RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 EDDM13A0A1B0GTR0 161 aa3.05□□□□□ -1.92
RFC4-213ENST00000489028 TCRBV21S2A2A0A5A6 115 aa3.05□□□□□ -1.92
RFC4-213ENST00000489028 CASTOR2A6NHX0 329 aa3.05□□□□□ -1.92
RFC4-213ENST00000489028 KPNA7A9QM74 516 aa3.05□□□□□ -1.92
RFC4-213ENST00000489028 PI4K2BG5E9Z4 385 aa3.05□□□□□ -1.92
RFC4-213ENST00000489028 TADA2AO75478 443 aa3.05□□□□□ -1.92
RFC4-213ENST00000489028 CSN3P07498 182 aa3.05□□□□□ -1.92
RFC4-213ENST00000489028 IRF2P14316 349 aa3.05□□□□□ -1.92
RFC4-213ENST00000489028 PRKACGP22612 351 aa3.05□□□□□ -1.92
RFC4-213ENST00000489028 RBMS1P29558 406 aaKnown RBP3.05□□□□□ -1.92
RFC4-213ENST00000489028 LMAN1P49257 510 aa3.05□□□□□ -1.92
RFC4-213ENST00000489028 CLDN15P56746 228 aa3.05□□□□□ -1.92
RFC4-213ENST00000489028 HUNKP57058 714 aa3.05□□□□□ -1.92
RFC4-213ENST00000489028 ALCAMQ13740 583 aa3.05□□□□□ -1.92
RFC4-213ENST00000489028 LY6DQ14210 128 aa3.05□□□□□ -1.92
RFC4-213ENST00000489028 EFTUD2Q15029 972 aaKnown RBP eCLIP3.05□□□□□ -1.92
RFC4-213ENST00000489028 ZNF239Q16600 458 aaKnown RBP3.05□□□□□ -1.92
RFC4-213ENST00000489028 PHKG1Q16816 387 aa3.05□□□□□ -1.92
RFC4-213ENST00000489028 GPRIN3Q6ZVF9 776 aa3.05□□□□□ -1.92
RFC4-213ENST00000489028 CENPVQ7Z7K6 275 aaPredicted RBP3.05□□□□□ -1.92
RFC4-213ENST00000489028 LYG1Q8N1E2 194 aa3.05□□□□□ -1.92
RFC4-213ENST00000489028 Q8NBF4 154 aa3.05□□□□□ -1.92
RFC4-213ENST00000489028 AQP11Q8NBQ7 271 aa3.05□□□□□ -1.92
RFC4-213ENST00000489028 SLC37A3Q8NCC5 494 aa3.05□□□□□ -1.92
RFC4-213ENST00000489028 MAPK15Q8TD08 544 aa3.05□□□□□ -1.92
RFC4-213ENST00000489028 ATL1Q8WXF7 558 aa3.05□□□□□ -1.92
RFC4-213ENST00000489028 SECISBP2LQ93073 1101 aaKnown RBP3.05□□□□□ -1.92
RFC4-213ENST00000489028 ERP27Q96DN0 273 aa3.05□□□□□ -1.92
RFC4-213ENST00000489028 SPAG5Q96R06 1193 aa3.05□□□□□ -1.92
RFC4-213ENST00000489028 KRTAP4-4Q9BYR3 166 aa3.05□□□□□ -1.92
RFC4-213ENST00000489028 CDH20Q9HBT6 801 aa3.05□□□□□ -1.92
RFC4-213ENST00000489028 CHST11Q9NPF2 352 aa3.05□□□□□ -1.92
RFC4-213ENST00000489028 CPSF3Q9UKF6 684 aaKnown RBP3.05□□□□□ -1.92
RFC4-213ENST00000489028 CSNK1G3Q9Y6M4 447 aa3.05□□□□□ -1.92
RFC4-213ENST00000489028 A0A087WUV0 522 aaPredicted RBP3.04□□□□□ -1.92
RFC4-213ENST00000489028 A0A1W2PPR1 153 aa3.04□□□□□ -1.92
RFC4-213ENST00000489028 TRBC2A0A5B9 178 aa3.04□□□□□ -1.92
RFC4-213ENST00000489028 O00370 1275 aa3.04□□□□□ -1.92
RFC4-213ENST00000489028 IDH3BO43837 385 aa3.04□□□□□ -1.92
RFC4-213ENST00000489028 CELF2O95319 508 aaKnown RBP3.04□□□□□ -1.92
RFC4-213ENST00000489028 C22orf31O95567 290 aa3.04□□□□□ -1.92
RFC4-213ENST00000489028 BAG3O95817 575 aa3.04□□□□□ -1.92
RFC4-213ENST00000489028 IGHEP01854 428 aa3.04□□□□□ -1.92
RFC4-213ENST00000489028 ATP5BP06576 529 aaKnown RBP3.04□□□□□ -1.92
RFC4-213ENST00000489028 AKR1B1P15121 316 aa3.04□□□□□ -1.92
RFC4-213ENST00000489028 TLX1P31314 330 aaPredicted RBP3.04□□□□□ -1.92
RFC4-213ENST00000489028 CYCSP99999 105 aaKnown RBP3.04□□□□□ -1.92
RFC4-213ENST00000489028 KLC1Q07866 573 aa3.04□□□□□ -1.92
RFC4-213ENST00000489028 PTPRCAPQ14761 206 aa3.04□□□□□ -1.92
RFC4-213ENST00000489028 MOGAT2Q3SYC2 334 aa3.04□□□□□ -1.92
RFC4-213ENST00000489028 OR4A47Q6IF82 309 aa3.04□□□□□ -1.92
RFC4-213ENST00000489028 SUSD1Q6UWL2 747 aa3.04□□□□□ -1.92
RFC4-213ENST00000489028 KIF6Q6ZMV9 814 aa3.04□□□□□ -1.92
RFC4-213ENST00000489028 Q8N377 158 aa3.04□□□□□ -1.92
RFC4-213ENST00000489028 ANKRD13CQ8N6S4 541 aa3.04□□□□□ -1.92
RFC4-213ENST00000489028 POGLUT1Q8NBL1 392 aa3.04□□□□□ -1.92
RFC4-213ENST00000489028 SLC4A11Q8NBS3 891 aa3.04□□□□□ -1.92
RFC4-213ENST00000489028 ARSGQ96EG1 525 aa3.04□□□□□ -1.92
RFC4-213ENST00000489028 OTUB1Q96FW1 271 aaPredicted RBP3.04□□□□□ -1.92
RFC4-213ENST00000489028 FEVQ99581 238 aa3.04□□□□□ -1.92
RFC4-213ENST00000489028 LPAR4Q99677 370 aa3.04□□□□□ -1.92
RFC4-213ENST00000489028 NKX3-1Q99801 234 aaPredicted RBP3.04□□□□□ -1.92
RFC4-213ENST00000489028 ZMYND12Q9H0C1 365 aa3.04□□□□□ -1.92
RFC4-213ENST00000489028 DNAJC4Q9NNZ3 241 aa3.04□□□□□ -1.92
RFC4-213ENST00000489028 MORF4L1Q9UBU8 362 aa3.04□□□□□ -1.92
RFC4-213ENST00000489028 C19orf25Q9UFG5 118 aaPredicted RBP3.04□□□□□ -1.92
RFC4-213ENST00000489028 MAN1B1Q9UKM7 699 aa3.04□□□□□ -1.92
RFC4-213ENST00000489028 CSAG2Q9Y5P2 127 aa3.04□□□□□ -1.92
RFC4-213ENST00000489028 TEX28O15482 410 aa3.03□□□□□ -1.92
RFC4-213ENST00000489028 ATP6AP2O75787 350 aa3.03□□□□□ -1.92
RFC4-213ENST00000489028 ATP1B1P05026 303 aa3.03□□□□□ -1.92
RFC4-213ENST00000489028 ACADSP16219 412 aa3.03□□□□□ -1.92
RFC4-213ENST00000489028 EPCAMP16422 314 aa3.03□□□□□ -1.92
RFC4-213ENST00000489028 CAPN2P17655 700 aa3.03□□□□□ -1.92
RFC4-213ENST00000489028 IL11P20809 199 aa3.03□□□□□ -1.92
RFC4-213ENST00000489028 ALDH1B1P30837 517 aa3.03□□□□□ -1.92
RFC4-213ENST00000489028 HOXC13P31276 330 aa3.03□□□□□ -1.92
RFC4-213ENST00000489028 SOX3P41225 446 aa3.03□□□□□ -1.92
RFC4-213ENST00000489028 DNA2P51530 1060 aa3.03□□□□□ -1.92
RFC4-213ENST00000489028 ALDH3A2P51648 485 aa3.03□□□□□ -1.92
RFC4-213ENST00000489028 ELAVL2Q12926 359 aaKnown RBP3.03□□□□□ -1.92
RFC4-213ENST00000489028 RALGDSQ12967 914 aa3.03□□□□□ -1.92
RFC4-213ENST00000489028 FASTKD3Q14CZ7 662 aaKnown RBP3.03□□□□□ -1.92
RFC4-213ENST00000489028 NPTX1Q15818 432 aa3.03□□□□□ -1.92
RFC4-213ENST00000489028 CFAP58Q5T655 872 aa3.03□□□□□ -1.92
RFC4-213ENST00000489028 ERMARDQ5T6L9 678 aa3.03□□□□□ -1.92
RFC4-213ENST00000489028 LYSMD4Q5XG99 296 aa3.03□□□□□ -1.92
RFC4-213ENST00000489028 C16orf54Q6UWD8 224 aa3.03□□□□□ -1.92
RFC4-213ENST00000489028 ZBTB49Q6ZSB9 765 aa3.03□□□□□ -1.92
RFC4-213ENST00000489028 LMNTD2Q8IXW0 634 aa3.03□□□□□ -1.92
RFC4-213ENST00000489028 OR8H2Q8N162 312 aa3.03□□□□□ -1.92
RFC4-213ENST00000489028 AMER3Q8N944 861 aa3.03□□□□□ -1.92
RFC4-213ENST00000489028 OR7A2PQ8NGA2 310 aa3.03□□□□□ -1.92
RFC4-213ENST00000489028 MIPOL1Q8TD10 442 aa3.03□□□□□ -1.92
RFC4-213ENST00000489028 C2orf48Q96LS8 159 aa3.03□□□□□ -1.92
RFC4-213ENST00000489028 MAP3K3Q99759 626 aa3.03□□□□□ -1.92
RFC4-213ENST00000489028 GPATCH1Q9BRR8 931 aaKnown RBP3.03□□□□□ -1.92
RFC4-213ENST00000489028 FAM49AQ9H0Q0 323 aaPredicted RBP3.03□□□□□ -1.92
RFC4-213ENST00000489028 MED20Q9H944 212 aa3.03□□□□□ -1.92
RFC4-213ENST00000489028 BCCIPQ9P287 314 aaKnown RBP eCLIP3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms