RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 THSD1Q9NS62 852 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 INTS7Q9NVH2 962 aaKnown RBP10.61□□□□□ -0.71
UBE4B-210ENST00000488228 TMEM216Q9P0N5 145 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 RARRES3Q9UL19 164 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 SLC22A14Q9Y267 594 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 CCDC88CQ9P219 2028 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 PKD1L2Q7Z442 2459 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 A0A0J9YVX5 310 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 LRRC14BA6NHZ5 514 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 SYCE1LA8MT33 242 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 E7EQ34 232 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 H7BY64 318 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 HAT1O14929 419 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 POLR1CO15160 346 aaPredicted RBP10.6□□□□□ -0.71
UBE4B-210ENST00000488228 MAP3K7O43318 606 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 TLX3O43711 291 aaPredicted RBP10.6□□□□□ -0.71
UBE4B-210ENST00000488228 IPO13O94829 963 aaKnown RBP10.6□□□□□ -0.71
UBE4B-210ENST00000488228 STATHP02808 62 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 SBK3P0C264 359 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 COL6A2P12110 1019 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 NPPBP16860 134 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 ABATP80404 500 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 MEF2AQ02078 507 aaPredicted RBP10.6□□□□□ -0.71
UBE4B-210ENST00000488228 SETDB1Q15047 1291 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 PFKFB4Q16877 469 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 CATSPEREQ5SY80 951 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 CEP85LQ5SZL2 805 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 DCAF12Q5T6F0 453 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 PRAMEF17Q5VTA0 474 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 SULT1C3Q6IMI6 304 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 FRMPD2BQ6IN97 320 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 CEACAM20Q6UY09 585 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 SH2D5Q6ZV89 423 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 TMPRSS11BQ86T26 416 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 TRABD2AQ86V40 505 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 ZFAND4Q86XD8 727 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 SRRM1Q8IYB3 904 aaKnown RBP10.6□□□□□ -0.71
UBE4B-210ENST00000488228 TCAIMQ8N3R3 496 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 DNAJC22Q8N4W6 341 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 PTGR2Q8N8N7 351 aaPredicted RBP10.6□□□□□ -0.71
UBE4B-210ENST00000488228 SNX31Q8N9S9 440 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 SLC5A11Q8WWX8 675 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 NEIL2Q969S2 332 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 PRAP1Q96NZ9 151 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 PLCD4Q9BRC7 762 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 HAUS8Q9BT25 410 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 TMEM109Q9BVC6 243 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 ROPN1BQ9BZX4 212 aaPredicted RBP10.6□□□□□ -0.71
UBE4B-210ENST00000488228 SPNS1Q9H2V7 528 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 MRPL46Q9H2W6 279 aaKnown RBP10.6□□□□□ -0.71
UBE4B-210ENST00000488228 C12orf65Q9H3J6 166 aaKnown RBP10.6□□□□□ -0.71
UBE4B-210ENST00000488228 CCDC86Q9H6F5 360 aaKnown RBP10.6□□□□□ -0.71
UBE4B-210ENST00000488228 CNOT10Q9H9A5 744 aaKnown RBP10.6□□□□□ -0.71
UBE4B-210ENST00000488228 ROPN1Q9HAT0 212 aaPredicted RBP10.6□□□□□ -0.71
UBE4B-210ENST00000488228 FBXO8Q9NRD0 319 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 IRAK4Q9NWZ3 460 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 EMCNQ9ULC0 261 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 DYRK1BQ9Y463 629 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 PCDHGA7Q9Y5G6 932 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 PCDHGA3Q9Y5H0 932 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 KLK4Q9Y5K2 254 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 ZFHX4Q86UP3 3567 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 SCN3AQ9NY46 2000 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 DMXL2Q8TDJ6 3036 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 EPG5Q9HCE0 2579 aa10.6□□□□□ -0.71
UBE4B-210ENST00000488228 SEC16AO15027 2179 aa10.59□□□□□ -0.71
UBE4B-210ENST00000488228 LOC105369274A0A096LPK9 316 aa10.59□□□□□ -0.71
UBE4B-210ENST00000488228 LOC102723532A0A0G2JNH3 316 aa10.59□□□□□ -0.71
UBE4B-210ENST00000488228 TEX51A0A1B0GUA7 166 aa10.59□□□□□ -0.71
UBE4B-210ENST00000488228 CCNT2O60583 730 aaKnown RBP10.59□□□□□ -0.71
UBE4B-210ENST00000488228 GLRA3O75311 464 aa10.59□□□□□ -0.71
UBE4B-210ENST00000488228 STK16O75716 305 aa10.59□□□□□ -0.71
UBE4B-210ENST00000488228 SIX3O95343 332 aaPredicted RBP10.59□□□□□ -0.71
UBE4B-210ENST00000488228 RBP1P09455 135 aa10.59□□□□□ -0.71
UBE4B-210ENST00000488228 FGF5P12034 268 aa10.59□□□□□ -0.71
UBE4B-210ENST00000488228 H2AFXP16104 143 aaPredicted RBP10.59□□□□□ -0.71
UBE4B-210ENST00000488228 KRT4P19013 534 aa10.59□□□□□ -0.71
UBE4B-210ENST00000488228 VARSP26640 1264 aaKnown RBP10.59□□□□□ -0.71
UBE4B-210ENST00000488228 ITGA1P56199 1179 aa10.59□□□□□ -0.71
UBE4B-210ENST00000488228 FOXK2Q01167 660 aa10.59□□□□□ -0.71
UBE4B-210ENST00000488228 CDC16Q13042 620 aa10.59□□□□□ -0.71
UBE4B-210ENST00000488228 IL11RAQ14626 422 aa10.59□□□□□ -0.71
UBE4B-210ENST00000488228 NAA25Q14CX7 972 aa10.59□□□□□ -0.71
UBE4B-210ENST00000488228 CDKL4Q5MAI5 379 aa10.59□□□□□ -0.71
UBE4B-210ENST00000488228 TMEM164Q5U3C3 297 aa10.59□□□□□ -0.71
UBE4B-210ENST00000488228 PWWP2BQ6NUJ5 590 aa10.59□□□□□ -0.71
UBE4B-210ENST00000488228 LRRC70Q7Z2Q7 622 aa10.59□□□□□ -0.71
UBE4B-210ENST00000488228 PPP1R3BQ86XI6 285 aa10.59□□□□□ -0.71
UBE4B-210ENST00000488228 TMEM126BQ8IUX1 230 aa10.59□□□□□ -0.71
UBE4B-210ENST00000488228 KLHDC8AQ8IYD2 350 aa10.59□□□□□ -0.71
UBE4B-210ENST00000488228 IQCKQ8N0W5 287 aa10.59□□□□□ -0.71
UBE4B-210ENST00000488228 OR4N4Q8N0Y3 316 aa10.59□□□□□ -0.71
UBE4B-210ENST00000488228 LSMEM2Q8N112 164 aa10.59□□□□□ -0.71
UBE4B-210ENST00000488228 HNRNPLLQ8WVV9 542 aaKnown RBP10.59□□□□□ -0.71
UBE4B-210ENST00000488228 N4BP2L2Q92802 583 aaPredicted RBP10.59□□□□□ -0.71
UBE4B-210ENST00000488228 APOPT1Q96IL0 206 aa10.59□□□□□ -0.71
UBE4B-210ENST00000488228 ZNF578Q96N58 590 aaPredicted RBP10.59□□□□□ -0.71
UBE4B-210ENST00000488228 ZFYVE21Q9BQ24 234 aa10.59□□□□□ -0.71
UBE4B-210ENST00000488228 MRPL57Q9BQC6 102 aaKnown RBP10.59□□□□□ -0.71
UBE4B-210ENST00000488228 SELENOSQ9BQE4 189 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms