RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 TDRPQ86YL5 185 aa10.63□□□□□ -0.71
CPSF7-212ENST00000489728 MCATQ8IVS2 390 aaKnown RBP10.63□□□□□ -0.71
CPSF7-212ENST00000489728 CACNA2D3Q8IZS8 1091 aa10.63□□□□□ -0.71
CPSF7-212ENST00000489728 CENPLQ8N0S6 344 aaPredicted RBP10.63□□□□□ -0.71
CPSF7-212ENST00000489728 PPFIBP2Q8ND30 876 aa10.63□□□□□ -0.71
CPSF7-212ENST00000489728 ABHD11Q8NFV4 315 aa10.63□□□□□ -0.71
CPSF7-212ENST00000489728 OR1L3Q8NH93 324 aa10.63□□□□□ -0.71
CPSF7-212ENST00000489728 PROKR1Q8TCW9 393 aa10.63□□□□□ -0.71
CPSF7-212ENST00000489728 ACMSDQ8TDX5 336 aa10.63□□□□□ -0.71
CPSF7-212ENST00000489728 AENQ8WTP8 325 aaKnown RBP10.63□□□□□ -0.71
CPSF7-212ENST00000489728 SNRNP27Q8WVK2 155 aaKnown RBP10.63□□□□□ -0.71
CPSF7-212ENST00000489728 UBLCP1Q8WVY7 318 aaPredicted RBP10.63□□□□□ -0.71
CPSF7-212ENST00000489728 NKD1Q969G9 470 aa10.63□□□□□ -0.71
CPSF7-212ENST00000489728 KIAA1143Q96AT1 154 aaPredicted RBP10.63□□□□□ -0.71
CPSF7-212ENST00000489728 RHBDF1Q96CC6 855 aa10.63□□□□□ -0.71
CPSF7-212ENST00000489728 MRRFQ96E11 262 aaKnown RBP10.63□□□□□ -0.71
CPSF7-212ENST00000489728 THAP11Q96EK4 314 aa10.63□□□□□ -0.71
CPSF7-212ENST00000489728 MED8Q96G25 268 aa10.63□□□□□ -0.71
CPSF7-212ENST00000489728 CCNL2Q96S94 520 aaPredicted RBP10.63□□□□□ -0.71
CPSF7-212ENST00000489728 EGFL8Q99944 293 aa10.63□□□□□ -0.71
CPSF7-212ENST00000489728 C17orf62Q9BQA9 187 aa10.63□□□□□ -0.71
CPSF7-212ENST00000489728 ACAT2Q9BWD1 397 aa10.63□□□□□ -0.71
CPSF7-212ENST00000489728 CAPS2Q9BXY5 557 aa10.63□□□□□ -0.71
CPSF7-212ENST00000489728 KLHL25Q9H0H3 589 aa10.63□□□□□ -0.71
CPSF7-212ENST00000489728 IGSF5Q9NSI5 407 aa10.63□□□□□ -0.71
CPSF7-212ENST00000489728 NUDT4Q9NZJ9 180 aa10.63□□□□□ -0.71
CPSF7-212ENST00000489728 IKZF3Q9UKT9 509 aa10.63□□□□□ -0.71
CPSF7-212ENST00000489728 RAB21Q9UL25 225 aa10.63□□□□□ -0.71
CPSF7-212ENST00000489728 RNF112Q9ULX5 631 aa10.63□□□□□ -0.71
CPSF7-212ENST00000489728 TMCO1Q9UM00 188 aa10.63□□□□□ -0.71
CPSF7-212ENST00000489728 PCM1Q15154 2024 aa10.63□□□□□ -0.71
CPSF7-212ENST00000489728 EPG5Q9HCE0 2579 aa10.63□□□□□ -0.71
CPSF7-212ENST00000489728 URB1O60287 2271 aaKnown RBP10.62□□□□□ -0.71
CPSF7-212ENST00000489728 KCNE1BA0A087WTH5 132 aa10.62□□□□□ -0.71
CPSF7-212ENST00000489728 TRIM49D1C9J1S8 452 aa10.62□□□□□ -0.71
CPSF7-212ENST00000489728 ZZEF1O43149 2961 aa10.62□□□□□ -0.71
CPSF7-212ENST00000489728 CTSVO60911 334 aa10.62□□□□□ -0.71
CPSF7-212ENST00000489728 TIAF1O95411 115 aa10.62□□□□□ -0.71
CPSF7-212ENST00000489728 GUCA1CO95843 209 aa10.62□□□□□ -0.71
CPSF7-212ENST00000489728 S100BP04271 92 aaPredicted RBP10.62□□□□□ -0.71
CPSF7-212ENST00000489728 KLK3P07288 261 aaPredicted RBP10.62□□□□□ -0.71
CPSF7-212ENST00000489728 NUDT17P0C025 328 aa10.62□□□□□ -0.71
CPSF7-212ENST00000489728 CCNYL3P0C7X3 344 aa10.62□□□□□ -0.71
CPSF7-212ENST00000489728 NPPBP16860 134 aa10.62□□□□□ -0.71
CPSF7-212ENST00000489728 GCAP28676 217 aa10.62□□□□□ -0.71
CPSF7-212ENST00000489728 GRK3P35626 688 aa10.62□□□□□ -0.71
CPSF7-212ENST00000489728 GCGRP47871 477 aa10.62□□□□□ -0.71
CPSF7-212ENST00000489728 SLC6A12P48065 614 aa10.62□□□□□ -0.71
CPSF7-212ENST00000489728 ARSFP54793 590 aa10.62□□□□□ -0.71
CPSF7-212ENST00000489728 RPS15AP62244 130 aaKnown RBP10.62□□□□□ -0.71
CPSF7-212ENST00000489728 DLG1Q12959 904 aa10.62□□□□□ -0.71
CPSF7-212ENST00000489728 TSTA3Q13630 321 aaPredicted RBP10.62□□□□□ -0.71
CPSF7-212ENST00000489728 GRM7Q14831 915 aa10.62□□□□□ -0.71
CPSF7-212ENST00000489728 OR4D1Q15615 310 aa10.62□□□□□ -0.71
CPSF7-212ENST00000489728 PTCHD3Q3KNS1 767 aa10.62□□□□□ -0.71
CPSF7-212ENST00000489728 RHBDD2Q6NTF9 364 aa10.62□□□□□ -0.71
CPSF7-212ENST00000489728 ZNF517Q6ZMY9 492 aaPredicted RBP10.62□□□□□ -0.71
CPSF7-212ENST00000489728 SPNS2Q8IVW8 549 aa10.62□□□□□ -0.71
CPSF7-212ENST00000489728 RIBC1Q8N443 379 aaPredicted RBP10.62□□□□□ -0.71
CPSF7-212ENST00000489728 MREGQ8N565 214 aa10.62□□□□□ -0.71
CPSF7-212ENST00000489728 TBC1D19Q8N5T2 526 aa10.62□□□□□ -0.71
CPSF7-212ENST00000489728 IL22RA1Q8N6P7 574 aa10.62□□□□□ -0.71
CPSF7-212ENST00000489728 UHMK1Q8TAS1 419 aaKnown RBP10.62□□□□□ -0.71
CPSF7-212ENST00000489728 UBTD2Q8WUN7 234 aa10.62□□□□□ -0.71
CPSF7-212ENST00000489728 PTERQ96BW5 349 aa10.62□□□□□ -0.71
CPSF7-212ENST00000489728 TSNARE1Q96NA8 513 aa10.62□□□□□ -0.71
CPSF7-212ENST00000489728 DCBLD2Q96PD2 775 aa10.62□□□□□ -0.71
CPSF7-212ENST00000489728 ATOH8Q96SQ7 321 aa10.62□□□□□ -0.71
CPSF7-212ENST00000489728 SELENOSQ9BQE4 189 aa10.62□□□□□ -0.71
CPSF7-212ENST00000489728 NDC1Q9BTX1 674 aa10.62□□□□□ -0.71
CPSF7-212ENST00000489728 SARGQ9BW04 601 aa10.62□□□□□ -0.71
CPSF7-212ENST00000489728 ATG10Q9H0Y0 220 aa10.62□□□□□ -0.71
CPSF7-212ENST00000489728 ACTR5Q9H9F9 607 aaPredicted RBP10.62□□□□□ -0.71
CPSF7-212ENST00000489728 GPRC5BQ9NZH0 403 aa10.62□□□□□ -0.71
CPSF7-212ENST00000489728 PADI1Q9ULC6 663 aa10.62□□□□□ -0.71
CPSF7-212ENST00000489728 KCNE2Q9Y6J6 123 aa10.62□□□□□ -0.71
CPSF7-212ENST00000489728 CFAP47Q6ZTR5 3102 aa10.61□□□□□ -0.71
CPSF7-212ENST00000489728 ZNF749O43361 778 aa10.61□□□□□ -0.71
CPSF7-212ENST00000489728 CDH16O75309 829 aa10.61□□□□□ -0.71
CPSF7-212ENST00000489728 RECKO95980 971 aa10.61□□□□□ -0.71
CPSF7-212ENST00000489728 CD63P08962 238 aa10.61□□□□□ -0.71
CPSF7-212ENST00000489728 RBP1P09455 135 aa10.61□□□□□ -0.71
CPSF7-212ENST00000489728 ZNF28P17035 718 aa10.61□□□□□ -0.71
CPSF7-212ENST00000489728 RORAP35398 523 aa10.61□□□□□ -0.71
CPSF7-212ENST00000489728 HSD17B3P37058 310 aa10.61□□□□□ -0.71
CPSF7-212ENST00000489728 CCR8P51685 355 aa10.61□□□□□ -0.71
CPSF7-212ENST00000489728 ERCC6LQ2NKX8 1250 aa10.61□□□□□ -0.71
CPSF7-212ENST00000489728 ZXDCQ2QGD7 858 aaPredicted RBP10.61□□□□□ -0.71
CPSF7-212ENST00000489728 FAM214AQ32MH5 1076 aa10.61□□□□□ -0.71
CPSF7-212ENST00000489728 CRTC2Q53ET0 693 aaPredicted RBP10.61□□□□□ -0.71
CPSF7-212ENST00000489728 MANEAQ5SRI9 462 aa10.61□□□□□ -0.71
CPSF7-212ENST00000489728 GARNL3Q5VVW2 1013 aa10.61□□□□□ -0.71
CPSF7-212ENST00000489728 LRRC70Q7Z2Q7 622 aa10.61□□□□□ -0.71
CPSF7-212ENST00000489728 TIPARPQ7Z3E1 657 aaKnown RBP10.61□□□□□ -0.71
CPSF7-212ENST00000489728 THOC6Q86W42 341 aaKnown RBP10.61□□□□□ -0.71
CPSF7-212ENST00000489728 FAM20CQ8IXL6 584 aa10.61□□□□□ -0.71
CPSF7-212ENST00000489728 DSELQ8IZU8 1212 aa10.61□□□□□ -0.71
CPSF7-212ENST00000489728 SPATA6LQ8N4H0 392 aa10.61□□□□□ -0.71
CPSF7-212ENST00000489728 TTC29Q8NA56 475 aaPredicted RBP10.61□□□□□ -0.71
CPSF7-212ENST00000489728 GALNT6Q8NCL4 622 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms