RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 PRR20CP86479 221 aa13.77□□□□□ -0.21
CLDN11-207ENST00000486975 PRR20DP86480 221 aa13.77□□□□□ -0.21
CLDN11-207ENST00000486975 PRR20BP86481 221 aa13.77□□□□□ -0.21
CLDN11-207ENST00000486975 PRR20AP86496 221 aa13.77□□□□□ -0.21
CLDN11-207ENST00000486975 MPP1Q00013 466 aa13.77□□□□□ -0.21
CLDN11-207ENST00000486975 TAP2Q03519 686 aa13.77□□□□□ -0.21
CLDN11-207ENST00000486975 DHX9Q08211 1270 aaKnown RBP13.77□□□□□ -0.21
CLDN11-207ENST00000486975 MORF4L2Q15014 288 aa13.77□□□□□ -0.21
CLDN11-207ENST00000486975 NKG7Q16617 165 aa13.77□□□□□ -0.21
CLDN11-207ENST00000486975 PRTGQ2VWP7 1150 aa13.77□□□□□ -0.21
CLDN11-207ENST00000486975 VWA5B1Q5TIE3 1220 aa13.77□□□□□ -0.21
CLDN11-207ENST00000486975 ICE2Q659A1 982 aa13.77□□□□□ -0.21
CLDN11-207ENST00000486975 ZNF425Q6IV72 752 aa13.77□□□□□ -0.21
CLDN11-207ENST00000486975 UGT3A1Q6NUS8 523 aa13.77□□□□□ -0.21
CLDN11-207ENST00000486975 PRMT9Q6P2P2 845 aa13.77□□□□□ -0.21
CLDN11-207ENST00000486975 COX15Q7KZN9 410 aa13.77□□□□□ -0.21
CLDN11-207ENST00000486975 PAQR7Q86WK9 346 aa13.77□□□□□ -0.21
CLDN11-207ENST00000486975 CREG2Q8IUH2 290 aa13.77□□□□□ -0.21
CLDN11-207ENST00000486975 CLEC1AQ8NC01 280 aa13.77□□□□□ -0.21
CLDN11-207ENST00000486975 THAP11Q96EK4 314 aa13.77□□□□□ -0.21
CLDN11-207ENST00000486975 ACAT2Q9BWD1 397 aa13.77□□□□□ -0.21
CLDN11-207ENST00000486975 MRPS30Q9NP92 439 aaKnown RBP13.77□□□□□ -0.21
CLDN11-207ENST00000486975 IARS2Q9NSE4 1012 aaKnown RBP13.77□□□□□ -0.21
CLDN11-207ENST00000486975 LOC105369274A0A096LPK9 316 aa13.76□□□□□ -0.21
CLDN11-207ENST00000486975 LOC102723532A0A0G2JNH3 316 aa13.76□□□□□ -0.21
CLDN11-207ENST00000486975 A0A0J9YVX5 310 aa13.76□□□□□ -0.21
CLDN11-207ENST00000486975 CLEC18AA5D8T8 446 aa13.76□□□□□ -0.21
CLDN11-207ENST00000486975 VSTM2BA6NLU5 285 aa13.76□□□□□ -0.21
CLDN11-207ENST00000486975 AGPSO00116 658 aa13.76□□□□□ -0.21
CLDN11-207ENST00000486975 ZBTB14O43829 449 aa13.76□□□□□ -0.21
CLDN11-207ENST00000486975 F7P08709 466 aaPredicted RBP13.76□□□□□ -0.21
CLDN11-207ENST00000486975 EZRP15311 586 aaKnown RBP13.76□□□□□ -0.21
CLDN11-207ENST00000486975 CUL1Q13616 776 aa13.76□□□□□ -0.21
CLDN11-207ENST00000486975 MYBPC3Q14896 1274 aa13.76□□□□□ -0.21
CLDN11-207ENST00000486975 IGFBP7Q16270 282 aa13.76□□□□□ -0.21
CLDN11-207ENST00000486975 MUM1Q2TAK8 710 aa13.76□□□□□ -0.21
CLDN11-207ENST00000486975 MSS51Q4VC12 460 aa13.76□□□□□ -0.21
CLDN11-207ENST00000486975 FBXO42Q6P3S6 717 aa13.76□□□□□ -0.21
CLDN11-207ENST00000486975 SUSD1Q6UWL2 747 aa13.76□□□□□ -0.21
CLDN11-207ENST00000486975 CLEC18BQ6UXF7 455 aa13.76□□□□□ -0.21
CLDN11-207ENST00000486975 LRRC56Q8IYG6 542 aaPredicted RBP13.76□□□□□ -0.21
CLDN11-207ENST00000486975 CPNE9Q8IYJ1 553 aa13.76□□□□□ -0.21
CLDN11-207ENST00000486975 OR4N4Q8N0Y3 316 aa13.76□□□□□ -0.21
CLDN11-207ENST00000486975 PDIK1LQ8N165 341 aa13.76□□□□□ -0.21
CLDN11-207ENST00000486975 CLEC18CQ8NCF0 446 aa13.76□□□□□ -0.21
CLDN11-207ENST00000486975 ANP32BQ92688 251 aaKnown RBP13.76□□□□□ -0.21
CLDN11-207ENST00000486975 LRRC39Q96DD0 335 aa13.76□□□□□ -0.21
CLDN11-207ENST00000486975 MVB12AQ96EY5 273 aa13.76□□□□□ -0.21
CLDN11-207ENST00000486975 CERS2Q96G23 380 aa13.76□□□□□ -0.21
CLDN11-207ENST00000486975 PLAC1Q9HBJ0 212 aa13.76□□□□□ -0.21
CLDN11-207ENST00000486975 TAC3Q9UHF0 121 aa13.76□□□□□ -0.21
CLDN11-207ENST00000486975 TRMT6Q9UJA5 497 aaKnown RBP13.76□□□□□ -0.21
CLDN11-207ENST00000486975 PTPN13Q12923 2485 aa13.75□□□□□ -0.21
CLDN11-207ENST00000486975 IGLV3-12A0A075B6K2 115 aa13.75□□□□□ -0.21
CLDN11-207ENST00000486975 CCDC188H7C350 402 aa13.75□□□□□ -0.21
CLDN11-207ENST00000486975 ALPPP05187 535 aa13.75□□□□□ -0.21
CLDN11-207ENST00000486975 ERVK-10P10266 1014 aa13.75□□□□□ -0.21
CLDN11-207ENST00000486975 GABRB3P28472 473 aa13.75□□□□□ -0.21
CLDN11-207ENST00000486975 IMPA1P29218 277 aa13.75□□□□□ -0.21
CLDN11-207ENST00000486975 RGS4P49798 205 aa13.75□□□□□ -0.21
CLDN11-207ENST00000486975 GNG11P61952 73 aa13.75□□□□□ -0.21
CLDN11-207ENST00000486975 TIAL1Q01085 375 aaKnown RBP eCLIP13.75□□□□□ -0.21
CLDN11-207ENST00000486975 SP140Q13342 867 aa13.75□□□□□ -0.21
CLDN11-207ENST00000486975 FRG1Q14331 258 aaKnown RBP13.75□□□□□ -0.21
CLDN11-207ENST00000486975 NADK2Q4G0N4 442 aa13.75□□□□□ -0.21
CLDN11-207ENST00000486975 GARNL3Q5VVW2 1013 aa13.75□□□□□ -0.21
CLDN11-207ENST00000486975 HIBCHQ6NVY1 386 aaPredicted RBP13.75□□□□□ -0.21
CLDN11-207ENST00000486975 IGFL3Q6UXB1 125 aa13.75□□□□□ -0.21
CLDN11-207ENST00000486975 UBE2R2Q712K3 238 aaPredicted RBP13.75□□□□□ -0.21
CLDN11-207ENST00000486975 PIWIL4Q7Z3Z4 852 aaKnown RBP13.75□□□□□ -0.21
CLDN11-207ENST00000486975 ATCAYQ86WG3 371 aa13.75□□□□□ -0.21
CLDN11-207ENST00000486975 GALNT16Q8N428 558 aa13.75□□□□□ -0.21
CLDN11-207ENST00000486975 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.75□□□□□ -0.21
CLDN11-207ENST00000486975 VPS50Q96JG6 964 aa13.75□□□□□ -0.21
CLDN11-207ENST00000486975 C10orf90Q96M02 699 aa13.75□□□□□ -0.21
CLDN11-207ENST00000486975 OR2A5Q96R48 311 aa13.75□□□□□ -0.21
CLDN11-207ENST00000486975 NAPGQ99747 312 aaPredicted RBP13.75□□□□□ -0.21
CLDN11-207ENST00000486975 ZNF304Q9HCX3 659 aa13.75□□□□□ -0.21
CLDN11-207ENST00000486975 ATP13A2Q9NQ11 1180 aa13.75□□□□□ -0.21
CLDN11-207ENST00000486975 SEMA3GQ9NS98 782 aa13.75□□□□□ -0.21
CLDN11-207ENST00000486975 TAS2R13Q9NYV9 303 aa13.75□□□□□ -0.21
CLDN11-207ENST00000486975 RNF14Q9UBS8 474 aa13.75□□□□□ -0.21
CLDN11-207ENST00000486975 CTSFQ9UBX1 484 aa13.75□□□□□ -0.21
CLDN11-207ENST00000486975 ZC3H7BQ9UGR2 993 aaKnown RBP13.75□□□□□ -0.21
CLDN11-207ENST00000486975 CORO1CQ9ULV4 474 aaPredicted RBP13.75□□□□□ -0.21
CLDN11-207ENST00000486975 PLAAQ9Y263 795 aa13.75□□□□□ -0.21
CLDN11-207ENST00000486975 SAR1BQ9Y6B6 198 aa13.75□□□□□ -0.21
CLDN11-207ENST00000486975 LRRK2Q5S007 2527 aa13.75□□□□□ -0.21
CLDN11-207ENST00000486975 FLNCQ14315 2725 aa13.75□□□□□ -0.21
CLDN11-207ENST00000486975 PCM1Q15154 2024 aa13.74□□□□□ -0.21
CLDN11-207ENST00000486975 HECTD1Q9ULT8 2610 aa13.74□□□□□ -0.21
CLDN11-207ENST00000486975 A6NL46 340 aa13.74□□□□□ -0.21
CLDN11-207ENST00000486975 TTLL8A6PVC2 850 aa13.74□□□□□ -0.21
CLDN11-207ENST00000486975 H0YGG7 62 aa13.74□□□□□ -0.21
CLDN11-207ENST00000486975 TXNDC9O14530 226 aa13.74□□□□□ -0.21
CLDN11-207ENST00000486975 SLC16A5O15375 505 aa13.74□□□□□ -0.21
CLDN11-207ENST00000486975 PRPF4O43172 522 aaKnown RBP eCLIP13.74□□□□□ -0.21
CLDN11-207ENST00000486975 BANF1O75531 89 aa13.74□□□□□ -0.21
CLDN11-207ENST00000486975 IPO13O94829 963 aaKnown RBP13.74□□□□□ -0.21
CLDN11-207ENST00000486975 MED26O95402 600 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms