RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 SLC52A3Q9NQ40 469 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 NECTIN3Q9NQS3 549 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 STARD7Q9NQZ5 370 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 C20orf96Q9NUD7 363 aaPredicted RBP3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 FAM49BQ9NUQ9 324 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 TBC1D13Q9NVG8 400 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 INTS10Q9NVR2 710 aaKnown RBP3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 SYBUQ9NX95 663 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 NSMCE4AQ9NXX6 385 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 ERAP1Q9NZ08 941 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 USE1Q9NZ43 259 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 GPRC5BQ9NZH0 403 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 ADA2Q9NZK5 511 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 PKD2L2Q9NZM6 624 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 ACTR3BQ9P1U1 418 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 IFT80Q9P2H3 777 aaPredicted RBP3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 SLC17A6Q9P2U8 582 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 DKK3Q9UBP4 350 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 TRPS1Q9UHF7 1281 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 PCSK1NQ9UHG2 260 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 EVLQ9UI08 416 aaPredicted RBP3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 DAPK2Q9UIK4 370 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 MSRAQ9UJ68 235 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 CPSF3Q9UKF6 684 aaKnown RBP3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 FAM50BQ9Y247 325 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 PRG3Q9Y2Y8 225 aaPredicted RBP3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 MTF2Q9Y483 593 aaPredicted RBP3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 UGT2A1Q9Y4X1 527 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 TIMM22Q9Y584 194 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 TRPV2Q9Y5S1 764 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 A3GALT2U3KPV4 340 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 PDE4DIPQ5VU43 2346 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 CUL9Q8IWT3 2517 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 NUP210Q8TEM1 1887 aaPredicted RBP3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 ABHD14A-ACY1A0A1B0GW23 586 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 ILVBLA1L0T0 632 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 CCDC78A2IDD5 438 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 SAGE2PA6NJ88 616 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 TBKBP1A7MCY6 615 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 TTC34A8MYJ7 566 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 UBXN8O00124 270 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 UPK1AO00322 258 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 CLDN5O00501 218 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 NEMP1O14524 444 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 EI24O14681 340 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 PTGESO14684 152 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 ARPC2O15144 300 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 OGTO15294 1046 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 CFLARO15519 480 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 IDH3BO43837 385 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 HBP1O60381 514 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 NRP2O60462 931 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 MRPS14O60783 128 aaKnown RBP3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 UGT2B11O75310 529 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 DUSP11O75319 330 aaKnown RBP3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 SNX4O95219 450 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 FKBP9O95302 570 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 WISP3O95389 354 aaPredicted RBP3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 MATN4O95460 622 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 AP2A1O95782 977 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 PTTG1O95997 202 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 POLBP06746 335 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 ADH4P08319 380 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 SLC35E2BP0CK96 405 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 PF4V1P10720 104 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 UMPSP11172 480 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 CKBP12277 381 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 GFAPP14136 432 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 PDGFRAP16234 1089 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 RPL17P18621 184 aaKnown RBP3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 IMPDH1P20839 514 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 PCMT1P22061 227 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 LPOP22079 712 aaPredicted RBP3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 IL10P22301 178 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 GPX3P22352 226 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 SLC6A2P23975 617 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 CRHBPP24387 322 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 ATP5F1P24539 256 aaPredicted RBP3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 PSMA4P25789 261 aaKnown RBP3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 HTR1BP28222 390 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 CD40LGP29965 261 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 LRPAP1P30533 357 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 TRPC1P48995 793 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 RPL34P49207 117 aaKnown RBP3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 RENBPP51606 427 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 ALDH3A2P51648 485 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 KPNA2P52292 529 aaKnown RBP3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 KPNA1P52294 538 aaPredicted RBP3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 SLC7A2P52569 658 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 EFNA5P52803 228 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 EEFSECP57772 596 aaKnown RBP3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 PRAMEP78395 509 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 GBE1Q04446 702 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 OCA2Q04671 838 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 EPS8Q12929 822 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 GRIK2Q13002 908 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 NME3Q13232 169 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 ITGADQ13349 1161 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 IL18R1Q13478 541 aa3.37□□□□□ -1.87
CRNKL1-203ENST00000490258 SELPLGQ14242 412 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms