RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 CCDC34Q96HJ3 373 aa3.16□□□□□ -1.9
SMC4-219ENST00000487747 OSGEPL1Q9H4B0 414 aa3.16□□□□□ -1.9
SMC4-219ENST00000487747 MYNNQ9NPC7 610 aa3.16□□□□□ -1.9
SMC4-219ENST00000487747 SLC35C2Q9NQQ7 365 aa3.16□□□□□ -1.9
SMC4-219ENST00000487747 DPP3Q9NY33 737 aa3.16□□□□□ -1.9
SMC4-219ENST00000487747 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.16□□□□□ -1.9
SMC4-219ENST00000487747 TSPAN16Q9UKR8 245 aa3.16□□□□□ -1.9
SMC4-219ENST00000487747 WDR83OSQ9Y284 106 aa3.16□□□□□ -1.9
SMC4-219ENST00000487747 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.15□□□□□ -1.91
SMC4-219ENST00000487747 NXPH4O95158 308 aa3.15□□□□□ -1.91
SMC4-219ENST00000487747 PRKAR1AP10644 381 aa3.15□□□□□ -1.91
SMC4-219ENST00000487747 PTGER4P35408 488 aa3.15□□□□□ -1.91
SMC4-219ENST00000487747 MAPK12P53778 367 aa3.15□□□□□ -1.91
SMC4-219ENST00000487747 PSMC6P62333 389 aa3.15□□□□□ -1.91
SMC4-219ENST00000487747 DHODHQ02127 395 aa3.15□□□□□ -1.91
SMC4-219ENST00000487747 ZNF177Q13360 481 aaPredicted RBP3.15□□□□□ -1.91
SMC4-219ENST00000487747 MS4A18Q3C1V0 323 aa3.15□□□□□ -1.91
SMC4-219ENST00000487747 CHMP1BQ7LBR1 199 aa3.15□□□□□ -1.91
SMC4-219ENST00000487747 PHC2Q8IXK0 858 aa3.15□□□□□ -1.91
SMC4-219ENST00000487747 LPGAT1Q92604 370 aa3.15□□□□□ -1.91
SMC4-219ENST00000487747 CYYR1Q96J86 154 aa3.15□□□□□ -1.91
SMC4-219ENST00000487747 CNOT6LQ96LI5 555 aaKnown RBP3.15□□□□□ -1.91
SMC4-219ENST00000487747 SFXN2Q96NB2 322 aa3.15□□□□□ -1.91
SMC4-219ENST00000487747 GTSE1Q9NYZ3 720 aa3.15□□□□□ -1.91
SMC4-219ENST00000487747 B4GALT7Q9UBV7 327 aa3.15□□□□□ -1.91
SMC4-219ENST00000487747 ZNF215Q9UL58 517 aaPredicted RBP3.15□□□□□ -1.91
SMC4-219ENST00000487747 ABT1Q9ULW3 272 aaKnown RBP3.15□□□□□ -1.91
SMC4-219ENST00000487747 VSIG4Q9Y279 399 aa3.15□□□□□ -1.91
SMC4-219ENST00000487747 NEMP2A6NFY4 417 aa3.14□□□□□ -1.91
SMC4-219ENST00000487747 ATP1B1P05026 303 aa3.14□□□□□ -1.91
SMC4-219ENST00000487747 NRIP1P48552 1158 aa3.14□□□□□ -1.91
SMC4-219ENST00000487747 ARF3P61204 181 aaPredicted RBP3.14□□□□□ -1.91
SMC4-219ENST00000487747 ARF1P84077 181 aaKnown RBP3.14□□□□□ -1.91
SMC4-219ENST00000487747 MYL7Q01449 175 aa3.14□□□□□ -1.91
SMC4-219ENST00000487747 POU5F1Q01860 360 aaKnown RBP3.14□□□□□ -1.91
SMC4-219ENST00000487747 FAM166AQ6J272 317 aa3.14□□□□□ -1.91
SMC4-219ENST00000487747 OR4N5Q8IXE1 308 aa3.14□□□□□ -1.91
SMC4-219ENST00000487747 FGFRL1Q8N441 504 aa3.14□□□□□ -1.91
SMC4-219ENST00000487747 GUF1Q8N442 669 aaKnown RBP3.14□□□□□ -1.91
SMC4-219ENST00000487747 POC5Q8NA72 575 aa3.14□□□□□ -1.91
SMC4-219ENST00000487747 OR5T2Q8NGG2 359 aa3.14□□□□□ -1.91
SMC4-219ENST00000487747 SLAMF9Q96A28 289 aa3.14□□□□□ -1.91
SMC4-219ENST00000487747 FAM71F1Q96KD3 344 aaPredicted RBP3.14□□□□□ -1.91
SMC4-219ENST00000487747 CCDC28BQ9BUN5 200 aa3.14□□□□□ -1.91
SMC4-219ENST00000487747 Q9H8V8 135 aa3.14□□□□□ -1.91
SMC4-219ENST00000487747 PSD3Q9NYI0 1048 aa3.14□□□□□ -1.91
SMC4-219ENST00000487747 BAIAP2L1Q9UHR4 511 aa3.14□□□□□ -1.91
SMC4-219ENST00000487747 PA2G4Q9UQ80 394 aaKnown RBP3.14□□□□□ -1.91
SMC4-219ENST00000487747 CCL24O00175 119 aa3.13□□□□□ -1.91
SMC4-219ENST00000487747 ECE2O60344 883 aa3.13□□□□□ -1.91
SMC4-219ENST00000487747 DOK2O60496 412 aa3.13□□□□□ -1.91
SMC4-219ENST00000487747 GJB3O75712 270 aa3.13□□□□□ -1.91
SMC4-219ENST00000487747 ZBTB25P24278 435 aa3.13□□□□□ -1.91
SMC4-219ENST00000487747 GCH1P30793 250 aa3.13□□□□□ -1.91
SMC4-219ENST00000487747 ALDH1B1P30837 517 aa3.13□□□□□ -1.91
SMC4-219ENST00000487747 KHKP50053 298 aa3.13□□□□□ -1.91
SMC4-219ENST00000487747 ATP4BP51164 291 aa3.13□□□□□ -1.91
SMC4-219ENST00000487747 VEZF1Q14119 521 aa3.13□□□□□ -1.91
SMC4-219ENST00000487747 ZNF146Q15072 292 aa3.13□□□□□ -1.91
SMC4-219ENST00000487747 PHKG1Q16816 387 aa3.13□□□□□ -1.91
SMC4-219ENST00000487747 DUSP28Q4G0W2 176 aa3.13□□□□□ -1.91
SMC4-219ENST00000487747 MCMDC2Q4G0Z9 681 aa3.13□□□□□ -1.91
SMC4-219ENST00000487747 MFSD12Q6NUT3 480 aa3.13□□□□□ -1.91
SMC4-219ENST00000487747 IL17RELQ6ZVW7 336 aa3.13□□□□□ -1.91
SMC4-219ENST00000487747 OR4K1Q8NGD4 311 aa3.13□□□□□ -1.91
SMC4-219ENST00000487747 SSC4DQ8WTU2 575 aa3.13□□□□□ -1.91
SMC4-219ENST00000487747 HDAC2Q92769 488 aaKnown RBP3.13□□□□□ -1.91
SMC4-219ENST00000487747 NXNL1Q96CM4 212 aa3.13□□□□□ -1.91
SMC4-219ENST00000487747 PSMD1Q99460 953 aa3.13□□□□□ -1.91
SMC4-219ENST00000487747 MTHFD2LQ9H903 347 aaPredicted RBP3.13□□□□□ -1.91
SMC4-219ENST00000487747 TNFRSF19Q9NS68 423 aa3.13□□□□□ -1.91
SMC4-219ENST00000487747 LNPEPQ9UIQ6 1025 aa3.13□□□□□ -1.91
SMC4-219ENST00000487747 CHKBQ9Y259 395 aa3.13□□□□□ -1.91
SMC4-219ENST00000487747 KIF25-AS1Q9Y6Z4 181 aa3.13□□□□□ -1.91
SMC4-219ENST00000487747 UMODL1Q5DID0 1318 aa3.13□□□□□ -1.91
SMC4-219ENST00000487747 IGHV3-38A0A0C4DH36 116 aa3.12□□□□□ -1.91
SMC4-219ENST00000487747 EPB41L2O43491 1005 aaKnown RBP3.12□□□□□ -1.91
SMC4-219ENST00000487747 PRDM1O75626 825 aa3.12□□□□□ -1.91
SMC4-219ENST00000487747 AOC1P19801 751 aa3.12□□□□□ -1.91
SMC4-219ENST00000487747 ELAVL4P26378 380 aaKnown RBP3.12□□□□□ -1.91
SMC4-219ENST00000487747 VAMP7P51809 220 aa3.12□□□□□ -1.91
SMC4-219ENST00000487747 PRELPP51888 382 aa3.12□□□□□ -1.91
SMC4-219ENST00000487747 KLC1Q07866 573 aa3.12□□□□□ -1.91
SMC4-219ENST00000487747 PCLAFQ15004 111 aa3.12□□□□□ -1.91
SMC4-219ENST00000487747 FAAH2Q6GMR7 532 aa3.12□□□□□ -1.91
SMC4-219ENST00000487747 FAM180BQ6P0A1 224 aa3.12□□□□□ -1.91
SMC4-219ENST00000487747 C3P1Q6ZMU1 363 aa3.12□□□□□ -1.91
SMC4-219ENST00000487747 SZRD1Q7Z422 152 aa3.12□□□□□ -1.91
SMC4-219ENST00000487747 ADCK1Q86TW2 530 aa3.12□□□□□ -1.91
SMC4-219ENST00000487747 LINC00346Q8IVM7 164 aa3.12□□□□□ -1.91
SMC4-219ENST00000487747 ZBED8Q8IZ13 594 aa3.12□□□□□ -1.91
SMC4-219ENST00000487747 CD177Q8N6Q3 437 aa3.12□□□□□ -1.91
SMC4-219ENST00000487747 SPACA9Q96E40 222 aaPredicted RBP3.12□□□□□ -1.91
SMC4-219ENST00000487747 CALML4Q96GE6 196 aa3.12□□□□□ -1.91
SMC4-219ENST00000487747 MAK16Q9BXY0 300 aaKnown RBP3.12□□□□□ -1.91
SMC4-219ENST00000487747 ZMYND12Q9H0C1 365 aa3.12□□□□□ -1.91
SMC4-219ENST00000487747 GOLPH3LQ9H4A5 285 aa3.12□□□□□ -1.91
SMC4-219ENST00000487747 POMT2Q9UKY4 750 aa3.12□□□□□ -1.91
SMC4-219ENST00000487747 RNF150Q9ULK6 438 aa3.12□□□□□ -1.91
SMC4-219ENST00000487747 ZNF256Q9Y2P7 627 aaPredicted RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms