RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 ZNF460Q14592 562 aa21.43■■□□□ 1.02
CDHR3-212ENST00000487084 NKAIN1Q4KMZ8 207 aa21.43■■□□□ 1.02
CDHR3-212ENST00000487084 PRAMEF13Q5VWM6 474 aa21.43■■□□□ 1.02
CDHR3-212ENST00000487084 LRRC56Q8IYG6 542 aaPredicted RBP21.43■■□□□ 1.02
CDHR3-212ENST00000487084 METTL27Q8N6F8 245 aaPredicted RBP21.43■■□□□ 1.02
CDHR3-212ENST00000487084 VPS39Q96JC1 886 aa21.43■■□□□ 1.02
CDHR3-212ENST00000487084 DHRS4Q9BTZ2 278 aa21.43■■□□□ 1.02
CDHR3-212ENST00000487084 TRIM54Q9BYV2 358 aa21.43■■□□□ 1.02
CDHR3-212ENST00000487084 FAM117AQ9C073 453 aa21.43■■□□□ 1.02
CDHR3-212ENST00000487084 CUEDC1Q9NWM3 386 aaPredicted RBP21.43■■□□□ 1.02
CDHR3-212ENST00000487084 ARL15Q9NXU5 204 aa21.43■■□□□ 1.02
CDHR3-212ENST00000487084 SEC16AO15027 2179 aa21.42■■□□□ 1.02
CDHR3-212ENST00000487084 KALRNO60229 2985 aa21.42■■□□□ 1.02
CDHR3-212ENST00000487084 ZNF37AP17032 561 aaPredicted RBP21.42■■□□□ 1.02
CDHR3-212ENST00000487084 MAGEA4P43358 317 aa21.42■■□□□ 1.02
CDHR3-212ENST00000487084 TAS2R39P59534 338 aa21.42■■□□□ 1.02
CDHR3-212ENST00000487084 GPX6P59796 221 aa21.42■■□□□ 1.02
CDHR3-212ENST00000487084 GUCY2DQ02846 1103 aa21.42■■□□□ 1.02
CDHR3-212ENST00000487084 FBXO42Q6P3S6 717 aa21.42■■□□□ 1.02
CDHR3-212ENST00000487084 AGTRAPQ6RW13 159 aa21.42■■□□□ 1.02
CDHR3-212ENST00000487084 TMEM207Q6UWW9 146 aa21.42■■□□□ 1.02
CDHR3-212ENST00000487084 PAQR7Q86WK9 346 aa21.42■■□□□ 1.02
CDHR3-212ENST00000487084 CTAGE3PQ8IX95 158 aa21.42■■□□□ 1.02
CDHR3-212ENST00000487084 THAP4Q8WY91 577 aa21.42■■□□□ 1.02
CDHR3-212ENST00000487084 ZNF285Q96NJ3 590 aa21.42■■□□□ 1.02
CDHR3-212ENST00000487084 PHACTR1Q9C0D0 580 aa21.42■■□□□ 1.02
CDHR3-212ENST00000487084 SLC25A18Q9H1K4 315 aa21.42■■□□□ 1.02
CDHR3-212ENST00000487084 PTRH2Q9Y3E5 179 aaKnown RBP21.42■■□□□ 1.02
CDHR3-212ENST00000487084 KIF2AO00139 706 aaPredicted RBP21.41■■□□□ 1.02
CDHR3-212ENST00000487084 DSCR3O14972 297 aa21.41■■□□□ 1.02
CDHR3-212ENST00000487084 GUCA1CO95843 209 aa21.41■■□□□ 1.02
CDHR3-212ENST00000487084 GSTA2P09210 222 aa21.41■■□□□ 1.02
CDHR3-212ENST00000487084 GCGRP47871 477 aa21.41■■□□□ 1.02
CDHR3-212ENST00000487084 NAE1Q13564 534 aa21.41■■□□□ 1.02
CDHR3-212ENST00000487084 FAM214AQ32MH5 1076 aa21.41■■□□□ 1.02
CDHR3-212ENST00000487084 YOD1Q5VVQ6 348 aaPredicted RBP21.41■■□□□ 1.02
CDHR3-212ENST00000487084 ZNF425Q6IV72 752 aa21.41■■□□□ 1.02
CDHR3-212ENST00000487084 NKAPQ8N5F7 415 aaKnown RBP21.41■■□□□ 1.02
CDHR3-212ENST00000487084 MNS1Q8NEH6 495 aa21.41■■□□□ 1.02
CDHR3-212ENST00000487084 RERGQ96A58 199 aaPredicted RBP21.41■■□□□ 1.02
CDHR3-212ENST00000487084 IKZF3Q9UKT9 509 aa21.41■■□□□ 1.02
CDHR3-212ENST00000487084 HYKKA2RU49 373 aa21.4■■□□□ 1.02
CDHR3-212ENST00000487084 FITM1A5D6W6 292 aa21.4■■□□□ 1.02
CDHR3-212ENST00000487084 NPEPPSL1A6NEC2 478 aa21.4■■□□□ 1.02
CDHR3-212ENST00000487084 ARGFXA6NJG6 315 aa21.4■■□□□ 1.02
CDHR3-212ENST00000487084 H0YGG7 62 aa21.4■■□□□ 1.02
CDHR3-212ENST00000487084 H7BY64 318 aa21.4■■□□□ 1.02
CDHR3-212ENST00000487084 HAT1O14929 419 aa21.4■■□□□ 1.02
CDHR3-212ENST00000487084 RFPL1O75677 317 aa21.4■■□□□ 1.02
CDHR3-212ENST00000487084 TUBB4AP04350 444 aa21.4■■□□□ 1.02
CDHR3-212ENST00000487084 EZRP15311 586 aaKnown RBP21.4■■□□□ 1.02
CDHR3-212ENST00000487084 OTX2P32243 289 aa21.4■■□□□ 1.02
CDHR3-212ENST00000487084 FOLR3P41439 243 aa21.4■■□□□ 1.02
CDHR3-212ENST00000487084 PMS2P54278 862 aa21.4■■□□□ 1.02
CDHR3-212ENST00000487084 FOXL2P58012 376 aa21.4■■□□□ 1.02
CDHR3-212ENST00000487084 ARF3P61204 181 aaPredicted RBP21.4■■□□□ 1.02
CDHR3-212ENST00000487084 CHAF1BQ13112 559 aa21.4■■□□□ 1.02
CDHR3-212ENST00000487084 CPZQ66K79 652 aa21.4■■□□□ 1.02
CDHR3-212ENST00000487084 PLD3Q8IV08 490 aa21.4■■□□□ 1.02
CDHR3-212ENST00000487084 CEP97Q8IW35 865 aa21.4■■□□□ 1.02
CDHR3-212ENST00000487084 CSNK1A1LQ8N752 337 aa21.4■■□□□ 1.02
CDHR3-212ENST00000487084 C9orf43Q8TAL5 461 aaPredicted RBP21.4■■□□□ 1.02
CDHR3-212ENST00000487084 ZDHHC19Q8WVZ1 309 aaPredicted RBP21.4■■□□□ 1.02
CDHR3-212ENST00000487084 CABS1Q96KC9 395 aa21.4■■□□□ 1.02
CDHR3-212ENST00000487084 PRAP1Q96NZ9 151 aa21.4■■□□□ 1.02
CDHR3-212ENST00000487084 CPNE1Q99829 537 aa21.4■■□□□ 1.02
CDHR3-212ENST00000487084 PCBD2Q9H0N5 130 aa21.4■■□□□ 1.02
CDHR3-212ENST00000487084 GPAMQ9HCL2 828 aa21.4■■□□□ 1.02
CDHR3-212ENST00000487084 ZNF71Q9NQZ8 489 aaPredicted RBP21.4■■□□□ 1.02
CDHR3-212ENST00000487084 TUBD1Q9UJT1 453 aa21.4■■□□□ 1.02
CDHR3-212ENST00000487084 MTO1Q9Y2Z2 717 aaKnown RBP21.4■■□□□ 1.02
CDHR3-212ENST00000487084 HEMK1Q9Y5R4 338 aaPredicted RBP21.4■■□□□ 1.02
CDHR3-212ENST00000487084 MAU2Q9Y6X3 613 aa21.4■■□□□ 1.02
CDHR3-212ENST00000487084 COL6A6A6NMZ7 2263 aa21.39■■□□□ 1.02
CDHR3-212ENST00000487084 CTAGE15A4D2H0 777 aa21.39■■□□□ 1.01
CDHR3-212ENST00000487084 FAM159BA6NKW6 160 aa21.39■■□□□ 1.01
CDHR3-212ENST00000487084 DNAJB5O75953 348 aa21.39■■□□□ 1.01
CDHR3-212ENST00000487084 CTAGE8P0CG41 777 aa21.39■■□□□ 1.01
CDHR3-212ENST00000487084 ITGAXP20702 1163 aa21.39■■□□□ 1.01
CDHR3-212ENST00000487084 STX2P32856 288 aa21.39■■□□□ 1.01
CDHR3-212ENST00000487084 AP1S2P56377 157 aa21.39■■□□□ 1.01
CDHR3-212ENST00000487084 CAPN13Q6MZZ7 669 aaPredicted RBP21.39■■□□□ 1.01
CDHR3-212ENST00000487084 ZNF605Q86T29 641 aa21.39■■□□□ 1.01
CDHR3-212ENST00000487084 CTAGE6Q86UF2 777 aa21.39■■□□□ 1.01
CDHR3-212ENST00000487084 RAB43Q86YS6 212 aa21.39■■□□□ 1.01
CDHR3-212ENST00000487084 CTAGE4Q8IX94 777 aa21.39■■□□□ 1.01
CDHR3-212ENST00000487084 MMGT1Q8N4V1 131 aa21.39■■□□□ 1.01
CDHR3-212ENST00000487084 DTWD1Q8N5C7 304 aa21.39■■□□□ 1.01
CDHR3-212ENST00000487084 PPM1NQ8N819 430 aa21.39■■□□□ 1.01
CDHR3-212ENST00000487084 NOA1Q8NC60 698 aaKnown RBP21.39■■□□□ 1.01
CDHR3-212ENST00000487084 ADAMTS17Q8TE56 1095 aa21.39■■□□□ 1.01
CDHR3-212ENST00000487084 ABHD17AQ96GS6 310 aa21.39■■□□□ 1.01
CDHR3-212ENST00000487084 CAB39LQ9H9S4 337 aa21.39■■□□□ 1.01
CDHR3-212ENST00000487084 LRRC4CQ9HCJ2 640 aa21.39■■□□□ 1.01
CDHR3-212ENST00000487084 SH2B3Q9UQQ2 575 aa21.39■■□□□ 1.01
CDHR3-212ENST00000487084 FER1L5A0AVI2 2057 aa21.38■■□□□ 1.01
CDHR3-212ENST00000487084 B8ZZF3 427 aa21.38■■□□□ 1.01
CDHR3-212ENST00000487084 MKRN2OSH3BPM6 223 aa21.38■■□□□ 1.01
CDHR3-212ENST00000487084 CDC7O00311 574 aa21.38■■□□□ 1.01
CDHR3-212ENST00000487084 KLF7O75840 302 aaPredicted RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms