RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 H0YGG7 62 aa13.25□□□□□ -0.29
VARS-227ENST00000489979 TJP3O95049 919 aa13.25□□□□□ -0.29
VARS-227ENST00000489979 C1orf105O95561 183 aa13.25□□□□□ -0.29
VARS-227ENST00000489979 ICAM2P13598 275 aa13.25□□□□□ -0.29
VARS-227ENST00000489979 ANP32AP39687 249 aaKnown RBP13.25□□□□□ -0.29
VARS-227ENST00000489979 ARF3P61204 181 aaPredicted RBP13.25□□□□□ -0.29
VARS-227ENST00000489979 AP2B1P63010 937 aa13.25□□□□□ -0.29
VARS-227ENST00000489979 TLE4Q04727 773 aa13.25□□□□□ -0.29
VARS-227ENST00000489979 SEMA3AQ14563 771 aa13.25□□□□□ -0.29
VARS-227ENST00000489979 TMED2Q15363 201 aa13.25□□□□□ -0.29
VARS-227ENST00000489979 LONRF1Q17RB8 773 aa13.25□□□□□ -0.29
VARS-227ENST00000489979 TMEM205Q6UW68 189 aa13.25□□□□□ -0.29
VARS-227ENST00000489979 NCCRP1Q6ZVX7 275 aaPredicted RBP13.25□□□□□ -0.29
VARS-227ENST00000489979 ZNF534Q76KX8 674 aa13.25□□□□□ -0.29
VARS-227ENST00000489979 VSTM4Q8IW00 320 aa13.25□□□□□ -0.29
VARS-227ENST00000489979 CEP97Q8IW35 865 aa13.25□□□□□ -0.29
VARS-227ENST00000489979 RAB42Q8N4Z0 105 aa13.25□□□□□ -0.29
VARS-227ENST00000489979 AMER3Q8N944 861 aa13.25□□□□□ -0.29
VARS-227ENST00000489979 OR52K1Q8NGK4 314 aa13.25□□□□□ -0.29
VARS-227ENST00000489979 OR2A1Q8NGT9 310 aa13.25□□□□□ -0.29
VARS-227ENST00000489979 OR4L1Q8NH43 312 aa13.25□□□□□ -0.29
VARS-227ENST00000489979 HMGCLL1Q8TB92 370 aa13.25□□□□□ -0.29
VARS-227ENST00000489979 CHTF18Q8WVB6 975 aa13.25□□□□□ -0.29
VARS-227ENST00000489979 MMABQ96EY8 250 aaPredicted RBP13.25□□□□□ -0.29
VARS-227ENST00000489979 GPR137Q96N19 417 aa13.25□□□□□ -0.29
VARS-227ENST00000489979 MKKSQ9NPJ1 570 aaPredicted RBP13.25□□□□□ -0.29
VARS-227ENST00000489979 TEKT2Q9UIF3 430 aa13.25□□□□□ -0.29
VARS-227ENST00000489979 TTC7AQ9ULT0 858 aaPredicted RBP13.25□□□□□ -0.29
VARS-227ENST00000489979 RUVBL1Q9Y265 456 aaKnown RBP13.25□□□□□ -0.29
VARS-227ENST00000489979 ZNF835Q9Y2P0 537 aa13.25□□□□□ -0.29
VARS-227ENST00000489979 MEMO1Q9Y316 297 aa13.25□□□□□ -0.29
VARS-227ENST00000489979 PCDHA3Q9Y5H8 950 aa13.25□□□□□ -0.29
VARS-227ENST00000489979 NFS1Q9Y697 457 aa13.25□□□□□ -0.29
VARS-227ENST00000489979 OR2A25A4D2G3 310 aa13.24□□□□□ -0.29
VARS-227ENST00000489979 RCCD1A6NED2 376 aa13.24□□□□□ -0.29
VARS-227ENST00000489979 A8MUI8 341 aa13.24□□□□□ -0.29
VARS-227ENST00000489979 PRPF4O43172 522 aaKnown RBP eCLIP13.24□□□□□ -0.29
VARS-227ENST00000489979 PSMD3O43242 534 aa13.24□□□□□ -0.29
VARS-227ENST00000489979 CBFA2T2O43439 604 aa13.24□□□□□ -0.29
VARS-227ENST00000489979 DIAPH2O60879 1101 aa13.24□□□□□ -0.29
VARS-227ENST00000489979 ZNF189O75820 626 aaPredicted RBP13.24□□□□□ -0.29
VARS-227ENST00000489979 ANXA5P08758 320 aa13.24□□□□□ -0.29
VARS-227ENST00000489979 SLC26A3P40879 764 aa13.24□□□□□ -0.29
VARS-227ENST00000489979 EFNA3P52797 238 aa13.24□□□□□ -0.29
VARS-227ENST00000489979 EMP3P54852 163 aa13.24□□□□□ -0.29
VARS-227ENST00000489979 FASTKQ14296 549 aaKnown RBP13.24□□□□□ -0.29
VARS-227ENST00000489979 SYT16Q17RD7 645 aa13.24□□□□□ -0.29
VARS-227ENST00000489979 HKDC1Q2TB90 917 aa13.24□□□□□ -0.29
VARS-227ENST00000489979 P3H1Q32P28 736 aa13.24□□□□□ -0.29
VARS-227ENST00000489979 FASTKD1Q53R41 847 aaKnown RBP13.24□□□□□ -0.29
VARS-227ENST00000489979 TSTD2Q5T7W7 516 aa13.24□□□□□ -0.29
VARS-227ENST00000489979 Q6ZPB1 254 aaPredicted RBP13.24□□□□□ -0.29
VARS-227ENST00000489979 LDB1Q86U70 411 aaPredicted RBP13.24□□□□□ -0.29
VARS-227ENST00000489979 SPPL2CQ8IUH8 684 aa13.24□□□□□ -0.29
VARS-227ENST00000489979 OR6P1Q8NGX9 317 aa13.24□□□□□ -0.29
VARS-227ENST00000489979 GSDMBQ8TAX9 411 aa13.24□□□□□ -0.29
VARS-227ENST00000489979 THAP3Q8WTV1 239 aaPredicted RBP13.24□□□□□ -0.29
VARS-227ENST00000489979 SKA2Q8WVK7 121 aaPredicted RBP13.24□□□□□ -0.29
VARS-227ENST00000489979 MVB12AQ96EY5 273 aa13.24□□□□□ -0.29
VARS-227ENST00000489979 IMMP1LQ96LU5 166 aa13.24□□□□□ -0.29
VARS-227ENST00000489979 SPOCK3Q9BQ16 436 aa13.24□□□□□ -0.29
VARS-227ENST00000489979 DPH7Q9BTV6 452 aa13.24□□□□□ -0.29
VARS-227ENST00000489979 TUBB6Q9BUF5 446 aa13.24□□□□□ -0.29
VARS-227ENST00000489979 ACAT2Q9BWD1 397 aa13.24□□□□□ -0.29
VARS-227ENST00000489979 TGIF2Q9GZN2 237 aa13.24□□□□□ -0.29
VARS-227ENST00000489979 TSPAN10Q9H1Z9 355 aaPredicted RBP13.24□□□□□ -0.29
VARS-227ENST00000489979 SYNPO2LQ9H987 977 aa13.24□□□□□ -0.29
VARS-227ENST00000489979 RUVBL2Q9Y230 463 aaKnown RBP13.24□□□□□ -0.29
VARS-227ENST00000489979 NAV3Q8IVL0 2385 aa13.23□□□□□ -0.29
VARS-227ENST00000489979 TTI1O43156 1089 aa13.23□□□□□ -0.29
VARS-227ENST00000489979 CMPK1P30085 196 aa13.23□□□□□ -0.29
VARS-227ENST00000489979 PPARGP37231 505 aaPredicted RBP13.23□□□□□ -0.29
VARS-227ENST00000489979 GDF10P55107 478 aa13.23□□□□□ -0.29
VARS-227ENST00000489979 KRTCAP3Q53RY4 240 aa13.23□□□□□ -0.29
VARS-227ENST00000489979 FCRLBQ6BAA4 426 aa13.23□□□□□ -0.29
VARS-227ENST00000489979 LRRC8BQ6P9F7 803 aa13.23□□□□□ -0.29
VARS-227ENST00000489979 LINC00523Q86TU6 105 aa13.23□□□□□ -0.29
VARS-227ENST00000489979 ZC3H7AQ8IWR0 971 aaKnown RBP13.23□□□□□ -0.29
VARS-227ENST00000489979 CSNK1A1LQ8N752 337 aa13.23□□□□□ -0.29
VARS-227ENST00000489979 DNAAF3Q8N9W5 541 aa13.23□□□□□ -0.29
VARS-227ENST00000489979 ZNF778Q96MU6 729 aa13.23□□□□□ -0.29
VARS-227ENST00000489979 HES7Q9BYE0 225 aa13.23□□□□□ -0.29
VARS-227ENST00000489979 MCCC2Q9HCC0 563 aa13.23□□□□□ -0.29
VARS-227ENST00000489979 GPAMQ9HCL2 828 aa13.23□□□□□ -0.29
VARS-227ENST00000489979 MKL2Q9ULH7 1088 aa13.23□□□□□ -0.29
VARS-227ENST00000489979 R3HDM2Q9Y2K5 976 aaKnown RBP13.23□□□□□ -0.29
VARS-227ENST00000489979 NEU2Q9Y3R4 380 aa13.23□□□□□ -0.29
VARS-227ENST00000489979 PCDHA13Q9Y5I0 950 aa13.23□□□□□ -0.29
VARS-227ENST00000489979 A0A0A6YYC8 382 aaPredicted RBP13.22□□□□□ -0.29
VARS-227ENST00000489979 IGHV3-20A0A0C4DH32 117 aa13.22□□□□□ -0.29
VARS-227ENST00000489979 A0A0U1RQJ8 604 aa13.22□□□□□ -0.29
VARS-227ENST00000489979 NPIPA5E9PKD4 350 aa13.22□□□□□ -0.29
VARS-227ENST00000489979 I3L1I5 382 aaPredicted RBP13.22□□□□□ -0.29
VARS-227ENST00000489979 PRMT5O14744 637 aaPredicted RBP13.22□□□□□ -0.29
VARS-227ENST00000489979 ZNHIT1O43257 154 aa13.22□□□□□ -0.29
VARS-227ENST00000489979 FOXS1O43638 330 aa13.22□□□□□ -0.29
VARS-227ENST00000489979 VPS26AO75436 327 aa13.22□□□□□ -0.29
VARS-227ENST00000489979 SEC24DO94855 1032 aaPredicted RBP13.22□□□□□ -0.29
VARS-227ENST00000489979 C8orf89P0DMQ9 161 aa13.22□□□□□ -0.29
VARS-227ENST00000489979 CETN2P41208 172 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms