□ -1.02
HDAC3-212ENST00000492407 TYSND1Q2T9J0 566 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms