RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 C8GP07360 202 aa16.96■□□□□ 0.31
ITGB1-215ENST00000488494 UMODP07911 640 aa16.96■□□□□ 0.31
ITGB1-215ENST00000488494 CD63P08962 238 aa16.96■□□□□ 0.31
ITGB1-215ENST00000488494 CASRP41180 1078 aa16.96■□□□□ 0.31
ITGB1-215ENST00000488494 PGGT1BP53609 377 aa16.96■□□□□ 0.31
ITGB1-215ENST00000488494 TBPL1P62380 186 aa16.96■□□□□ 0.31
ITGB1-215ENST00000488494 PRDX1Q06830 199 aaKnown RBP16.96■□□□□ 0.31
ITGB1-215ENST00000488494 KLRB1Q12918 225 aa16.96■□□□□ 0.31
ITGB1-215ENST00000488494 ZNF425Q6IV72 752 aa16.96■□□□□ 0.31
ITGB1-215ENST00000488494 MBOAT1Q6ZNC8 495 aa16.96■□□□□ 0.31
ITGB1-215ENST00000488494 MED25Q71SY5 747 aa16.96■□□□□ 0.31
ITGB1-215ENST00000488494 ADCK2Q7Z695 626 aa16.96■□□□□ 0.31
ITGB1-215ENST00000488494 LRRC56Q8IYG6 542 aaPredicted RBP16.96■□□□□ 0.31
ITGB1-215ENST00000488494 C10orf90Q96M02 699 aa16.96■□□□□ 0.31
ITGB1-215ENST00000488494 CCDC177Q9NQR7 707 aaPredicted RBP16.96■□□□□ 0.31
ITGB1-215ENST00000488494 ZFATQ9P243 1243 aa16.96■□□□□ 0.31
ITGB1-215ENST00000488494 STOX2Q9P2F5 926 aaPredicted RBP16.96■□□□□ 0.31
ITGB1-215ENST00000488494 CORO1CQ9ULV4 474 aaPredicted RBP16.96■□□□□ 0.31
ITGB1-215ENST00000488494 PSAT1Q9Y617 370 aa16.96■□□□□ 0.31
ITGB1-215ENST00000488494 MAU2Q9Y6X3 613 aa16.96■□□□□ 0.31
ITGB1-215ENST00000488494 ASH1LQ9NR48 2969 aaKnown RBP16.95■□□□□ 0.3
ITGB1-215ENST00000488494 H0YGG7 62 aa16.95■□□□□ 0.3
ITGB1-215ENST00000488494 HAT1O14929 419 aa16.95■□□□□ 0.3
ITGB1-215ENST00000488494 WISP1O95388 367 aa16.95■□□□□ 0.3
ITGB1-215ENST00000488494 TSPAN12O95859 305 aa16.95■□□□□ 0.3
ITGB1-215ENST00000488494 EZRP15311 586 aaKnown RBP16.95■□□□□ 0.3
ITGB1-215ENST00000488494 FDXRP22570 491 aa16.95■□□□□ 0.3
ITGB1-215ENST00000488494 CASQ1P31415 396 aa16.95■□□□□ 0.3
ITGB1-215ENST00000488494 OR1D4P47884 311 aa16.95■□□□□ 0.3
ITGB1-215ENST00000488494 RRADP55042 308 aa16.95■□□□□ 0.3
ITGB1-215ENST00000488494 ARF3P61204 181 aaPredicted RBP16.95■□□□□ 0.3
ITGB1-215ENST00000488494 PDAP1Q13442 181 aaKnown RBP16.95■□□□□ 0.3
ITGB1-215ENST00000488494 FRG1Q14331 258 aaKnown RBP16.95■□□□□ 0.3
ITGB1-215ENST00000488494 SSPNQ14714 243 aa16.95■□□□□ 0.3
ITGB1-215ENST00000488494 HECTD2Q5U5R9 776 aa16.95■□□□□ 0.3
ITGB1-215ENST00000488494 PPP1R32Q7Z5V6 425 aa16.95■□□□□ 0.3
ITGB1-215ENST00000488494 PALM2Q8IXS6 379 aa16.95■□□□□ 0.3
ITGB1-215ENST00000488494 ZBED8Q8IZ13 594 aa16.95■□□□□ 0.3
ITGB1-215ENST00000488494 CSNK1A1LQ8N752 337 aa16.95■□□□□ 0.3
ITGB1-215ENST00000488494 TMEM102Q8N9M5 508 aaPredicted RBP16.95■□□□□ 0.3
ITGB1-215ENST00000488494 SPATA4Q8NEY3 305 aa16.95■□□□□ 0.3
ITGB1-215ENST00000488494 OLFM1Q99784 485 aa16.95■□□□□ 0.3
ITGB1-215ENST00000488494 DPH5Q9H2P9 285 aa16.95■□□□□ 0.3
ITGB1-215ENST00000488494 WDR54Q9H977 334 aa16.95■□□□□ 0.3
ITGB1-215ENST00000488494 CUEDC1Q9NWM3 386 aaPredicted RBP16.95■□□□□ 0.3
ITGB1-215ENST00000488494 PDE10AQ9Y233 779 aa16.95■□□□□ 0.3
ITGB1-215ENST00000488494 PCDHGA9Q9Y5G4 932 aaKnown RBP16.95■□□□□ 0.3
ITGB1-215ENST00000488494 FAM187AA6NFU0 413 aa16.94■□□□□ 0.3
ITGB1-215ENST00000488494 A6NL46 340 aa16.94■□□□□ 0.3
ITGB1-215ENST00000488494 E7ESA3 106 aa16.94■□□□□ 0.3
ITGB1-215ENST00000488494 NDC80O14777 642 aa16.94■□□□□ 0.3
ITGB1-215ENST00000488494 RAD51CO43502 376 aa16.94■□□□□ 0.3
ITGB1-215ENST00000488494 CEACAM4O75871 244 aa16.94■□□□□ 0.3
ITGB1-215ENST00000488494 PIM1P11309 404 aaPredicted RBP16.94■□□□□ 0.3
ITGB1-215ENST00000488494 IL2P60568 153 aa16.94■□□□□ 0.3
ITGB1-215ENST00000488494 ETF1P62495 437 aaKnown RBP16.94■□□□□ 0.3
ITGB1-215ENST00000488494 ABATP80404 500 aa16.94■□□□□ 0.3
ITGB1-215ENST00000488494 MGAT5Q09328 741 aa16.94■□□□□ 0.3
ITGB1-215ENST00000488494 RAPSNQ13702 412 aa16.94■□□□□ 0.3
ITGB1-215ENST00000488494 PHKG1Q16816 387 aa16.94■□□□□ 0.3
ITGB1-215ENST00000488494 PRTGQ2VWP7 1150 aa16.94■□□□□ 0.3
ITGB1-215ENST00000488494 FAM214AQ32MH5 1076 aa16.94■□□□□ 0.3
ITGB1-215ENST00000488494 PRAMEF13Q5VWM6 474 aa16.94■□□□□ 0.3
ITGB1-215ENST00000488494 FAM45BPQ6NSW5 357 aa16.94■□□□□ 0.3
ITGB1-215ENST00000488494 FBXO42Q6P3S6 717 aa16.94■□□□□ 0.3
ITGB1-215ENST00000488494 SYT10Q6XYQ8 523 aa16.94■□□□□ 0.3
ITGB1-215ENST00000488494 CAPN12Q6ZSI9 719 aa16.94■□□□□ 0.3
ITGB1-215ENST00000488494 SHISA6Q6ZSJ9 500 aa16.94■□□□□ 0.3
ITGB1-215ENST00000488494 OVCH1Q7RTY7 1134 aa16.94■□□□□ 0.3
ITGB1-215ENST00000488494 TEX19Q8NA77 164 aa16.94■□□□□ 0.3
ITGB1-215ENST00000488494 BBOF1Q8ND07 529 aa16.94■□□□□ 0.3
ITGB1-215ENST00000488494 FDCSPQ8NFU4 85 aa16.94■□□□□ 0.3
ITGB1-215ENST00000488494 FAM45AQ8TCE6 357 aa16.94■□□□□ 0.3
ITGB1-215ENST00000488494 MCOLN3Q8TDD5 553 aa16.94■□□□□ 0.3
ITGB1-215ENST00000488494 RERGQ96A58 199 aaPredicted RBP16.94■□□□□ 0.3
ITGB1-215ENST00000488494 PTERQ96BW5 349 aa16.94■□□□□ 0.3
ITGB1-215ENST00000488494 CABS1Q96KC9 395 aa16.94■□□□□ 0.3
ITGB1-215ENST00000488494 IP6K3Q96PC2 410 aa16.94■□□□□ 0.3
ITGB1-215ENST00000488494 SPSB2Q99619 263 aa16.94■□□□□ 0.3
ITGB1-215ENST00000488494 SOX17Q9H6I2 414 aaPredicted RBP16.94■□□□□ 0.3
ITGB1-215ENST00000488494 PARVBQ9HBI1 364 aa16.94■□□□□ 0.3
ITGB1-215ENST00000488494 P4HTMQ9NXG6 502 aa16.94■□□□□ 0.3
ITGB1-215ENST00000488494 UTP6Q9NYH9 597 aaKnown RBP16.94■□□□□ 0.3
ITGB1-215ENST00000488494 G3BP2Q9UN86 482 aaKnown RBP16.94■□□□□ 0.3
ITGB1-215ENST00000488494 PEX12O00623 359 aa16.93■□□□□ 0.3
ITGB1-215ENST00000488494 ONECUT2O95948 504 aa16.93■□□□□ 0.3
ITGB1-215ENST00000488494 CSRP3P50461 194 aa16.93■□□□□ 0.3
ITGB1-215ENST00000488494 CALCOCO2Q13137 446 aa16.93■□□□□ 0.3
ITGB1-215ENST00000488494 NKG7Q16617 165 aa16.93■□□□□ 0.3
ITGB1-215ENST00000488494 MUM1Q2TAK8 710 aa16.93■□□□□ 0.3
ITGB1-215ENST00000488494 HKDC1Q2TB90 917 aa16.93■□□□□ 0.3
ITGB1-215ENST00000488494 DCAF10Q5QP82 559 aa16.93■□□□□ 0.3
ITGB1-215ENST00000488494 PLD3Q8IV08 490 aa16.93■□□□□ 0.3
ITGB1-215ENST00000488494 CCDC138Q96M89 665 aa16.93■□□□□ 0.3
ITGB1-215ENST00000488494 ERP44Q9BS26 406 aa16.93■□□□□ 0.3
ITGB1-215ENST00000488494 NUDT9Q9BW91 350 aa16.93■□□□□ 0.3
ITGB1-215ENST00000488494 SLC26A1Q9H2B4 701 aa16.93■□□□□ 0.3
ITGB1-215ENST00000488494 CLMPQ9H6B4 373 aa16.93■□□□□ 0.3
ITGB1-215ENST00000488494 MLXIPLQ9NP71 852 aa16.93■□□□□ 0.3
ITGB1-215ENST00000488494 GPR83Q9NYM4 423 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms