RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 TMEM198Q66K66 360 aa20.12■□□□□ 0.81
SND1-214ENST00000489417 HIST2H2AA3Q6FI13 130 aa20.12■□□□□ 0.81
SND1-214ENST00000489417 MED27Q6P2C8 311 aa20.12■□□□□ 0.81
SND1-214ENST00000489417 TRIM46Q7Z4K8 759 aa20.12■□□□□ 0.81
SND1-214ENST00000489417 ARL14Q8N4G2 192 aa20.12■□□□□ 0.81
SND1-214ENST00000489417 MTFMTQ96DP5 389 aaKnown RBP20.12■□□□□ 0.81
SND1-214ENST00000489417 TWSG1Q9GZX9 223 aa20.12■□□□□ 0.81
SND1-214ENST00000489417 C11orf16Q9NQ32 467 aa20.12■□□□□ 0.81
SND1-214ENST00000489417 CUEDC1Q9NWM3 386 aaPredicted RBP20.12■□□□□ 0.81
SND1-214ENST00000489417 GIMAP2Q9UG22 337 aa20.12■□□□□ 0.81
SND1-214ENST00000489417 PCDHGA11Q9Y5H2 935 aa20.12■□□□□ 0.81
SND1-214ENST00000489417 SERTM1A2A2V5 107 aa20.11■□□□□ 0.81
SND1-214ENST00000489417 ISM1B1AKI9 464 aa20.11■□□□□ 0.81
SND1-214ENST00000489417 RGS14O43566 566 aa20.11■□□□□ 0.81
SND1-214ENST00000489417 PRR35P0CG20 571 aa20.11■□□□□ 0.81
SND1-214ENST00000489417 LBPP18428 481 aa20.11■□□□□ 0.81
SND1-214ENST00000489417 FASLGP48023 281 aa20.11■□□□□ 0.81
SND1-214ENST00000489417 CCR8P51685 355 aa20.11■□□□□ 0.81
SND1-214ENST00000489417 YBX1P67809 324 aaKnown RBP20.11■□□□□ 0.81
SND1-214ENST00000489417 ABATP80404 500 aa20.11■□□□□ 0.81
SND1-214ENST00000489417 ZNF33BQ06732 778 aa20.11■□□□□ 0.81
SND1-214ENST00000489417 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.11■□□□□ 0.81
SND1-214ENST00000489417 FAM91A1Q658Y4 838 aa20.11■□□□□ 0.81
SND1-214ENST00000489417 Q6ZSR9 355 aa20.11■□□□□ 0.81
SND1-214ENST00000489417 CCDC121Q6ZUS5 278 aa20.11■□□□□ 0.81
SND1-214ENST00000489417 C17orf82Q86X59 251 aaPredicted RBP20.11■□□□□ 0.81
SND1-214ENST00000489417 GBP7Q8N8V2 638 aaPredicted RBP20.11■□□□□ 0.81
SND1-214ENST00000489417 ABHD11Q8NFV4 315 aa20.11■□□□□ 0.81
SND1-214ENST00000489417 WDR20Q8TBZ3 569 aa20.11■□□□□ 0.81
SND1-214ENST00000489417 REPS1Q96D71 796 aa20.11■□□□□ 0.81
SND1-214ENST00000489417 CATSPER2Q96P56 530 aa20.11■□□□□ 0.81
SND1-214ENST00000489417 ARMCX1Q9P291 453 aa20.11■□□□□ 0.81
SND1-214ENST00000489417 G3BP2Q9UN86 482 aaKnown RBP20.11■□□□□ 0.81
SND1-214ENST00000489417 TDRD6O60522 2096 aaKnown RBP20.11■□□□□ 0.81
SND1-214ENST00000489417 A0A1B0GTQ1 180 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 PIPSLA2A3N6 862 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 OR6C74A6NCV1 312 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 UBDO15205 165 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 PEX11AO75192 247 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 UBOX5O94941 541 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 EPHA8P29322 1005 aaPredicted RBP20.1■□□□□ 0.81
SND1-214ENST00000489417 CMPK1P30085 196 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 NEK2P51955 445 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 MEF2AQ02078 507 aaPredicted RBP20.1■□□□□ 0.81
SND1-214ENST00000489417 UBAP2LQ14157 1087 aaKnown RBP20.1■□□□□ 0.81
SND1-214ENST00000489417 KIR2DS3Q14952 304 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 NR6A1Q15406 480 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 IMPG1Q17R60 797 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 CHSY3Q70JA7 882 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 FAM129CQ86XR2 697 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 LAS2Q8IYD9 372 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 KRT78Q8N1N4 520 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 SLC25A45Q8N413 288 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 OR2L3Q8NG85 312 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 OR7G3Q8NG95 312 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 UBE2E3Q969T4 207 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 SLC22A18Q96BI1 424 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 PPP3R2Q96LZ3 170 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 AIF1LQ9BQI0 150 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 SPNS1Q9H2V7 528 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 ZNF385DQ9H6B1 395 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 UCK1Q9HA47 277 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 CAPN10Q9HC96 672 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 MRPS30Q9NP92 439 aaKnown RBP20.1■□□□□ 0.81
SND1-214ENST00000489417 FSCN3Q9NQT6 498 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 CCL27Q9Y4X3 112 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 GON4LQ3T8J9 2241 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 VCANP13611 3396 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 PCNAP12004 261 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 POLR2CP19387 275 aaPredicted RBP20.1■□□□□ 0.81
SND1-214ENST00000489417 CXCR2P25025 360 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 NUBP1P53384 320 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 REEP5Q00765 189 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 CSTF3Q12996 717 aaKnown RBP20.1■□□□□ 0.81
SND1-214ENST00000489417 SF1Q15637 639 aaKnown RBP20.1■□□□□ 0.81
SND1-214ENST00000489417 LPAL2Q16609 132 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 HLA-BQ31612 363 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 C14orf28Q4W4Y0 310 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 ATP6AP1LQ52LC2 224 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 C10orf62Q5T681 223 aaPredicted RBP20.1■□□□□ 0.81
SND1-214ENST00000489417 OGFOD2Q6N063 350 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 SPATA19Q7Z5L4 167 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 GPR156Q8NFN8 814 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 OR4K1Q8NGD4 311 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 OR10G6Q8NH81 332 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 MARK4Q96L34 752 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 CCDC106Q9BWC9 280 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 ACPTQ9BZG2 426 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 SLC6A14Q9UN76 642 aa20.1■□□□□ 0.81
SND1-214ENST00000489417 H7BY64 318 aa20.09■□□□□ 0.81
SND1-214ENST00000489417 LSM1O15116 133 aaKnown RBP20.09■□□□□ 0.81
SND1-214ENST00000489417 YKT6O15498 198 aa20.09■□□□□ 0.81
SND1-214ENST00000489417 DFNA5O60443 496 aa20.09■□□□□ 0.81
SND1-214ENST00000489417 KIAA0754O94854 1291 aa20.09■□□□□ 0.81
SND1-214ENST00000489417 HMGCS1Q01581 520 aa20.09■□□□□ 0.81
SND1-214ENST00000489417 BIRC2Q13490 618 aa20.09■□□□□ 0.81
SND1-214ENST00000489417 DDX39BQ13838 428 aaKnown RBP20.09■□□□□ 0.81
SND1-214ENST00000489417 GALNTL6Q49A17 601 aa20.09■□□□□ 0.81
SND1-214ENST00000489417 C6orf136Q5SQH8 315 aa20.09■□□□□ 0.81
SND1-214ENST00000489417 C6orf132Q5T0Z8 1188 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms