RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 CDK2AP2O75956 126 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 RLN1P04808 185 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 FAM157CP0CG43 387 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 PRSS56P0CW18 603 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 WNT5AP41221 380 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 GLIPR1P48060 266 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 RGS7P49802 495 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 CRIP2P52943 208 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 MFAP3P55082 362 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 UBASH3AP57075 661 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 SNRPD1P62314 119 aaKnown RBP3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 TAF10Q12962 218 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 NONOQ15233 471 aaKnown RBP eCLIP3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 PTGISQ16647 500 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 SGSM1Q2NKQ1 1148 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 ODF2Q5BJF6 829 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 FUT10Q6P4F1 479 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 NOTUMQ6P988 496 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 DCLRE1AQ6PJP8 1040 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 SUSD1Q6UWL2 747 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 TMCO5AQ8N6Q1 288 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 NKAIN3Q8N8D7 197 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 MAPKAPK5-AS1Q8N8E1 139 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 TMEM178AQ8NBL3 297 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 KBTBD8Q8NFY9 601 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 HEXDCQ8WVB3 486 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 PIGBQ92521 554 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 ARHGAP45Q92619 1136 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 NSMAFQ92636 917 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 ZNF524Q96C55 264 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 MAGED4Q96JG8 741 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 F2RL3Q96RI0 385 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 NKX3-1Q99801 234 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 FSD1Q9BTV5 496 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 CDK19Q9BWU1 502 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 BARHL1Q9BZE3 327 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 OR2B2Q9GZK3 357 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 EGLN1Q9GZT9 426 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 NYXQ9GZU5 481 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 SDCBP2Q9H190 292 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 ST6GALNAC4Q9H4F1 302 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 Q9H8V8 135 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 DDX43Q9NXZ2 648 aaKnown RBP3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 VPS18Q9P253 973 aa3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 ARMCX3Q9UH62 379 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P36-201ENST00000487709 IGHV4-4A0A075B6R2 117 aa3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 EDIL3O43854 480 aa3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 EXTL3O43909 919 aa3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 ZG16O60844 167 aa3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 KRT33AO76009 404 aa3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 GSRP00390 522 aa3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 ERVK-10P10266 1014 aa3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 DARSP14868 501 aaKnown RBP3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 ADRA2CP18825 462 aa3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 LHCGRP22888 699 aa3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 ATP5DP30049 168 aa3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 TIMP3P35625 211 aa3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 KRT2P35908 639 aa3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 CRKLP46109 303 aaKnown RBP3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 PMP22Q01453 160 aa3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 TNK1Q13470 666 aa3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 HNRNPDQ14103 355 aaKnown RBP3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 ARMC3Q5W041 872 aa3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 LYSMD4Q5XG99 296 aa3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 MACC1Q6ZN28 852 aa3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 MARK2Q7KZI7 788 aaKnown RBP3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 KIRREL3Q8IZU9 778 aa3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 CIARTQ8N365 385 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 BMPERQ8N8U9 685 aa3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 SLC37A3Q8NCC5 494 aa3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 Q8NFD4 153 aa3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 OR10Q1Q8NGQ4 319 aa3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 FAM76AQ8TAV0 307 aa3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 HCAR2Q8TDS4 363 aa3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 UBLCP1Q8WVY7 318 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 RAD54LQ92698 747 aa3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 DNASE1L2Q92874 299 aa3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 BSCL2Q96G97 398 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 JAKMIP1Q96N16 626 aaKnown RBP3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 BTBD9Q96Q07 612 aa3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 MAP3K3Q99759 626 aa3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 SLC2A11Q9BYW1 496 aa3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 ACTL8Q9H568 366 aa3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 TLE6Q9H808 572 aa3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 EXOC1Q9NV70 894 aa3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 C2orf42Q9NWW7 574 aa3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 ITM2BQ9Y287 266 aa3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 SELENOKQ9Y6D0 94 aa3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 R4GN57 208 aa3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 IL16Q14005 1332 aa3.37□□□□□ -1.87
HMGB1P36-201ENST00000487709 OOEPA6NGQ2 149 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 CASTOR2A6NHX0 329 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 YDJCA8MPS7 323 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 TMEM150CB9EJG8 249 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 H0Y626 953 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 H0YAE9 185 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 FLRT2O43155 660 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 PPIP5K2O43314 1243 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 ATP6AP2O75787 350 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 FAM58BPP0C7Q3 252 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms